Astyanax mexicanus (Mexican tetra): 103029566
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Entry
103029566 CDS
T05042
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103029566 (katnb1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103029566 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
RMC1_N
WDR54
PROPPIN
PD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
103029566
NCBI-ProteinID:
XP_022542216
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MAASDVTKMWWKLQDMVAHSSKVSSLVLGKSGRLLATGGEDCRVNIWAVNKPNCIMSLTG
HTSPVQCVQFSSTEEQVVAGSESGSLRVWDLEAAKILRTLMGHKANICSLDFHPFGEHIA
SGSVDTNIKLWDVRRKGCVFRYKGHTQAVRCISFSPDGKWLASASDDSTIKLWDLTAGKL
ITEFTAHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFKLIGSSEGETGPVRCMLFSP
DGSCLYSGSEDALRVYGWEPDRCFDVVHVGWGKVADFAICNSQMIGVSCSQMNVSSYVVD
LSRVKTSGSVIQGLIEDDKPLAAPTSKGPTLRRNYERPPTTCNTQKMKQHSDADRRSPEG
ERRSPSSDDEHDDKESNAEITNPDDYKEIFQPRNAICETSLRTPPKKSEPFPAPFVEERY
PVKPSPAAEVFTPIPDKLKASNATSTPILRVEPTVVASTSARPVSVVTASVALPSRNIVP
TSKQKPSPVVIPSACNELVGLNVGDFLPPTRTGKTSVTADDEALNQIRKGHETMCVMLTS
RHKNLDTVRTVWTGGDIKTSLDSAVSINDLSIVVDILNIVNLKPSLWKLDTCTTILPQIE
ELLQSKYESYVQTGYVSLKLILKRFWPLISETLTALPSVGVDITREERHQKCKACYKQLK
NLSNIIKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcagacgtcaccaaaatgtggtggaaactgcaggacatggtggcccactcc
agtaaagtgtcctcgctggtgttgggtaaatcaggccgcttgctggctactggaggagag
gactgcagggtcaacatctgggccgtcaacaaacctaactgcattatgagcttgacgggc
cacaccagcccagtgcagtgtgttcagttcagcagcacagaggaacaggtggtggccggc
tctgaatcgggctctttaagagtgtgggacctagaagctgctaaaatactccggacgtta
atgggacacaaggctaatatctgcagtctagactttcatcctttcggagagcacatcgcc
tctggctctgtggatactaacattaagctgtgggatgtaaggaggaaaggatgtgtcttc
aggtataagggtcatactcaagcagtacgctgtatatccttcagtccagatggaaagtgg
cttgcttcagccagtgacgacagcacaattaagttatgggatttaacagctgggaagttg
ataacagaatttacagctcacacatcagcagtcaatgtagtccaatttcaccctaatgag
tatcttctggcctcgggcagtgctgacaggacggtgaaactgtgggatttggaaaaattt
aagctaatcggctcatcagaaggagaaacgggacctgtgaggtgcatgttgtttagtcct
gacggcagctgtctgtacagtggatcagaggatgccttgcgagtttatggatgggagcca
gaccgctgcttcgacgtggttcatgtaggctggggcaaagtcgctgactttgcgatctgc
aacagtcaaatgattggtgtatcgtgcagccagatgaatgtcagctcttatgtcgtggat
cttagccgagtgaagacgtcaggatctgtgattcagggattgattgaggatgataagccg
cttgcagcaccaacttctaaaggaccaacgttaaggcgtaattatgagagaccacctacg
acctgcaacacacagaaaatgaaacagcattcagatgcagacaggcgcagtccagagggg
gagaggcggagcccaagcagcgatgatgagcatgacgacaaggagagcaatgcagaaatc
acaaacccagatgactataaagagatctttcagcctcgcaatgccatctgtgagacatcc
ctacgcacacctcccaaaaaaagcgaacctttccctgcaccgtttgtcgaggaacgctat
cctgtgaagcccagtccagctgcagaggtttttactccaatacctgacaaactaaaagct
tcaaatgccacctccactccgattctgagagtggagcccacagtagtggcctcgacttca
gcacgtcctgtctctgtggtaactgcatccgtcgctttgccctcgagaaatattgtaccg
acatccaaacagaaaccaagtccagttgttattccctctgcatgcaatgagctggtcggc
cttaatgtgggtgatttcttaccacctaccaggactggtaagaccagcgtcacagcagat
gatgaggctctaaatcagatcagaaaaggacatgaaacgatgtgcgtgatgctgaccagc
cgacacaagaatcttgacacggtcagaactgtctggactggtggagacatcaagacatca
cttgactctgctgtttccatcaatgatctgtccatcgtggtggacatcctcaacattgtc
aacctcaaaccatcactctggaaacttgacacctgcaccaccattttgcctcagattgaa
gagctgctgcagagtaaatacgagagttatgtgcagactggctatgtgtctttaaagctg
attttgaagcgcttttggccgttgatctcagagacgctgacggctcttccatctgttgga
gtggacatcacacgggaggagaggcatcagaagtgcaaggcctgctataaacagctgaaa
aacctcagtaacattataaagaaccgggcagagcaagttggtcgccatggcagcactttt
aaagaacttcagctacttatggctccgttggactactaa
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