Astyanax mexicanus (Mexican tetra): 103022019
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Entry
103022019 CDS
T05042
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103022019
09142 Cell motility
04810 Regulation of actin cytoskeleton
103022019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103022019
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103022019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
Ras
GTP_EFTU
NOG1
Motif
Other DBs
NCBI-GeneID:
103022019
NCBI-ProteinID:
XP_007261046
Ensembl:
ENSAMXG00000001865
UniProt:
A0A8B9JUM3
LinkDB
All DBs
Position
3:complement(12789651..12809411)
Genome browser
AA seq
1518 aa
AA seq
DB search
MMAKKQDSRAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFHLDHTSVLSTS
DFGGRVVNNDHFLFWGEVERSLEDGSECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
STKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLQVDGFLLCVDVSRGMNRSFDDQMKFV
TNLYNHLGKTKKPVVLVLTKCDEGVERYIKDSHTFAITKKNLQVVETSARSNVNVDLAFL
TLMQLIDKGRGKLKIIPYFEALKHQSQLIASAKDRYEWLVNHIVKNHNETWPNISRRMQP
SPEYKEYVFLEGTAKAKKLFQQHIHRLKQEHIERRRKGYLSTLPLALSSLVSELDEIEHL
SWSGVQKVLESKKDFDHWFVVLEDAPWEDTPHLDNMEDERIPFDVLDTTAAEIIFDAHLE
HLRNESKRAEMRHEFKMKLASSPFVTPGKPWEEARSFIMNEDFYQWLEEPEYLDIYNRHQ
KVIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEELRFKALQKLQAERD
ALVLKHIHFVYHPTKDTCPSCPYCVDNKIEQTLALCFPTRYPSFGKSHMNDSKADRINLV
ILGKDGLARELANEIRALCTNDDHYVLEGKLYELILRPIEGNVRLPVNSFHTATFTPHGC
LCLYNSKESLSYVVESIEKLRESTLSRRENHIAQLPLSLLLVTKRGVGALSDIGGETAQS
LISQGQQVAMKLQCNFLEPASPGSGYGRNVNERQINQVLKCLLDSRRNAVFRSSSPPPPP
LPPGIRDMQQDQSPEADLRIVMCLMCGDSYDVDQLLAPFLLPQHCRPTSPHSSGTSVLLE
QTVGGHRQTIELSLLSYHASFTMRKSRLVHGYVAVYSARRKASFETLCAFLCEVPDIIPV
QLLAVGETQAELTDSDFAREMLTQGEDLARELEGRFASVVCGPGGVVGGLHRIDLLQPFF
MEVLEKKTLVEATHMYDNVAEACSMNENVYSPQCGSPSPVTMLLDSEEDMEASPPYHDGT
LTSHSGFRLPDLDSGDTFSVISELSTFENKLNNKVPLQVRPRPSVTFDLRKHNFNPYTDP
ISHRRSLTSNVTWPPAGESIYDPSDYAEPMDAVSKPRPSHEESIYSVPHDSTQGKIITIR
NSNRMHSNGGGNGSDSEGDGSSLERRRKFSTVGVKPRLYRDRSKRLGKFSNFRTSFSIGS
DDELGVLPKTKEDEVTVLKGESLIEEGEDPKKRNILRSLRRPGKKTRPKPRHSISKPLES
TYFGVPLVNVVSPDRPIPLFIDKCIRFIEATGLTTEGIYRVSGNKAEMESMQKQFEQDHG
LDLVEKDFSINTVAGALKSFFSELPEPLVPYSAQVELVEAFKINDREQRLQTMKDVLRRF
PRENYEVFKHVTSHLNKVSQWNRVNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTI
IETFIHQCAFFFYNQAPAESPTGLYGMPGPMVPTALPPSPTAMPSCIPPPPHFSPLLQSP
PNSPPQSPHTVPPEPQTL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaaaaagcaagattcgcgggcgcccacctacaacctggttgttgttggactg
tcgggcacagagaaagaaaaaggccagtgtggagttgggaagtcttgcctttgtaatcgc
tttgtccgcccaagtgcagacgactttcatctcgatcacacatcagtattaagtaccagc
gattttgggggccgggttgtcaacaatgaccatttcctgttctggggagaggtggagaga
tctttggaagatggctcagaatgcaggatgcatgtcgttgagcagaccgagttcattgat
gaccagacgtttcagccgcatcgtagcacagcactacagccttacatcaaaagagctgcg
tccacaaagctggcatctgctgaaaagctcatgtatttctgtacagatcagttggggctg
gagcaggactttgagcagaagcagatgcctgagggaaagctacaggtggacggctttctc
ctctgtgttgacgtgagtcgaggaatgaaccgcagctttgatgaccaaatgaaatttgtc
accaacctgtataatcacctaggaaagacaaaaaagcctgtcgtgcttgttctcaccaag
tgcgatgaaggtgttgagcggtacatcaaggactctcatacctttgctattactaagaag
aacttgcaagttgtggagacctcagctcggtctaatgtcaacgtggacttagctttcctc
acgctcatgcaactcatcgataaggggaggggcaagcttaagataataccttattttgag
gctctaaagcatcagagtcaattgattgcctctgcgaaggaccgctatgaatggctggtg
aaccacatagtgaagaatcataatgagacatggcccaacatcagccgacgcatgcagcca
tcgccagagtacaaagagtacgtctttttagagggtacggccaaggcgaaaaagcttttc
cagcagcatattcatcgacttaaacaggagcacattgagaggcgtcgcaagggatactta
agtactcttccactggcgttgagttctttagtatctgaactggatgaaattgagcatttg
agctggtctggggtgcagaaggttcttgagtccaaaaaggactttgaccattggtttgtt
gtgctagaggatgcaccgtgggaggatacaccacatcttgacaatatggaagatgaacgc
ataccctttgatgtgcttgacacaactgcagcagaaatcatctttgatgcacatcttgaa
catctgcgtaatgagagcaagcgagctgaaatgcgacacgagttcaagatgaaactggca
tcttcaccctttgtcactcctggcaagccatgggaagaggcacgcagcttcataatgaat
gaagatttctaccagtggctggaggagccggaatacttggatatttacaacaggcatcag
aaagtgatcattgaccgagcgaaggaggattttcaggaattactcctggagtattctgag
cttttctatgaacttgaagtagatgccaagccaagtaaggaaaagatgggtgcaattcag
gaagtgcttggggaggagctgcgcttcaaagctttacagaagcttcaggcagagagagat
gctttagtactgaagcacatccactttgtctatcacccaacgaaggatacctgtcctagc
tgcccatactgtgtggacaacaagattgaacagactttagccttatgcttccccacacgc
tacccttcctttggaaagtctcacatgaatgacagcaaagcagataggattaatttggtg
atcttgggaaaagatggtttagcaagagagctagcaaatgagatccgggctttgtgtacc
aacgatgaccactatgtgcttgaaggaaagctgtacgagctgatactcagacccattgaa
ggcaacgtgaggcttcctgtgaactccttccatacagccacattcacacctcacggatgc
ctgtgtttgtacaattcaaaggaatctctgtcttatgttgtggaaagtattgagaagttg
agagagtctacacttagcaggagggaaaaccacatagcacaacttcctctgtctcttttg
ttagtgactaaaagaggtgtgggagcattgagtgacattggtggtgagactgcccaatcc
ttaatctctcagggtcagcaggtagccatgaaactacagtgtaactttttggaacctgcc
tctcctggctcgggctatgggcgtaacgtgaatgaaagacagataaaccaggtcttaaag
tgtcttctggactccaggaggaatgctgttttccgtagcagttctcctcccccaccacct
ctgcctccaggtatcagggacatgcagcaggaccagagtccagaggcagacttgcgtatt
gtcatgtgcctcatgtgtggagattcctatgatgtagaccaacttcttgcgcccttcttg
ctgcctcagcattgcaggccaacctctccccattccagcggtacttcagtgcttctggag
cagacagttggcggccatagacagacgatagagctgtccctattgtcatatcatgcttct
tttaccatgcgtaaaagccggctggtacatgggtatgtagccgtttactctgctcgtcgt
aaggcctcatttgaaaccttgtgtgccttcctctgtgaggttccagacatcattccagtc
cagctgttagctgtaggggaaacccaagcggagctcacagactctgactttgcgagagaa
atgctgacccagggtgaggatctggctcgtgaactcgagggtcgctttgccagtgtggtc
tgcggaccaggtggagttgtcggaggactgcacagaatagatctcttgcaaccgttcttt
atggaggtgttagagaagaagaccctcgttgaggccacacatatgtacgataatgttgca
gaagcatgtagcatgaatgagaatgtgtattcccctcagtgtggttcccccagccctgtc
actatgctgttagattctgaggaggacatggaagcctctccgccttaccacgatggcacc
ctcacctctcacagtggattccgactgcctgaccttgattcaggggacacgttctccgtc
atctctgaacttagtacttttgagaacaagctgaacaacaaggtccctctacaagtcaga
cccaggcccagtgttacctttgacctccgaaagcacaactttaatccctacacggaccca
atcagccaccggcgatcccttacctccaatgtgacctggcctccggctggagaaagcatt
tatgatccatcagattacgctgagccaatggatgctgtgtccaagcctcggcccagccat
gaagaaagcatttactctgtgccgcatgacagcacacagggaaagatcatcaccatccgg
aattccaacaggatgcattctaacggtggtggcaacggctcagacagcgaaggagatggc
agctcgttggagcgccgacgcaagttctccacagtaggggtgaagccacgactgtaccgg
gaccgctccaagaggctcggcaagttcagtaacttccgcaccagtttctctatcggtagt
gatgatgagcttggtgtccttccaaagacaaaggaggatgaagtgactgtgctaaaagga
gagtcacttatcgaggagggggaagatcccaagaaaagaaacattctgaggagccttcgt
cgaccaggcaaaaaaacgagaccaaagcctcgacactcaatctctaaacctttggagagt
acttattttggggtgcctttggttaatgttgtgtctcctgatagacccattccactattc
attgataaatgtatccgcttcattgaggccacaggtttgaccacagaaggtatttacaga
gttagtgggaacaaggcagagatggagagcatgcagaaacagtttgagcaagaccatggt
ctagacctggtagagaaggacttctcaataaacacagttgcaggagccctgaagagcttt
ttctcagagctgcctgagccattggttccatacagtgcacaagtggagcttgtggaggct
ttcaagataaatgatcgagagcagaggctacaaaccatgaaggatgtactgagaaggttt
ccccgcgagaactatgaagtcttcaaacacgtcacgagtcacttgaacaaggtcagccag
tggaaccgggttaacctgatgaccagtgaaaacttgtccatctgtttctggccaacactg
atgcgccccgatttcaccaccatggacgctctgacggccacgcgcacctaccagacaatc
attgagacctttatacaccagtgcgcattcttcttctacaaccaagcccccgctgagtcc
cctacgggactctatggcatgccgggaccaatggtgcccaccgctctgccgccgtcaccc
accgccatgccctcctgcattccgcctcccccacacttcagtcccctgctgcagtcaccg
cccaattctcctcctcagagcccccacactgtcccaccggagccacagacactgtga
DBGET
integrated database retrieval system
