Amycolatopsis mediterranei U32: AMED_7949
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Entry
AMED_7949 CDS
T01269
Symbol
kgd
Name
(GenBank) 2-oxoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00020
Citrate cycle (TCA cycle)
amd00630
Glyoxylate and dicarboxylate metabolism
amd00785
Lipoic acid metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01200
Carbon metabolism
amd01210
2-Oxocarboxylic acid metabolism
Module
amd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMED_7949 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
AMED_7949 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMED_7949 (kgd)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AMED_7949 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
AMED_7949 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
AMED_7949 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
AMED_7949 (kgd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ADJ49654
UniProt:
A0A0H3DJ00
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All DBs
Position
8746223..8749873
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AA seq
1216 aa
AA seq
DB search
MYDQFLADPSSVDAAWHDFFADFKPTQSAQAKADTARQQQAGAKPAANGQAAQPSAKAVQ
NAESAAKQSSTAPAAKPAPAKAAPKQAPKPAAKAEPKAEAKKEEPESKQLRGAAAAIAKN
MDASLSVPTATSVRAVPAKLMADNRIVINNHLKRTRGGKISFTHLIGYAMVRALKAYPNM
NRHYQLIDGKPFAITPEHVNFGLAIDMKGKDGSRTLVVASIKGCEDMSFLQFWQAYEDIV
KKARNNKLTADDFSGTTISLTNPGGIGTNHSVPRLQAGQGAIIGVGAMQYPAAFEGTSEK
TLVDLGISKIMTLTSTYDHRIIQGAESGEFLKRIHQLLLGEDGFYDDVFTSLRLPYEPIR
WVADIPDGPVDKTARVIELIDAFRMRGHLMADTDPLNYRQRSHADLDVLSHGLTLWDLDR
EFPVGGFAGQERMKLRDILGVLRNSYCRTVGIEYTHILDPEERRWIQERVEIPHEKPDPA
VQKYVLSKLNAAEAFETFLQTKYVGQKRFSLEGGETAIPLLDTILDKAAEHELDEVVIGM
PHRGRLNVLANIVGKPISQIFQEFEGNLDPGQAHGSGDVKYHLGAEGKYFRMFGDGETKV
SLTANPSHLETVDPVLEGIVRAKQDILDKGGEGYTVLPVLMHGDAAFAGQGVVAETLNLS
LLRGYRTGGTVHVIVNNQVGFTTAPEHSRSSQYATDVAKMIGSPIFHVNGDDPEAAHWVA
KLAVEYRQAFHKDVVIDLICYRRRGHNEGDDPSMTQPAMYDIIDTKRSVRKTYTESLIGR
GDISVEEAEAALRDFSSQLEHVFNEVRELEKHPAKASPSVEEEQQVPAKVATAITGKTLE
HIGDAFVNVPDGFTPHPRVKPVMERRHKMSREGDIDWAFGELLAFGSLAMEGRLVRLSGQ
DSRRGTFTQRHSVFIDRKTGQEYSPLQNLADGQGRVMIYDSALSEYAAVGFEYGYSVANP
ESLVMWEAQFGDFVNGAQTVIDEYISSGEAKWGQRSDVVLLLPHGHEGQGPDHTSGRIER
FLSLCAEGSMTVAVPSTPANYFHLLRRHALDGIQRPLVVFTPKSMLRNKAATSPTEDFTG
ESRFMSVIDDVTPDPAKIRKVLLTSGKLYWELVAERTKREADDVAIVRIEQYYPLPKKKL
LAALERYTNATQVAWVQEEPENQGAWPFFGLNLPRKFPEVLSGLQVVSRRPMAAPSAGSS
KVHEVEQKALIAKAFD
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccagttcctcgcagacccttcttcagtcgatgccgcctggcacgacttcttc
gcggacttcaagccgacgcagagcgcgcaggccaaggcggacaccgcccggcagcagcag
gccggagccaagccggcggccaacggccaggcggcgcagccctcggccaaggccgtgcag
aacgcggagtcggcggccaagcagtcgtcgacggcgccggccgccaagccggcccccgcg
aaggcggccccgaagcaggcgccgaagccggccgcgaaggccgagcccaaggccgaagcg
aagaaggaagagccggagtcgaagcagctgcgcggcgccgcggcggccatcgccaagaac
atggacgcctcgctgagcgtccccaccgcgaccagcgtgcgcgcggtcccggcgaagctg
atggcggacaaccgcatcgtcatcaacaaccacctcaagcgcacccgcggcggcaagatc
tccttcacgcacctcatcggctacgccatggtgcgggcgctgaaggcgtacccgaacatg
aaccggcactaccagctgatcgacgggaagccgttcgcgatcacgccggagcacgtcaac
ttcgggctcgcgatcgacatgaagggcaaggacggctcccgcacgctcgtcgtggcctcg
atcaagggctgcgaggacatgtcgttcctgcagttctggcaggcctacgaggacatcgtc
aagaaggcccgcaacaacaagctcaccgccgacgacttctccggcaccacgatctcgctg
accaacccgggcggcatcggcaccaaccactcggtgccgcgcctgcaggccggccaaggc
gccatcatcggcgtcggcgccatgcagtacccggccgccttcgagggcaccagcgagaag
acgctggtcgacctcggcatcagcaagatcatgacgctgacctcgacctacgaccaccgc
atcatccagggcgcggagtcgggcgagttcctcaagcgcatccaccagctgctgctcggc
gaggacggcttctacgacgacgtcttcaccagcctgcgcctgccgtacgagccgatccgc
tgggtcgccgacatcccggacggcccggtcgacaagaccgcccgcgtgatcgagctgatc
gacgcgttccggatgcgcggccacctgatggccgacaccgacccgctgaactaccgccag
cgcagccacgcggacctggacgtgctgtcccacggtctcacgctctgggacctcgaccgc
gagttcccggtcggcggcttcgccggccaggagcggatgaagctgcgcgacatcctcggc
gtgctgcgcaactcgtactgccgcacggtcggcatcgagtacacccacatcctcgacccc
gaggagcgccgctggatccaggagcgcgtcgagatcccgcacgagaagccggaccccgcg
gtccagaagtacgtgctctcgaagctgaacgccgccgaggcgttcgagacgttcctgcag
accaagtacgtcggccagaagcggttctcgctcgagggcggcgagacggcgatcccgctg
ctcgataccatcctcgacaaggccgccgagcacgagctcgacgaggtcgtcatcggcatg
ccgcaccgcgggcggctgaacgtgctggcgaacatcgtcggcaagccgatcagccagatc
ttccaggagttcgagggcaacctcgacccgggccaggcgcacggctccggtgacgtgaag
taccacctcggcgccgagggcaagtacttccggatgttcggcgacggcgagaccaaggtg
tcgctgacggcgaacccgtcccacctggagacggtcgacccggtgctcgagggcatcgtc
cgcgccaagcaggacatcctggacaagggcggcgagggctacaccgtgctgccggtcctg
atgcacggcgacgcggccttcgcgggccagggcgtcgtcgccgagacgctgaacctgtcg
ctgctgcgcgggtaccgcaccggcggcaccgtgcacgtcatcgtcaacaaccaggtcggc
ttcacgaccgcgccggagcactcgcgctcgtcgcagtacgccaccgacgtcgcgaagatg
atcggctcgccgatcttccacgtgaacggcgacgaccccgaagccgcgcactgggtggcc
aagctcgccgtcgagtaccgccaggcgttccacaaggacgtcgtcatcgacctgatctgc
taccgccgccgcggccacaacgagggcgacgacccctcgatgacgcagccggcgatgtac
gacatcatcgacaccaagcgttcggtgcggaagacctacaccgagtcgctgatcggccgc
ggcgacatctccgtcgaggaggccgaggccgcgttgcgcgacttctcgagccagctggag
cacgtcttcaacgaggtgcgtgagctggaaaagcacccggcgaaggccagcccctccgtc
gaggaggagcagcaggtgccggccaaggtggcgacggcgatcaccggcaagacgctggag
cacatcggcgacgcgttcgtgaacgtgccggacggcttcaccccgcacccgcgcgtcaag
ccggtcatggagcgccgccacaagatgtcccgcgagggcgacatcgactgggcgttcggc
gagctgctggcgttcgggtcgctggcgatggaaggccggctggtccggctgtccggccag
gactcgcgccgcggcacgttcacccagcggcactcggtgttcatcgaccgcaagaccggc
caggagtactcgccgctgcagaacctggccgacggccagggccgcgtgatgatctacgac
tcggcgctgtcggagtacgcggccgtcggcttcgagtacggctactcggtggccaacccc
gagtcgctggtcatgtgggaagcgcagttcggcgacttcgtcaacggcgcccagacggtg
atcgacgagtacatctcctccggcgaggccaagtggggccagcgttcggacgtcgtgctg
ctgctgccgcacggccacgagggccagggcccggaccacacgtccggccgcatcgagcgc
ttcctctcgctgtgcgcggagggctcgatgacggtggcggtcccgtcaaccccggcgaac
tacttccacctgctgcgccgccacgccctcgacggcatccagcgcccgctggtcgtcttc
acgccgaagtcgatgctgcgcaacaaggccgcgacctcgccgaccgaggacttcaccggc
gaaagccggttcatgtccgtcatcgacgacgtcaccccggacccggcgaagatccgcaag
gtgctgctgacctccgggaagctgtactgggagctggtggcggagcggacgaagcgcgag
gccgacgacgtcgcgatcgtgcggatcgagcagtactacccgctgccgaagaagaagctg
ctggcggcgctggagcgctacacgaacgcgacgcaggtcgcgtgggtccaggaggagccg
gaaaaccagggtgcgtggccgttcttcggcctgaacctgccccggaagttcccggaggtg
ctctcgggcctgcaggtcgtgtcgcgccgcccgatggcggccccgtcggccggctcgtcg
aaggtgcacgaggtcgagcagaaggcgctgatcgcgaaggcgttcgactga
DBGET
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