Amycolatopsis mediterranei U32: AMED_3760
Help
Entry
AMED_3760 CDS
T01269
Symbol
rpoE
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amd03021
]
AMED_3760 (rpoE)
Transcription machinery [BR:
amd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMED_3760 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
ADJ45539
UniProt:
A0A0H3D7M7
LinkDB
All DBs
Position
4088014..4088595
Genome browser
AA seq
193 aa
AA seq
DB search
MPVAQRFRRRRADEGDAGAPPPARLHAVGADVYPDWEAVYRDNVDRVYRLMFAKVGNRPD
AEDLTTEVFLTALRPLRVSASVGEVRAYLLATARTVLAGHWRRTLGREITTLDEEHDIAA
FEAGTVDPRTPARAEAILKQLPERYGRILRLRFLQACSLKEAAAELGITVGNAKVLQHRA
LRQAAQLAEGSQT
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtggcacagcggttccggcgcaggcgcgccgacgagggggacgcgggcgcgccg
ccgcccgcgcggctgcacgcggtcggcgcggacgtctacccggactgggaggcggtctac
cgcgacaacgtcgaccgcgtgtaccggctgatgttcgccaaggtgggcaaccggcccgac
gccgaagacctcaccacggaggtcttcctgaccgcgttgcggccgttgcgcgtctcggcg
agcgtgggcgaggtccgggcctacctgctggccaccgcgcgcacggtgctggccgggcac
tggcggcgcacgctcggccgggagatcaccaccctcgacgaggagcacgacatcgcggcc
ttcgaagcgggcaccgtcgacccgcgtacaccggcccgcgccgaggcgatcctcaagcag
ctgcccgagcggtacggccggatcctgcggctgcggttcctgcaggcctgctcgctcaag
gaagcggcggcggagctgggcatcaccgtcggcaacgcgaaggtgctgcagcaccgcgcg
ttgcggcaggccgcccagctggcggaagggagccagacgtga
DBGET
integrated database retrieval system
