Astyanax mexicanus (Mexican tetra): 103027171
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Entry
103027171 CDS
T05042
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
103027171 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103027171 (srebf1)
04131 Membrane trafficking [BR:
amex04131
]
103027171 (srebf1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
103027171 (srebf1)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103027171 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
103027171 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
103027171
NCBI-ProteinID:
XP_022529045
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All DBs
Position
2:complement(9726681..9756091)
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AA seq
1164 aa
AA seq
DB search
MNNLSFDDPSLDNLDPSLSLNDPSDIDTALLSDIDDMLQLIHSQDMEFGGLFDHPPFPGP
LAPVQDLSALPPSSSPPSAPSSPPTTTTTTTSSILSSSPHLDALLGPPITRSSPAPFTPP
TFKQSPLAQVTPTPAAPRQQPTPLQTSQPKAQPAALHPSSQAAQAALTPSPAKSPVYSTT
QPAPQQQQPQPQQPQPQQQPPVVTFPNQNGYTVVPQQGSPQPVPSVPSSPQNIQPMTIQA
QVQNLSTSPILTATSSSPAQTISPHVQQVPVLLQPQFIKADSLLLTTLKPDASMVTTVAS
PCITSLATSTAPIQGTSLQALMSGGTILTTVPVMVDTEKLPINRIAISGKPGGQVHKGEK
RTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKAIDYIRYLQQSNQKLKQEN
MALKMANQKNKSLKDLVAMEVDVKNELPTPPASDAGSPLPSGPFSHCSSDSEPDSPMVDD
SKPMTQAERSAGGMLDRSRMALCAFTLLFLSFNPLASLMWGSSSSNSRAGDTVGPSHVGT
GRNMLGMESAAESWGWMDWMLPTLLVWLLNGVLVVGVLIKLLVYGEPVTRPHSESSVLFW
RHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLACAVLWSTLRLWLQRLWVGR
WLACKAGGLRADRPLKDDARKSCRDAALVYHRLHQLHMTGKLGGSHLFAVHMALSAVNLA
ECAGDCLSVATLAEIYVSAALRVKTSLPRLLHISSRGFLSRARQACLSPSGSVPPAMQWL
CHPLGHRFFVDGDWSVRSSPKESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVAQPHGD
KTPNLGQGEYSDALEYLQLLTSASDAAGATTQAFAIGSNMATVTGCDPHSKWWSSVAVVI
INWLQGDDVAAERLYPAVEHLPRSLQSAESPLPKACLNTFKAVRALLAKPENSQLSLSYC
EKASGLFRDSLNLGPHGRSSSTLDKLVQLLLCDLLLVTRTNVWRDQQVCSPATGQQSSAS
AASPAELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRR
ATPGGKSGEDLEECETRPGQREQAEAVMLACWYLPPSFLSAPGQRVGMLADAARTLEKLG
DKRTLHDCQQMIIKLGSGTTVTST
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgtcttttgacgatccgtcactggataacttggacccaagtttatcccta
aatgacccgagcgatatcgacaccgctctgctgagcgacattgacgatatgctccagctc
atccacagccaggacatggagttcggcggcctgttcgaccaccctccgttcccgggccct
ctggctccagtgcaggacctttcagccctgcctccatccagctcacctccctctgccccc
agctcaccccccactaccaccaccaccaccacctcctccatcctcagcagcagcccacat
ctggatgctctgctgggtcctcccatcacccgcagctccccagcccctttcaccccacct
actttcaagcagtcccccctggcccaggtgacccccacgcctgctgccccacgccagcag
cccaccccgctccagaccagccagcctaaagctcagcctgctgcccttcacccctccagc
caggctgcccaggctgcccttactccatcacctgccaagagcccagtctacagcaccacc
cagccggccccccagcaacagcagccacagccacagcagccacagccacagcagcagccg
cctgtcgttacattcccaaatcagaacggatacactgtggtccctcagcagggctccccc
cagcccgtccccagtgttcccagctctccacagaacatccaaccaatgaccatccaggct
caggtccagaacctttccacatcacccatcctcaccgccacatccagctccccagcacag
accatttccccccacgttcagcaggttcctgtcttgctccagcctcagttcatcaaggct
gactctctcttactcacgactctgaagcctgatgcatcaatggtgaccacagtggcgtct
ccatgcatcacttccctggctacgtccaccgctccgatccagggcacgtccctacaggct
ctgatgagtggaggtaccatcctgaccacggttccagtcatggtggacacagagaagctg
cccatcaaccgtatagccatcagtggcaagccaggtggtcaggttcacaagggcgagaag
cgtacggctcacaacgccatcgagaagcgctatcgctcctccatcaacgacaagattatc
gaactcaaggatctggtggctggaacagaagctaagctgaataagtcagcagttctgagg
aaagccatcgactacattcgttacctgcaacagtccaaccagaaactcaagcaggagaac
atggctctcaagatggccaatcagaagaacaagtctctgaaggacctggtggcgatggag
gtggacgtgaagaacgagctgcccactcccccagcctccgatgctggctcccccctgccc
agcggccccttctctcactgcagcagcgactcagaaccagacagtcccatggtagacgac
agtaagccgatgactcaagctgaaaggtctgctggaggaatgctggaccgttctcgcatg
gctttgtgtgccttcaccctcctcttcctctcatttaacccactggcttcactgatgtgg
gggagcagtagcagcaacagcagagctggagatactgtcggccccagccatgttggaact
ggcaggaacatgctgggaatggagagtgcagctgagtcatggggctggatggactggatg
ctgcccactctgttggtgtggttgctgaatggcgttctggtagttggagttctgatcaag
ctgttggtttatggagaacctgtcactagacctcactctgaatcctccgtcctcttctgg
agacaccgcaaacaggccgacctggatctggcacggggagactttgcccaggcctctcag
aacttgtggacctgcctgaaagctctcggccgacccctgcccacctctcagctggacctt
gcgtgcgctgtgctgtggtccaccctacgtctttggctacagaggctgtgggtgggtcgc
tggctggcctgtaaggctggaggccttcgcgctgatcgccccctgaaggatgatgcgcgc
aagagctgccgtgacgccgccctggtctaccaccgcctgcaccagctccacatgacaggt
aagctgggtggcagtcacctctttgctgtccacatggccctcagtgcggtgaacctggcc
gagtgtgctggcgactgtctgtctgtggccacgctggcggagatctacgtctcggctgct
ctgcgggtgaagaccagtctgcctcgtctgctgcacatcagctctcgtggctttctgagt
cgagctcgccaggcctgtctctcccccagtggcagtgttcctcctgccatgcagtggctg
tgtcaccctctgggtcatcgcttctttgtggatggtgattggtctgtgcgcagcagccct
aaggagagcatctacagccaggccgggaacacagtggaccctctggctcaggtgacacag
gccttcagggagcacctgctggagaaggccctgtactgtgtggcacagccccatggagac
aagacacctaacctgggtcaaggagaatactccgatgccctagagtacctgcagctgctg
accagtgcctcggatgcagcgggagccaccacccaggctttcgccatcggctccaacatg
gctactgttactggctgtgaccctcactcgaaatggtggtcttcggttgcggtggtgatc
attaactggctgcagggggatgacgtggcggcggaaagattgtatccggcagtggagcac
cttccacgcagccttcagtccgcagagagccccttacccaaagcttgcctgaatacattt
aaagcagtgcgcgccctgctggccaaaccggagaacagccagctcagcctcagctactgt
gagaaagccagcggcctgtttagagacagcctcaacctggggccacacggcaggagcagc
agcactttagataagttggtacagttgttgctgtgtgatctgctgctggtaacgcgcact
aatgtgtggcgggatcagcaggtgtgttctccagccaccggtcagcagagctctgcgtcg
gcggcctctccggcagagctgcagggcttccagcaggacctcagctctctgcgtaaactc
gcccacagcttcagacccgccatgcgcaggttgtttctgcatgaagctacagccaggctg
atggcgggtgccagccccacgcgcacacaccagcttttggaccgcagtctacgccgtcgc
gccacacccggaggcaagagcggtgaggacttagaagagtgtgagacgcggccgggtcag
cgagagcaggctgaagcggtcatgctggcctgctggtacctccccccttcctttctttcg
gcacccggccaaagagtgggcatgttggcggatgcggctcgtacgctggagaagctgggg
gacaagcgcactctccacgactgccaacagatgatcatcaaactgggcagcggaaccacg
gtcacctccacataa
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integrated database retrieval system
