KEGG   Amycolatopsis mediterranei U32: AMED_1714
Entry
AMED_1714         CDS       T01269                                 
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
amd  Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:amd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amd03400]
    AMED_1714 (sbcD)
DNA repair and recombination proteins [BR:amd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AMED_1714 (sbcD)
    Archaeal homologous recombinant proteins
     AMED_1714 (sbcD)
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2
Other DBs
NCBI-ProteinID: ADJ43525
UniProt: A0A0H3CZL0
LinkDB
Position
1838698..1839858
AA seq 386 aa
MKFLHTSDWHIGKTLKGRNRLDEQRAVLGEIVRIARDGQFDAILVAGDLYETSAPSAAAQ
ELVVRALMALRETGAEVLAIAGNHDHAATFEAYRPLLKAAGIQLTGDPRPVHDGGVVSFD
ARSTGECVNVAVLPFLSQRYAVRAAELLAGTPADNVGEYDQRVRDILEHLKSGFTPGAVN
LVMAHLTVTGGTMGGGERAAQSIFEYHVPATAFGADPHYVALGHLHRRQSLPAACPVHYS
GSPFAVDFGEQDNTSVVLSVEVSPATPAKITDIPLAAGRKLRTVHGTVAELIARAGEFGE
DYLRVYLREATRAGLREEIQQALPNALEIRIDPEFAAPVPTSGGDRAIADRSPGELFASY
CAERTVEDKRVQALFARLHDEETSGV
NT seq 1161 nt   +upstreamnt  +downstreamnt
gtgaagttcctgcacacctccgactggcacatcggcaagacgctcaaggggcgcaaccgc
ctcgacgagcagcgggccgtgctcggcgagatcgtccggatcgcgcgggacgggcagttc
gacgcgatcctcgtcgcgggtgacctctacgagacgtcggcgccgtcggcggccgcgcag
gaactcgtggtgcgggcgttgatggcgctgcgcgaaaccggtgccgaggtgctcgccatc
gccgggaaccacgaccacgccgcgacgttcgaggcgtaccggccgctgctcaaggccgcg
ggcatccagctcaccggcgatccgcggccggtccacgacggcggcgtcgtctcgttcgac
gcgcgttcgacgggcgagtgcgtcaacgtcgccgtgctgcccttcctttcccagcgctac
gcggtccgcgccgccgagctgcttgccgggaccccggcggacaacgtcggcgagtacgac
cagcgcgtgcgcgacatcctggagcacctcaagtccggattcacccccggtgcggtgaac
ctcgtcatggcgcacctgacggtgaccggcgggacgatgggcggcggggaacgcgcggcg
cagtccatcttcgagtaccacgtgcccgcgacggcgttcggcgccgacccgcactacgtg
gcgctgggccacctgcaccggcgccagtcgctgcccgccgcgtgcccggtgcactacagc
ggttcgccgttcgccgtcgacttcggcgagcaggacaacaccagcgtcgtgctgtcggtg
gaggtgagtccggccacgccggcgaagatcaccgacatcccgttggccgccgggcggaaa
ctgcggacggtccacggcacggtggcggaactgatcgcccgcgcgggggagttcggcgag
gactacctccgcgtctaccttcgcgaagcgaccagggccgggctgcgggaggagatccag
caagccctgccgaacgccctggaaatccgcatcgacccggagttcgccgcgccggtgccg
acgtcgggcggcgaccgcgcgatcgcggaccgttcgccaggagagctcttcgcgagctac
tgcgcggaacgaaccgtcgaggacaagcgcgtgcaggcgctcttcgcgcggctgcacgac
gaagagacgagcggggtgtga

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