Amycolatopsis mediterranei U32: AMED_5204
Help
Entry
AMED_5204 CDS
T01269
Symbol
lig
Name
(GenBank) ATP-dependent DNA ligase
Organism
amd
Amycolatopsis mediterranei U32
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ADJ46967
UniProt:
A0A0H3D9J5
LinkDB
All DBs
Position
complement(5775703..5776647)
Genome browser
AA seq
314 aa
AA seq
DB search
MTGPGWREPTLATLTDRRFSDEDWIFERKLDGVRAICVRDSGTPTLYSRNHKVMDNAYPE
IVEALAAQGGPRFVADGEIVAFDGANTSFAALQPRIHVSDPDRARATGVRVYYYLFDLLY
LDDRDTTALPLRQRKALLREAFGFADPLRLSAHRNTEGEKFFEEACRRGWEGVIAKRADA
PYHHGRSPDWLKFKCAQGQEFVIGGFTDPQGARHGFGALLLGYHDDDGLRYAGKVGTGFD
ERLLTSLHARLRDRETARSPFAGPVKEPGAHWVRPELVAQIGFSEWTRDGRLRHPRFAGL
REDKKAADVVRERA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggtcccggctggcgcgagccgaccctggccacgctcaccgaccgccggttctcc
gacgaggactggatcttcgagcgcaagctggacggcgtccgcgcgatctgcgtccgcgac
tccggaacgcccacgttgtactcgcgcaaccacaaggtgatggacaacgcctacccggag
atcgtcgaggccctcgccgcccagggcggcccgcggttcgtcgccgacggcgagatcgtc
gcgttcgacggtgccaacaccagcttcgccgcgctccagccccggatccacgtcagcgac
ccggatcgggcccgcgcgaccggcgtgcgcgtctactactacctgttcgacctgctgtac
ctcgacgaccgggacacgaccgcgctgccgctgcggcagcggaaggcgttgctgcgggag
gcgttcggcttcgcggacccgctccggctgtcggcgcaccgcaacaccgagggggagaag
ttcttcgaggaagcgtgccggcgcggctgggagggcgtcatcgccaagcgggcggacgcg
ccgtaccaccacgggcggtcacccgactggctgaagttcaagtgcgcgcagggccaggag
ttcgtcatcggcggcttcaccgacccgcagggtgcccgccacggcttcggcgcgctcctg
ctgggctaccacgatgacgacggcctccggtacgcgggcaaggtcggtaccggcttcgac
gagcggctgctgacgtcgttgcacgcgcggctgcgggaccgggagacggcgcggtcgccg
ttcgccgggccggtcaaggaaccgggggcgcactgggttcggccggagctggtggcgcag
atcggcttctccgagtggacgcgcgacgggcggctgcggcacccgcggttcgccgggctg
cgcgaggacaagaaggccgcggacgtcgtacgggagcgcgcgtga
DBGET
integrated database retrieval system