Astyanax mexicanus (Mexican tetra): 103028080
Help
Entry
103028080 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103028080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103028080
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103028080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
103028080
NCBI-ProteinID:
XP_022521150
LinkDB
All DBs
Position
Unknown
AA seq
1754 aa
AA seq
DB search
MVDASAACRMNPLTALGIDRSSLMRESLHVHGGMVYPPGIRTLPTEKGYVGDRIPELLYK
PDVSLDGRKATNGYVGLYKSPPPGIQKPLVVPGTGADTLGLDRRVAPVDKPSELGLNGGS
ASGYLRLPWVSPYHEPGLYPFLDSSKYAALNMYKASFMSQPSPYLTQHLAYQPLCAGAGG
SAAGAERLFYMPPYPPAPISSPLAPPLRIPTATVAPTPLSPLVHHQDKTLQSIGPRIHHE
PSAFGQQSLHQQTQSHHQAQSERQHTNTGSISSLNSSSKSTRTPSSKNLSSSSSSVNNIS
TSSSIISCNSSSSSISSSSCASITSSPSTSIPVDSSPSLVMQAPRPAPRSSQPPGAPPPL
VDSTLDFQKSVFRSPSSSMSSSTPSHPFYMSQESRSPIRPASQKSKSKDGSSDQHRSGGS
ERKGCNSPIKTSTEKPVQQGAPTKDPADKPLDLSGKIMDFEGPPDGCPPKLEALAKLGYS
PNSRYGHPPSRELLKETLSPSSSAVSTSSKTPERPEIISTLHSTWVVPSTTQTHSSESNQ
SKSSSVIKNKNLEHVTQQPRSSSCPRIGEPNNSAVPNPAPVPANSACRPSSASPSPKVNG
DWPKSAPTPPEKVPATHPHRGGSLTSASKPPKIPKKSDTPEIGFKSHQPHIENGHPPSHL
YLPQSDSYLPTSLAYANRYLPYSVPESISLSHLQLPSKGPVYPHPVLLSSSSLYAARLPH
KPGLPYGIPTTHGEYLTYHDSQEMVHPLMSSHMPLDPKVNERLELRSRPQEKAWQHEEGP
YKQQSASDIDARYKSERESEGPELLASRPQSKLHTASKDEIVCIDLVQDDTDGSPEPDKY
CASPAKQREPTKPASSGIGEGTGSAGNSKGKEPELMHILRSSQPVESRPAEADRLPEPCS
PAEAQERPESPGQSQGEESSSERSPLSPLLEEQTLRCARTSGDRVRPDVANFKPDRHHAI
RQYMDLGKESTENTDSHEEEEDGHGCSKSRRSSLAKRIANSSGYVGDRFKCVTTELYADS
SKLSREQRALQMEVVSPEDSNLSQPAANCERAMMRFSELELKEKEGCVSSPSPVRERGLA
EGQRGEPEWDQGQHCSITPAAPAEQTEPHSGGNRVPVLQRCVPPEDKRTRDERERKEQVG
EGGIVGTATGRKRLLSLEPSQGHPDCTHSAEERERDGERERTRERDVAEDENTIPAKRSR
LIPADVWRQPSEQEVKNLKVCIELTGLRLSKPRQLQNLQELWDRQGALSREKTCPTQPNP
CTPHSVPCGERKSRTGGADEKGWGRKDLGYTDIETAPVLSGLCSPDCKPLPPSRLSDKRQ
RLKEHRRGGLSPDLDDELAPRLLRHGDLEKPKGKRQCKTKHIGHRELRMLAANEESPELS
PAHPLKVAKHFPSDCLGPPPVIQRTPSPSSPAAPPSPPLQPAAAAAPVAVVTPAPALVPS
EPPASRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAGYCAL
HEACARGWFTIVQHLLQHGADINCSAQDGTRPLHDAVENDHLDIVRLLLSYGADPTLATY
SGRGLLKMTHSDIMEGFLSDYFADLQGRADDDPGVYWEFYGSAVCEPGDDPAAFDILADP
PGPEDEEDDHREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLKRLKMSARTFRST
FSHIEVVTIAEAEFYKQVSLSQLFSCPEELDGFCPDSKELLDLVEISAELVALLGSSLEY
LDDRWEPSVFKPRL
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaagtgcagcctgcagaatgaaccctctcacagcacttggcatcgatcgg
agcagcctgatgcgggaaagcctccatgttcacgggggaatggtttatccgccaggaatc
cgaactctgccaacagaaaagggctacgttggagaccggatcccagaactgctctataaa
cctgatgtgtcactggacggcaggaaagcaacaaacggctatgttggactttataaaagc
cccccaccggggattcagaagcccttggtggtgccgggtactggggcagacactttgggc
ttggataggcgtgttgcacctgtggataagccctcagagttgggtttaaacgggggtagc
gcaagcggctacctgcgtctcccatgggtcagcccataccatgagccaggattatatcca
tttctagactccagcaaatatgctgctctgaatatgtacaaagcatcatttatgtcacag
ccttcaccatacctgacccaacatctggcctaccagccactttgtgctggggcaggaggg
agtgcagctggtgcagaacgcttgttttacatgcctccttaccccccagcccccatttca
tcacctcttgcacctcctttaaggattcctacagctacagtagcccctacaccactgtca
cctctcgtgcatcatcaggacaaaaccttgcaaagcattgggccaaggattcaccatgaa
ccttctgcgtttgggcagcagtccttgcatcagcagacccagtcacaccatcaggcacaa
agcgagaggcaacacactaacactggaagtattagcagccttaatagcagcagcaagtcc
acccgaactccttccagcaagaacttgagcagcagcagtagtagtgttaataatattagc
actagtagtagtattattagctgtaacagcagcagctccagtatcagtagtagcagttgt
gcaagcataactagcagccccagtacaagcatccctgtagactcaagtccttctcttgtg
atgcaagcacctcgtcctgctccacggtcctcccaaccgcctggtgctcccccaccactt
gtggacagcactttagactttcaaaagtctgtatttcgaagtccttcgtcatcaatgtcc
tcatccactccatcccaccctttttacatgtcccaggagagccgctcccccataaggcct
gccagtcagaagtctaagtctaaagatggaagctctgatcagcacaggagtgggggaagc
gagaggaaaggttgtaattctcctattaaaacctccactgagaaacctgtacagcagggt
gctcctaccaaagacccagcagacaagcctttggatctgtctggcaagatcatggacttt
gaaggacctcctgatggatgtcctccaaaattggaggctttggcaaagctgggctactcg
cctaactctcgttatggacatcccccgagcagagagcttctgaaagagactctctctcca
tcatcttctgctgtcagcacttcttctaaaactccagagaggcctgagattattagcact
ttacactctacctgggtggtgccaagcacgacccagacacacagctctgaatccaaccag
agcaaaagttcttcagtcataaaaaacaaaaatctagagcatgttactcagcagcctagg
agctcttcttgtccacggattggtgaacccaacaatagcgctgtgcctaaccctgctccc
gttcctgcaaattcagcttgtcgaccatcgtctgcctctccttctcccaaagttaatggt
gattggccaaagtctgcccccaccccaccagagaaggtgccagctactcatcctcatcgg
ggagggagccttacctcggcttcaaagcctccaaagattcctaaaaagtcagacacccct
gaaattggcttcaaatcccatcagcctcacatagaaaatggtcatcctcccagtcatctc
tacctgccccagagtgattcttacttgcccactagcttagcttatgccaacagatacctt
ccatattctgttccagagagtatatccctctcacacttacagttgcccagcaaagggcca
gtataccctcacccagtcctgctgagcagcagcagtctgtatgctgcacgtttgcctcat
aaacctggccttccttatggaataccaaccactcatggagagtatctgacctaccatgat
tcacaagagatggttcatcccctgatgtcttcccacatgcctcttgaccccaaagtcaat
gagcgccttgaactgaggtctagaccccaggaaaaggcttggcaacatgaggaaggtcct
tacaagcagcagagtgcctctgacattgatgcacgctacaaatctgagagggagtcagaa
gggccagaacttctggcctccaggcctcagagcaagctgcacacagcaagcaaagatgag
atcgtctgcatcgacctggtccaagatgacacagatggcagtcctgagccggacaagtac
tgcgccagccctgccaagcaaagagagcccaccaagccagccagcagtgggataggggag
ggaactgggagtgctggtaattccaaagggaaggagccagaactcatgcatatcctgcgc
tccagccagccagtggaatccaggccagctgaggctgatcggctgccagaaccttgtagc
cctgctgaggcgcaggagcgccccgagtctcctgggcaaagccagggcgaggaaagttcc
agtgagcgcagtcctctgtctccactgctggaggagcaaacactgcgctgtgccaggacc
tccggtgacagggttcgtccagacgtcgcaaatttcaaaccagatcggcaccatgccatt
cggcagtacatggatttgggcaaggagagtacagaaaacacagactctcacgaggaagag
gaagacgggcatggttgctctaaaagcaggcgttctagcttggccaaaaggatagccaac
tcgtctggctatgtgggcgaccgcttcaagtgcgttaccacagagctgtacgcagactcc
agcaaactgagtcgggaacagcgcgccctacagatggaagtcgtatcaccagaggacagt
aatttaagtcaaccagccgctaactgcgagcgtgcaatgatgcgtttctcagagctggag
ctgaaggagaaggaggggtgcgtgtcgagccccagcccggtgagagagaggggtctggcg
gagggccagcgcggagaaccagagtgggatcagggccaacactgctctataactccagca
gcgccggcggagcagacggagccacacagcggtgggaaccgcgtccccgtcctgcagcgc
tgcgtcccgccggaggacaagagaacgagggatgagagggagaggaaggagcaggtgggg
gaggggggcattgtcggcacggcaaccggccggaaacgcctgctcagtctggaaccgagc
caaggccaccctgactgcacacactcagccgaggagagagagagagacggagagagggag
agaacgagggagagagatgtagcggaggatgagaacaccataccggctaaaagatcccga
ctcattccagcggacgtctggcgccagccctcagagcaagaggtgaagaacctgaaggtg
tgtatcgagctcactggcctgcggcttagcaaaccccggcagctccagaacctgcaggag
ctgtgggaccgccagggggcgctgtcccgggaaaaaacctgccccacccagccgaacccc
tgcactccacacagcgttccctgcggagagaggaagagcaggacaggtggagcagatgag
aagggatggggacggaaggatctgggatatactgacatcgaaacagctccggttctctcc
gggctctgttctccggactgtaagcccctccccccctcccgcctctcggataagcggcag
cggctgaaggaacaccggcgcggcggcctctcgcccgacctcgatgacgagctcgcgccc
cgcctgctgcgccacggcgacctcgagaagcccaagggcaagcggcagtgcaagaccaag
cacatcggccaccgcgagcttaggatgctcgcggccaatgaggaaagccctgagcttagc
cccgcccacccgctcaaggttgcgaagcactttccgtcggactgcctcggcccccctccg
gtcatccagcgcaccccctcgccctcatctcccgccgcccctccctcgccccccctccag
cctgctgcggcagcggcgccggttgctgtggtcaccccagcgcccgccctggtgccctcg
gagccgcctgccagccgccccatgccccctgaagcccgccggctcatagtcaacaaaaac
gccggcgagaccctgctgcagcgcgccgcgcgcctcggctacgaggaggtggtgttgtac
tgtttggagaataaggtgtgtgatgtgaatcatcgtgataacgcaggttattgtgcgttg
cacgaggcgtgtgctcgaggctggttcaccatcgtccagcacctgctgcagcatggagca
gacatcaactgcagcgcacaggacggcaccaggcctctgcatgacgcggtggagaacgat
cacctggacatcgtacggctcttgctgtcgtacggcgccgaccccacgctggccacctac
tccggacgaggcctgctgaagatgacccacagtgacatcatggaggggtttctgtctgat
tattttgcagacctgcagggtcgagcggacgatgaccccggtgtgtattgggagttctat
ggcagtgcagtgtgtgaacctggggatgaccctgcagcgtttgatatcctggccgacccg
cccggtcccgaggacgaggaggacgaccacagagaggtgtttgagtttgagttctctgac
cggccgctgctgccctgctacaacatccaggtctctctgtctcaggggcccaggaactgg
ctgctgctctctgacgttctgaagcgtttgaagatgtcggcgaggactttccgctccacg
ttctcccacattgaggtggtgaccatcgcagaggccgagttctacaagcaggtgtcgctc
agccagctgttctcctgcccggaggagctggacgggttctgccccgacagtaaggagcta
ctggaccttgttgagatcagcgcggagctagtcgccctactcggatcatcactcgagtac
ctggacgaccggtgggagccgtctgtctttaagccacggttgtga
DBGET
integrated database retrieval system
