Astyanax mexicanus (Mexican tetra): 103028869
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Entry
103028869 CDS
T05042
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103028869 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103028869 (emg1)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
103028869 (emg1)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
90S particles
Other 90S particles
103028869 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
103028869
NCBI-ProteinID:
XP_007249863
Ensembl:
ENSAMXG00000018994
UniProt:
A0A8B9KM33
W5LI96
LinkDB
All DBs
Position
10:9915090..9918087
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AA seq
238 aa
AA seq
DB search
MAAQAGEKRGLEHLDQYEPRAAKQKRSIHDKMAEKRLVVVLEGASLETVKVGKTFELLNC
DQHKNMIIKSGRDPGHVRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFPRFCGLMVQLLHKLSVRAADGPQRLLRLIKNPVSDHLPPGCPRFGTSFKAGEAVCP
RSIVPKDGPAAVVIGAFAHGAVNVDYTEQSVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcaggcaggagagaagcgtggtctggagcatttagaccaatatgaaccgcga
gcagctaaacagaagcgcagcatccacgataagatggcagagaagcgcctggtggtggtt
ttagaaggagcttctctggaaactgtgaaggttggtaagacatttgagctgctgaactgt
gaccagcacaagaatatgataataaagagtggacgggaccctggtcatgttcgcccagat
atcacacatcagtgcctactgatgttgatggacagtccgttaaacagagcaggactgctg
caggtgtacattcacacagagaagaacgctctgattgagatcaatcctcagactagaatt
cctcgcaccttccctcgtttctgtggccttatggttcaacttcttcataagctaagtgtt
agagcagctgatggtccacagcgcttgctgaggttgatcaaaaacccagtttcagaccac
ctgccaccagggtgcccacggtttggcacttctttcaaagctggagaagcagtctgcccc
cgatccattgttcctaaggatggtcctgctgctgttgttataggggcatttgcacatgga
gcagtgaatgtggactacacagagcagagcgtgtccatcagtaactaccctctgtctgct
gctctcacatgcgccaaaatgtgctctgcctttgaagaggtctggggagtgttgtga
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