Amycolatopsis mediterranei U32: AMED_1196
Help
Entry
AMED_1196 CDS
T01269
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00250
Alanine, aspartate and glutamate metabolism
amd00280
Valine, leucine and isoleucine degradation
amd00310
Lysine degradation
amd00410
beta-Alanine metabolism
amd00640
Propanoate metabolism
amd00650
Butanoate metabolism
amd01100
Metabolic pathways
amd01120
Microbial metabolism in diverse environments
Module
amd_M00027
GABA (gamma-Aminobutyrate) shunt
amd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AMED_1196 (gabT)
00650 Butanoate metabolism
AMED_1196 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AMED_1196 (gabT)
00280 Valine, leucine and isoleucine degradation
AMED_1196 (gabT)
00310 Lysine degradation
AMED_1196 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AMED_1196 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amd01007
]
AMED_1196 (gabT)
Enzymes [BR:
amd01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
AMED_1196 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
AMED_1196 (gabT)
2.6.1.48 5-aminovalerate transaminase
AMED_1196 (gabT)
Amino acid related enzymes [BR:
amd01007
]
Aminotransferase (transaminase)
Class III
AMED_1196 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ADJ43011
UniProt:
A0A0H3D0G9
LinkDB
All DBs
Position
complement(1263020..1264375)
Genome browser
AA seq
451 aa
AA seq
DB search
MTASTTAGPQAPAPRQRRLQTEIPGPLSRELQQRRAAAVAAGVSSVLPVYVTSASGGLLT
DADGNVLIDFGSGIAVTNVGHSAPAVVDRVRKQACWFTHTCFMVTPYEGYVEVCEALAEL
TPGDHAKKSVLFNSGAEAVENAVKIARVATGRQAVVVFDHAYHGRTNLTMGMTAKSVPYK
HGFGPFAPELYRVPGSYPFRDGLSGPEAAALAIDRIEKQIGGDQVAAVVLEPIQGEGGFI
EPARGFLPAIAAWCRENGVVYVADEVQTGFCRTGSWFASTDEDVVPDLIATAKGIAGGLP
LSAVTGRAALLDAVGPGGLGGTYGGNPIACAAALGSIETMKTEHLAASAKRIEGVVLPRL
RALASETGVIGDVRGRGAMLAAEFVKPGSAEPDADLTKRVAAACHRAGVVVLTCGTYGNV
VRLLPPLSLADDLLDEGLSVLEHAVRTEVRA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaagcaccaccgccgggccgcaggcgccggcgccccgccagcgcaggctgcag
accgaaatccccggccccctctcgcgtgagctgcagcagcgccgcgccgccgccgtcgcc
gccggggtcagctcggtgctgcccgtctacgtcacctccgccagcggcgggctgctcacc
gacgccgacggcaacgtgctgatcgacttcggctccggcatcgcggtgaccaacgtcggg
cactccgcgccggcggtggtcgaccgcgtccgcaagcaggcctgctggttcacccacacc
tgtttcatggtcacgccgtacgaggggtacgtcgaagtctgcgaagcgctggccgagctg
acccccggcgaccacgcgaagaagtcggtgctgttcaactcgggcgccgaggccgtcgag
aacgctgtcaagatcgcgcgggtcgcgaccggacgccaggccgtcgtcgtgttcgaccac
gcctaccacggccgcaccaacctcacgatgggcatgaccgcgaaatccgtgccctacaag
cacgggttcggcccgttcgcgcccgagctctaccgggtgccgggctcgtacccgttccgc
gacggcctgtccggccccgaagcggcggcgctggccatcgaccggatcgagaagcagatc
ggcggcgaccaggtggccgcggtggtcctggagccgatccagggcgagggcggcttcatc
gagcccgcgcgcggcttcctgcccgcgatcgcggcgtggtgccgcgaaaacggcgtcgtg
tacgtcgccgacgaggtccagaccggcttctgccgcaccggttcgtggttcgcctccacc
gacgaagacgtggtgccggacctgatcgcgacggccaagggcatcgcgggcggcctgccg
ctgtccgccgtcaccggccgcgctgccttgctggacgccgtcggcccgggtggtctcggc
gggacctacggcggcaacccgatcgcgtgcgccgcggcgctcggctcgatcgagacgatg
aagaccgagcacctcgccgcgtcggccaagcgcatcgaaggcgtcgtgctgccgcggctg
cgggcgctggcctcggaaacgggggtcatcggcgacgtccgcgggcgcggcgcgatgctg
gccgcggagttcgtcaagcccggttcggcggagccggacgccgacctcaccaagcgcgtc
gcggcggcctgtcaccgcgccggggtcgtggtgctgacctgcgggacctacggcaacgtc
gtccggctgctgccgccgctgtcgctggccgacgacctgctcgacgagggcctctcggtg
ctcgaacacgctgtccggacggaggtccgcgcatga
DBGET
integrated database retrieval system
