Astyanax mexicanus (Mexican tetra): 103026062
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Entry
103026062 CDS
T05042
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF-like isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103026062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103026062
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
103026062
NuRF complex (fruit fly)
103026062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
DDT
WSD
PHD_5
WHIM1
Motif
Other DBs
NCBI-GeneID:
103026062
NCBI-ProteinID:
XP_022520754
LinkDB
All DBs
Position
Unknown
AA seq
3120 aa
AA seq
DB search
MRGRRGRPPKTVLMQEPSTGPVRGLRPRRGLKVKSKGAADEDYVTPTKRGNQQSPRARKK
GGSAGARGRGRGRGGAAAAGAGGRGRGRRSAASAVVYDDHESDEDEDAVSLASEEDEEVE
EEPITDEEEEEVVDNESDYLEELPEENEEDDASYCTESSHGSTPGRKRRRAHRPRSPILE
QKEIPALNLPASSEDLLIPAEQLLNASSIYEVLRNFSTVLRLSPFRFEDFCAALVGQEQC
TLMAETHIALLKAILREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVVRSYCESDPEF
RDVLPHLEGEEYPFGPLDSKVKVLQFLVDQFLTTNLAREELMSEGVVQYDDHCRVCHRLG
DLLCCETCSAVYHLECVKPPLEEVPEDEWQCEICVAHKVPGVSDCIMEVQKSRPYLRQEP
IGYDRHQRKYWFLNRRIVVEEDGEDEAGKKIWYYSSKVQLGELLELLDKEFWEIDLCVVL
EELREEIHSHMDITEELTNKARGNNKAYLTVVNDEILEKVKARQEAEEVKRRAAEKSKQG
GEADNTVSSAADCSSPQLDSGDGTMGSEKTEADAATIPAAEDSSTSVSGRPQDDPPKPDL
QSPPRGAATAAPSAAAAGEPGEGAEAEREWADKSSESGCREPVLESEPPQTADENSCSSH
FSISDCLRPPEEPDLADRSSQSSLNSQEDTGEGKGNGDGMRSGSSLRMVTRLRNPDSKLS
QRKIMQDKDGSTQDCSKALNQTTTLTPFGSGRTLVNKSSSNSGFFKLGQEGKFRVYHNQY
STNTLALNKHQHREDHDKRRHLSHKFCMTTAGEFKWNGSVHGSKTLTVSTLRLTIIQLEN
NVPAPFLHPNWASHRSNWIKAVQMCSKAREFALALAILECAIKPVVMLPMWKDSLGHTRL
LRMTSMEREEKEKVKKREKKLEDEETMQQATWVKYTFPIKHQVWKQKGEEYRVTGYGGWS
WVSKTHVYRFLPKLPGNTNVNYRKALEAAKTEHENQASPSPTKTKSSPSEKPKVSSSVQK
PANEDKHSNSVKESGKEKSPVEEKTLTEEKREEKEEEKMEVDGEAVHKSENLIKKESNES
SEPMDTSASNSTGSSDEKVNERSTSSPSLNEKTSKVEPTDGEMSKASDETSEATFDREVV
NVSEGFLQRTAYKKKVKASKLDGLLERRVKQFTLEERLRLEKLKQQAAISKPSAGDQEKE
KTTSSTKQEIQSSQATASDALKSVQTDELVEPVMKEKDPVVQKLEFDQEEEQPKPNNSLE
KTDNLDVRLDSGPKTETLAQVEQGQKGETEAEHKTGNGAPAPAAPELNGGSRQDVEKDLD
LKTETDCPKIEETGRKSPVENSSSIGENGLNVDKSLPVHVNGKDGSVDSSPTSLTNNINS
KDEMQTTEDETRLLAPKEPLKSLMNGDLSQEGQREKAKVDEPLETVMDKSDSEYLPPQKV
AKIAENNTEGIVDSTVDSTVDSTVGSTVDSTLPQLTPTESRLKPDVLSNSAKVPSIEAEE
AKSKSLSPSSVPSADESSLSSDFPENSNSSNSGIKTIITQVTTTTTTTVSTTESRTVPCT
AEASSTSSVLDGTAISNNSTSATSSSSSTSSSSSSSVPKVESTTSVSTLSTTTTTTVTKV
SNPVLGAKVTEESKTVVTATLMDAKSGPSGCSVTSMTVSKEYSTRDRVRLMKFSRSKKTR
SGTALPSYRKFVTKSSKKSIFVLPNDELKKLARRAGIREVPIFNYNAKPALDIWPYPSPR
PTFGITWRYRLQTVRSLAGVSMMLRLLWACLRWDDMAVKPSPAVGTTRTETSETDITTTE
IIKRRDVGPYGIRSEYCIRKIICPLGVPETPKETPTPQRKGLRSSALRPKKPEPSKQTGP
VVIESWVPEEELELWEIRAFTERVEREKAQAADPTKVSVQKKAEEVKAQLEAQLKQQRLA
AQQKRLDQQKPGGNTVNTTLTSTPTSTGSTTQKVVVGSLTSPVTPGTKVVLTTKLGTPVT
FQQNKNFQQTFASWVKQGQGNTASTTSITTVAASSISTSGQTFQIAAAPGSKGANVITAK
LPLPANSKIVTVNVPASQGGVVQVQQKVVGIIPSSTAGTAQSFTSFQPRTGNVSIRPNTT
TTTQQVTTAGTPLRPGMTVVRSPLQQTTTLGKTIIRTPLMVQGQGQQVVTQIIRGTPVSK
AVAGSPAQAGTGTPPRPATPGQPQTPQTPPAARPQQGQVKLTLAQLTQLTQGAQGGNPGL
TVVIQGQGQTTGQLQVIPQGVTVIPGPGQQLMQAAMPNGQVQRFLFTPMPPAPAPAVSTP
STSVIPATTTGTTTTPTMPIQPARQPAVQAQPPIQPSNLPSSPPSLPTPQPVQHPATPAQ
TPAPSFPVSSPQPHLSSPQPQIQPQPQLIQPQPQLQAQLQPQVQIQPQLQTQIQPQPQLQ
PQTQLLPQPQLQPQTQLLTQPQILPQPLQQIQPQPLLQPQTQTQLQPQTLPQSQPQPQLQ
TQTLLQSQPRLQPQPLLQPQPQLQPQPQLQIQPQLQIQPQLQIQPQLQIQPQLQIQPQLQ
IQPQLQPQPQSPLTTQTQIQQSPPTAVSHVAQVASPPAQVTSIAVAPQVTQTTVTQVQPQ
IQLPTQLLSVPGLQQQVLSHIQNQVAAQLQAQAQQGTLPQQIKLQLPIQIQQQGGGQVQT
HQIQNVVTIQTASVQEQLQRIQQLRDQQQQKKKQQQEAKREQQASSQSDLLQKQVVMKQN
AVIEHLKQKKTMTPAEREENQRMIVCNQVMKFILDKIDKDEKQAAKKRKREESVEQKRSK
QNASKLSALLFKHKEQLKAEILKKRALLDKELQVEVQEELRKDLTKLRREKEKAQAAASQ
AAAAAASAQAAAHASAAAATAPVTSAASSHKRKRDEDRDGTPSKSKKKKMISTSSKDNKR
DTKLYCVCKTPYDESKFYIGCDLCSNWYHGECVGITEKEAKKMDDYICAECKRGQEGSSE
ELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEATHIDEYVCPQCQSTEEAMTVLT
PLTDKDYEGLKRILRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLSTIEQKIQKRFY
SKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEFLETFFVQKLKAFKASRSHNNKLQSSAS
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagaagaggcaggccgcccaagaccgtactgatgcaggagccctccacaggg
ccggtgcgggggctcagaccccgccggggactgaaggtgaagagcaagggggcagctgac
gaggattatgtgactccaaccaagcgggggaaccagcagtcgccgcgggcccgcaagaaa
gggggctccgcgggagctagaggcagaggcagggggagaggaggagctgctgctgccggt
gctggtggacggggtcgggggagacggagcgccgccagcgccgtggtctacgacgaccac
gaaagcgacgaggatgaggacgccgtgagcctggcctcggaagaggacgaggaggtggaa
gaggagcccatcacggacgaggaggaggaagaagtcgtcgacaacgagtcggactatctg
gaggagctgccggaggagaatgaggaggatgatgcgagctactgcaccgagagcagccac
ggcagcaccccaggacggaaaaggcggagagcccaccgtcctcgctcccccatcctggag
cagaaggagatccctgctctaaacttgcccgcatcttctgaagacctgcttattcccgca
gagcagctgctcaatgcctcgtccatttacgaggtccttcgcaacttcagcacggtgctg
cgtctctctccattccgttttgaggacttctgcgcagccttggtgggtcaggagcagtgc
acgctgatggcagagactcacatcgccctgctgaaggccatcctgcgcgaggaggacacg
tccaacaccaccttcggcccggccgacctcaaagatagcgtcaactctacgctctacttt
atcgatggtatgacctggccggaggtggtgaggtcttactgcgagagcgaccccgagttt
cgggacgttctgccgcacctggagggagaggagtaccctttcggaccgctggacagcaag
gtgaaggtgctgcagtttctggtggatcagtttttgaccaccaaccttgcccgagaggag
ctgatgtctgagggcgtggtgcagtatgacgatcactgccgcgtgtgccaccggctcggc
gacctgctgtgttgcgagacctgctcggccgtgtaccacttggagtgtgtgaagcctcct
ctggaggaggtgcctgaggacgagtggcagtgtgagatttgtgtggcacacaaggtacct
ggagtctctgactgcattatggaggtccagaagagcaggccgtacctccgtcaggagccc
attggctacgatcggcatcagagaaagtactggttcctgaaccggaggatcgttgttgag
gaggatggcgaggacgaggcggggaagaagatctggtactacagctctaaggtgcagctg
ggggagctgctggagctgctggataaggagttctgggagatcgacctgtgtgtggtcctg
gaggagctgagggaggagatccacagtcacatggacatcacggaggagctcaccaacaag
gcccgtggcaacaacaaggcctacctcaccgtcgtcaacgatgagatcttggagaaggtg
aaggcccggcaggaagctgaagaggtgaagcggcgagcagctgagaagtctaagcaggga
ggcgaggcagataacaccgtctcatctgcagccgactgctcttctccacagctggactcg
ggagacgggacgatggggagtgagaagactgaggctgatgctgccactatccctgctgct
gaggacagtagcaccagcgtttctggacgccctcaagatgacccacctaaacccgacctc
cagagccctccaaggggcgctgccaccgctgccccctctgctgcagctgcaggggaacct
ggagagggggctgaggcggagagggagtgggcagataaaagctcagagtcgggttgtcga
gagcccgtcctcgagagtgaacctccccagactgcggatgagaacagctgcagcagccac
ttctccatctccgactgcctaaggccaccggaggagccggacctcgctgaccgctcctca
cagtcttcactcaacagccaggaggacacgggtgaggggaaaggaaatggagatggtatg
agatctgggtcgtctctgcgcatggtgacgcgtctgcgcaaccctgacagcaaactgagc
cagcgcaagatcatgcaggacaaggacggcagcacacaggactgcagcaaagcacttaat
cagaccactacgctgactccctttggctctggcagaaccctggttaataagagcagctcg
aacagtggtttcttcaaactgggtcaggagggcaaattccgagtctaccacaaccagtac
agcacaaacaccctggctcttaacaagcaccagcaccgcgaggaccacgacaagcgccgc
cacctctcccacaagttctgcatgaccaccgccggcgagttcaagtggaacggctcagtg
cacggctccaaaaccctgaccgtgtccacgctgagactgaccattatccagctggagaac
aacgtccccgctcccttcctgcatcccaactgggcctcacacaggtccaactggataaaa
gcagtccagatgtgcagcaaagcgcgagaattcgctctggcattggccatcctagagtgt
gcaatcaaaccagtggtcatgctcccaatgtggaaggattctttgggtcacacaaggctt
cttcgaatgacctccatggagcgagaggagaaggaaaaggtgaaaaagagagagaaaaaa
ctggaggatgaagagacgatgcagcaggccacatgggtgaagtacaccttccccattaag
caccaggtgtggaaacagaaaggggaggagtacagagtcacaggttatggtggatggagc
tgggtctcgaaaacgcatgtctatcgctttctccccaaactacctggaaacacaaacgtc
aactaccgaaaagcacttgaggcagctaaaactgaacacgaaaatcaagcatccccctcc
ccgacaaaaacgaaatccagcccttcagaaaagcccaaagtctccagttccgtccagaaa
cctgcaaatgaagacaagcactcaaattctgttaaagaatctgggaaggaaaagtcacct
gttgaggagaaaactctgactgaggagaaacgggaggaaaaagaggaggaaaagatggag
gtggatggagaggctgtgcacaagagtgaaaaccttattaaaaaggaatctaacgaatcc
tctgaaccgatggacactagtgcctccaactccactggttccagtgatgaaaaagttaac
gaaagaagcacttcgtcaccttcgctgaacgagaagacttctaaagtagaacctactgat
ggtgaaatgtccaaagctagcgatgaaacttctgaagcaactttcgatcgtgaggttgtg
aacgtcagcgagggcttcctgcagcgcacagcgtacaagaagaaagtcaaagcctcgaag
ctggacgggcttttggagcggcgagtcaaacagtttaccctggaggagaggctgaggctg
gagaagctcaagcagcaggcagctatctctaaaccatctgcaggggaccaggagaaagag
aagaccacctcgtccacgaagcaagaaattcagagttcccaagcaactgcctctgatgct
ctgaagtctgtccagacggatgagttagtagaaccagtaatgaaggaaaaagaccctgtg
gtccaaaagcttgaattcgaccaagaggaggagcaaccaaagcctaacaattccttagaa
aagactgataatcttgacgttagattggactctggtcctaagactgaaacgttggcacaa
gtggaacaaggacaaaaaggagaaacagaagcagagcacaaaacgggcaatggagcacca
gcaccggcggctcctgagcttaacggaggttcgcggcaagatgtggagaaagatcttgac
ttaaagactgaaactgattgtcccaaaatcgaggaaactggaaggaaaagcccagttgag
aatagttcttccattggtgagaacggtttgaatgtagataaatccttgccagtccatgta
aatggaaaagatggttctgtagactcttcacccacaagtttgaccaataatatcaactca
aaagatgagatgcaaaccacggaggatgagacgagactcttagcaccaaaggaacctttg
aaatcgctcatgaatggggatttaagtcaggagggccagagagaaaaggctaaggttgat
gaaccattggaaacggtgatggataagtcagactctgagtatctgccacctcagaaggta
gccaagatagctgagaacaacacagaaggcattgttgactcaaccgttgactctactgtt
gattctactgttggttctaccgttgactctactctgccccagcttaccccaacagaatct
agattaaagccggatgtgcttagtaacagtgccaaggtgccgtcaatagaggccgaggag
gccaagtcgaaatcgctcagcccatcgtccgttccgtctgcggacgagtccagccttagc
agtgactttcctgaaaacagcaatagtagtaatagtgggataaagaccataatcacgcag
gtcaccacaacaaccacaaccacagtatccaccacagagtcccgcactgtaccgtgtaca
gcagaagcatcaagcacatcatcagtactggatggtacagctatcagtaacaactccacc
tcagccacatcatcctcatcatcaacatcatcatcctcgtcatcatcagtaccaaaggtg
gagtccaccacatcagtctccactctctccactacaaccaccaccaccgtcaccaaagtc
agcaatcccgttctaggagccaaggtgaccgaagagtccaagactgttgtaacagcaacg
ctaatggatgctaaatcaggaccttcaggttgctctgtgacctctatgactgtaagtaag
gagtactccactcgagacagggtacgtctgatgaagttctcacgctccaagaagacccga
tcggggacggccctgccctcttaccgcaagttcgttaccaagagcagcaagaagagcatc
ttcgtccttcctaatgacgagctgaagaagcttgcgcggcgagccgggatccgcgaggtt
cccatttttaactacaacgccaaaccggctttggacatctggccgtatccgtccccgaga
cccacgtttggaatcacatggaggtaccgactccaaacagtgcggtctttggctggagtg
agtatgatgttacggttactctgggcttgtctcaggtgggacgacatggcagtgaagcct
tctcctgctgtgggaaccacgcgcacagaaacatctgagacagatatcaccaccacagag
atcatcaagaggagggatgtgggaccttacggcattcgatcggaatactgcatcagaaaa
atcatctgtcccctgggagtgcccgagactcccaaagagacccccacgccccaaaggaaa
ggcctgcgctccagcgccctgcggccgaagaagcctgagccttctaagcagacgggtcct
gtagtgattgagagctgggtgccggaagaagagctggagctctgggagatacgagccttt
actgaaagggtcgagagggaaaaggcacaggcagcagacccaactaaggttagtgtgcag
aagaaagctgaggaggtcaaggctcagttggaagcccagctaaagcagcagagattggca
gctcagcagaaacggttggatcagcaaaaacctggaggcaatacagtcaacaccaccctg
accagcacacccaccagcactgggtccaccacacagaaggtggtggtaggctctctgacc
agcccggtcactcctgggacaaaagtggtgctgaccaccaagttaggaactccggtgaca
ttccagcagaacaaaaacttccagcagacgtttgcttcttgggtcaaacaggggcaaggt
aatacagcctccacaacttccataaccacggtagccgcaagtagcatcagcacgtctggg
caaacgttccagatcgctgctgccccgggctccaagggcgccaatgtcatcaccgccaaa
ctgcctctgccggccaacagcaagatagtcacagtgaacgtgccagccagccaaggaggt
gtggtccaggtacagcagaaggtggtgggaatcattccatccagcacagcaggcacagct
cagtcctttacttcattccagccacgaacagggaacgtcagcatccggcccaacaccacc
accaccacacagcaggtcacaacagctggaactcctctgaggcctgggatgactgtggtt
cgttctcctctccagcagaccacaactttaggaaagaccattatccggacacccctaatg
gttcaaggtcagggtcagcaggtggtcactcagatcatccgtggaactcccgtatccaag
gctgtggccggcagcccggcacaggctggcacaggcactccccctcggcccgccacacct
ggccaaccgcagacccctcagacaccccccgccgctcggccgcagcagggccaggtcaaa
ctgaccctggctcagctcacacagctcacgcagggtgctcagggagggaatcccggtttg
acggtggtgatccagggtcagggccagaccacaggccagctccaggtcatcccacagggg
gtgactgtgataccaggtcctggtcagcagctcatgcaggcagccatgccgaacggccag
gtccagcgcttcctttttacccccatgcccccagcaccagctccagccgtatccacaccc
agcacctccgtcatcccagctaccactaccggcaccaccaccacacctacaatgcctatt
caaccagcgaggcaacctgcagtacaagctcagcctcccatccagccctccaaccttcca
tcatcgcctccctctcttcctacaccccaacctgtccaacatccagccaccccagcacaa
accccagctccttctttcccagtctcatctccacaaccccacctttcttcaccccagccc
caaatacagccacagcctcaattaatacagccacagccccaacttcaagcccagcttcag
ccccaagtccagatacaaccccagcttcagacgcagatccagcctcagccccaacttcaa
ccccagactcaacttctcccacaaccccaacttcaaccccagactcaacttctaacccaa
cctcagatcctgcctcaacccctacaacagatccagccacaacctctgctgcagcctcaa
acccaaactcagctccagcctcaaaccctgccccagtctcagccccaaccccagctccag
actcagaccttactacaatcccaacctcgccttcagcctcaacctttacttcagccccaa
cctcagcttcaaccccaaccacaactccagatccaaccacaactccagatccaaccacaa
ctccagatccaaccacaactccagatccaaccacaactccagatccaacctcaactccaa
attcaacctcaactccagcctcagcctcaatctcccctgacaactcaaacccaaatacag
cagtctcccccaacagctgtgtctcacgtagcccaggttgcctcccctccagcgcaggta
acctccatcgccgtggcccctcaggtgacccaaaccacagtaacgcaggtccagcctcag
atccagctccccacccagctcctcagcgtgccagggctccagcagcaggtcctctcccac
atccagaaccaggtagcggcccagcttcaggcccaggcgcagcagggcaccctcccccag
cagatcaagctgcagctgcccatccagattcagcagcagggtggaggacaagtgcagacg
catcagatccagaacgtggtgacaatacagacggccagcgtccaggagcagctccagcgc
atccagcagctgcgggaccagcagcagcagaagaagaagcagcagcaggaggctaagagg
gagcagcaggccagcagccagagcgacctgctgcagaaacaggtcgtgatgaagcagaac
gcagtcatagagcacctaaagcagaagaaaactatgaccccagccgagagggaggagaac
cagagaatgattgtgtgcaaccaggtgatgaaattcatcctggataagatcgacaaagat
gagaagcaggcagctaaaaagaggaagcgggaggagtctgtggagcagaagcgcagcaaa
cagaacgccagcaagctctcggctctgctcttcaaacacaaggagcagctgaaagctgag
atcctgaagaagagagcgctgctggataaggagctacaggtggaggtgcaggaggagctg
aggaaagatctaactaagttaagacgagagaaggagaaggctcaggctgctgcctcccaa
gcagctgccgcagctgccagtgcccaggcagccgcccacgcttctgccgcagccgccacc
gctccagtcacctccgcagcctccagtcacaaacgcaagcgggatgaagaccgcgacggc
accccctcgaagagcaagaagaagaagatgatctccacgtcctcaaaggacaacaagaga
gacaccaagctgtactgtgtatgcaaaacgccctacgacgagtccaagttttatatcggt
tgcgatctctgctcgaactggtaccacggtgaatgtgtgggcatcacggagaaggaggcg
aagaaaatggacgactacatctgcgcagagtgtaaaagaggacaggagggcagctcagag
gagctctactgtatctgcagaacaccttacgatgagtcccagttctacattggttgtgat
cgctgccagaactggtaccatgggcgctgcgtggggattctgcagagtgaggccactcac
atcgacgagtacgtgtgccctcagtgtcagtccacggaggaggccatgacggtcctgacg
ccactcacagacaaggattacgagggcttaaagcgaatactccgctccttacaggctcat
aagatggcatggccgttcctggaaccagtagatcctaacgacgctccagattactatgga
gtcataaaggaaccaatggacctttccacaatagagcagaagatacagaaacgattttac
agcaagctaacagagttcgtagcggacatgaccaaaatttttgacaactgccgctactac
aaccccagtgactcacctttttaccagtgcgccgagttcttggaaaccttctttgtacag
aagctgaaagcgttcaaagcaagcaggtctcataacaacaaactacagtcttcagcctca
tag
DBGET
integrated database retrieval system
