Astyanax mexicanus (Mexican tetra): 103029534
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Entry
103029534 CDS
T05042
Symbol
hdac4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
103029534 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103029534 (hdac4)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103029534 (hdac4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103029534 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
103029534
NCBI-ProteinID:
XP_022535909
LinkDB
All DBs
Position
19:9423063..9661794
Genome browser
AA seq
1050 aa
AA seq
DB search
MTSHSHQDGLPSKEQPLELLKPSGLNHIPSVDVSAALPIPVPPAAIPMDLRVDHQQQKHL
SLASVEPAPREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHVKHQQE
LLALKHQQELLEHQRKLERHRREQELEKQQREQKLHQLKNKERGQESAVASTEVKMRLQE
FVLNKKKALVQRSLNHCMPSDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLGLYDSKDD
FPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRREGPITTAKKRSLDMAESACNSAPGSG
PSSPNNSSNNITNENGIAGSISNSPVEPSLAHRLAGREGPVSHLSLYTSPSLPNITLGLP
APSSSSVASGQQEGERLAMANLQPGLSLTTPFIPGAHLPTYLAASALEREGGSAHNPLLQ
HMVSQNPLVSGLGTLPLQPPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQFLE
KHKQQFQQQQLHMSKMMAKPSEPGRQHESHPEETEEELREHQALTDPAEGLPRGVTIKQE
PPDELEEELQQRERQAEQELLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRPLS
RAQSSPASATFPIVVQEPPTKPRFTTGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSR
LQETGLRGKCECIRGRKATLEELQTVHSEAHVMLYGTNPLRQKLDSSVTPMFVRLPCGGI
GVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCY
FNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNILYLSLHRYDDGNFFPGS
GAPDEVGSGPGLGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFD
AVEGHASPLGGYRLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLG
NELEPLSDEVLQQRPNLNAVRSIEKVLESHSKYWRCLQRGASTLGYSLVEAQKCETEEAE
TVTAMASLSVAAKHMGKRSEEEPMEEEPPL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccacagtcaccaagatggccttcctagcaaagagcagccactggagcttctg
aagccatctggactcaaccacattccctctgttgatgtgagtgcagctctgcccattccc
gtgcccccggctgccatcccgatggatctgcgcgtggaccaccagcagcagaagcacttg
tcgctggcgtcagtggaaccagctccgcgtgagcagcagctgcagcaggagctcctggcc
ctcaagcagaagcagcagatccagcggcagctgctcatcgccgagttccagagacagcac
gagcagctctctcgccagcatgaggcccaactacaggagcatgtcaagcatcagcaggag
ctgctggctctgaagcatcagcaggagcttctggagcaccagaggaagttggagcggcac
cggcgcgagcaggagctggagaaacagcagcgcgagcagaagctacatcagctcaagaac
aaggagcgcggccaagagagtgcggtggccagtacggaggtgaagatgcgtctgcaggag
ttcgtgctgaataagaagaaagctctggtccagaggagcctcaaccactgcatgcccagt
gaccctcgctactggtatgggaaaacccagcacagttcactggaccagagttctccacct
cagacagggatttccacttataaccacccggtgctgggcctctacgactctaaagacgac
ttcccgctccgcaagacagcgtctgagccaaacctgaagctacgctccagactgaagcag
aaggtgacggagcggcggagcagcccactactgcggaggagggaggggccgatcaccacg
gctaagaaacgctcactggacatggcagaatcggcgtgtaacagtgctcctgggtccgga
ccgagctcacccaacaacagctccaacaatatcactaacgagaacggcattgctgggtcc
atctccaacagtccggtagagccgtctctggcacaccggctagctggcagggagggtcct
gtaagccatttgtccctgtacacatcaccctccctcccaaacatcaccctgggtctgcca
gcccccagctcatcaagcgtggcatctggtcagcaggaaggtgaacggctggcgatggcg
aacctgcagcctggattatccttaaccactcccttcatccccggagcccacctgcctaca
tacctggctgcctccgctctagagcgggagggaggctccgcccacaacccgctgctgcag
cacatggtctcccagaaccctctggtgtcaggcctgggtactctgcccctgcagcctccc
tccatccataaactgcggcagcaccggccactgggccgaacgcagtccgcgccgctcccc
cagaacgcccaggctctgcagcagctcgtggtccagcagcagcaccagcagttcctggag
aaacacaaacagcagttccagcagcagcaacttcatatgagcaagatgatggctaagccc
agtgagccgggccggcagcacgaatctcatcctgaggagacggaagaggagctcagagag
caccaggccctgaccgacccggccgagggcctaccccgaggggttaccatcaaacaggag
ccccctgacgaactggaggaggagctccagcagagagagagacaggctgagcaagagctg
ctcttcagacagcaggctctcctgctggagcagcagaggatccatcagctgaggaactat
caggcgtcaatggaggccgccggcctgtccgtcacgttccccggacaccgcccactgtcc
agagcacagtcgtccccggcctcagccaccttccctatcgtggtgcaggagccaccaacc
aaaccacgcttcaccaccgggctggtgtatgacactttaatgcagaagcatcagtgtatg
tgcggtaacaccaacacccacccggagcatgcaggccgcatccagagcatctggtccaga
ctgcaggagaccggactgcgcggcaagtgtgagtgtattcggggcaggaaagccacactg
gaggaactgcagacggtccactctgaagctcatgtaatgctgtatggaactaacccacta
agacagaaactagacagttctgtgacacccatgttcgtgaggttgccctgtggggggatt
ggggtggatagtgacactatctggaatgaggtccactcgtctagcgcagcccgcctggct
gtcggctctgtggtggagctggtatttaaagtggcatccggagagctaaagaatggcttt
gctgtggttcggcctccaggacaccacgctgaggagagcaccccaatgggattctgctat
ttcaactctgtggccatcgcagccaagcttctgcagcagcggctgaacgtcagcaagatc
ctgatagtggactgggatgttcatcatggcaacgggacccaacaggctttctacagcgac
cccaacatcttatacctttctctccatcgctacgatgacgggaacttcttccctggcagt
ggagctcccgatgaggtgggctcgggacctggccttggcttcaacgtgaacatggccttc
accggtggcctggaacctcccatgggcgacgcagagtatctggctgccttcagaacggtg
gtgatgcccatcgctaatgagtttgctcccgacgtggtgctggtttcgtcggggttcgac
gcagtggagggccacgcttcgccacttggaggatacagactcacggccaagtgttttggc
tacctgaccaagcagctgatgggcctggccggcggccgcctggtgctcgccctggagggg
ggtcatgacctcactgccatttgcgatgcgtctgaagcatgtgtttctgctttactagga
aacgagctggagccactttctgatgaggttctgcagcaaaggcccaatctcaatgctgtg
cgctccatagagaaagttctggaatcacatagtaagtactggcgctgtctgcagcgcggt
gcttcgacgctgggctactctcttgttgaagctcagaagtgtgagacagaggaggccgag
actgtgaccgccatggcctctctgtctgtagctgccaaacacatggggaagaggtccgag
gaggagccgatggaggaagagccgccactgtag
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