Alteromonas mediterranea DE: MADE_1015140
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Entry
MADE_1015140 CDS
T00747
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
amc
Alteromonas mediterranea DE
Pathway
amc00470
D-Amino acid metabolism
amc00550
Peptidoglycan biosynthesis
amc01100
Metabolic pathways
amc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MADE_1015140 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MADE_1015140 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MADE_1015140 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
MADE_1015140 (ddl)
Enzymes [BR:
amc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MADE_1015140 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
amc01011
]
Precursor biosynthesis
Amino acid ligase
MADE_1015140 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
GARS_A
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AEA99162
UniProt:
F2GD15
LinkDB
All DBs
Position
complement(3360418..3361386)
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AA seq
322 aa
AA seq
DB search
MFKPSVSTHSPEKYGKVAVLLGGDSAEREVSLNSGNAVLNALLRQGVNAFAFDPAERPLN
DLLSLDVDRALIMLHGRGGEDGAMQGALQFLKIPYTGSRVLGSALAMDKIHTKQVWQSLG
LPTAKYEIADKRHFEAGKCSAIMDKLGNEVMVKPAREGSSIGMARVTSAKQLETAIQDAF
KYDNQVLLEQYIDGPEFTVSVIQGQALPSIRMSTPHTFYDYAAKYQDNTTEYYCPSGLSE
EQEAQLAKLASRAFDAISGSGWGRIDVMQDNQRQFYLLEANTVPGMTEKSLVPKAAKVAG
LTFDELVLSILSTSFDDVANKA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaccttcagtaagtacacactcacctgaaaagtatgggaaagtagctgtactt
ttaggtggtgactcggccgagcgtgaagtatcgctaaattcggggaatgcggtgctaaac
gcactgttaagacaaggggtaaatgcatttgcctttgaccccgcagagcgcccacttaac
gatttgctgtcgctagatgttgatagagccctcattatgcttcacggtcgtggcggtgaa
gatggcgctatgcagggggctcttcagtttttaaaaataccctacacgggaagccgagtt
ttaggctctgcgctggcaatggataaaattcatactaagcaagtgtggcaaagtttaggt
ttacccactgcaaaatatgaaattgctgataaaaggcactttgaagctggtaagtgcagc
gctataatggataaattggggaatgaagtcatggtaaaaccggccagagaagggtcgagt
attggcatggcaagagtgacaagcgctaaacaactcgaaactgccattcaggacgctttt
aaatacgataatcaagtcctgttagagcagtatatagacggccccgaattcactgtttct
gtgatacaggggcaggcgttgccgtctattcgcatgtctactccacatacattctatgat
tatgctgcgaaatatcaggataatacaacagaatactattgcccaagcggtttgtctgaa
gagcaagaagcacagcttgcaaagttagcttctcgtgcgtttgatgctatttcaggcagc
ggttggggcagaattgatgttatgcaggacaatcaaaggcagttttatttgctagaggca
aatacagtgcctggcatgacagaaaaaagtttggtgcctaaagcggccaaagttgcaggc
ttaacgtttgacgagttggtgttgagtattctttcgaccagctttgatgatgttgcaaat
aaggcgtag
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