Astyanax mexicanus (Mexican tetra): 103029941
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Entry
103029941 CDS
T05042
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103029941 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103029941 (lsg1)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
GTPases
103029941 (lsg1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
RsgA_GTPase
FeoB_N
AIG1
Motif
Other DBs
NCBI-GeneID:
103029941
NCBI-ProteinID:
XP_022525257
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Position
5:8361837..8377825
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AA seq
637 aa
AA seq
DB search
MGKKKSTGLGRALIKERLGAARGNRRNDTWLHTSELNDGYDWGRLNLQSVTEQSSLDDFL
ATAELAGTEFIAEKLNVRFVPPEARTGLLTAEESKRLKKLHEDNRQFLRIPRRPPWDEST
SPEVLQQTERDTFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIERSDVVVQILDA
RNPLLFRCPDLEKYVKEVSGQKVNMLLLNKADLLTREQRRTWARYFQKEGIRAVFWSALA
EAARLEAEEKGEDVVEDEEMSDPEASVSYSETEGSATNSNEKEMKNNNEKEEEEEDDDEE
ESIEEIFEDCTSEADWQTCSEASGDEGEEGARKSSSFYNSSRLLHKDELLEMFKSAHSGP
TCKEGQLTVGLVGYPNVGKSSTINTIFQNKKVSVSATPGHTKHFQTLFVEPSLCLCDCPG
LVMPSFVSTKAEMICCGILPIDQMRDHVPAISLVCQTIPRTVLEGTYGFNIIRPREDEDP
DRPPTAEELLAAYGCMRGFMTAHGQPDQSRSARYVLKDYVSGKLLYCHPPPHINPEDFQP
QHAKFSCPSAQSDPSNCTIGSSKVKRIENSVDKHFFHQENVRALTKGVQMVMGYRPGCGP
VKQGQAGSEQPVGKPWKKHGNRNKKEKVRRLNKHLDS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaagagcacgggcctgggcagggccctgattaaagagagactcggagcg
gcgcgggggaaccggaggaacgatacctggctacacaccagtgaactgaatgatggatat
gactggggtcgtctgaatcttcagtctgtgaccgagcagagctcactggatgatttcctg
gccacggctgaactcgctggaactgaatttattgcagagaagctgaacgtgaggtttgta
ccgcctgaagcccggactggattactaacagccgaagagtccaaaagactgaagaagctc
catgaagacaacagacagttccttcggatcccacgaagacctccgtgggatgaaagtacg
agccccgaggttctccagcagactgaaagagacactttcctcacatggagacgagatttg
gcgaggctggaggaggaacagaagttgattcttacaccttttgagaggaacttggatttt
tggaggcagctctggagagtcattgagagaagtgatgtcgtggttcagattcttgatgcc
agaaaccctcttctgtttcgctgtccagatctagagaaatatgtaaaagaggtgtccggt
cagaaggttaacatgctgcttttaaataaagctgatctcctcactcgagaacagcgacgg
acctgggccaggtacttccagaaagaaggtatcagagccgtgttctggtccgctctggct
gaggcagcccgactggaggctgaagaaaagggagaagatgtggttgaggatgaggagatg
agtgatccagaagcttcagtcagctacagtgaaactgaaggatcagcgacgaatagtaac
gaaaaggaaatgaaaaacaataatgagaaggaagaggaggaggaggatgatgatgaagaa
gagagtatagaggagatttttgaggactgtacctcagaagcagactggcagacctgctca
gaggcgtcaggagacgaaggagaggaaggagcacgcaaatcatcttcgttttataactcc
agccgtctgctgcacaaagacgagctgctggaaatgtttaaatctgcacattctggaccc
acatgcaaggagggacagctgaccgtcggactggttggttatcctaatgttggcaaaagc
tccactatcaacaccatcttccagaataagaaggtgtcagtatcggctacacctggacac
actaagcactttcagactctgtttgtggagcccagcctctgcctgtgtgactgtcctggt
ctggtcatgccttccttcgtgtcgaccaaagctgaaatgatctgctgtgggattctcccc
atcgaccagatgcgagaccacgtcccagctatttccctcgtttgtcagacgatcccaaga
accgtgcttgagggaacgtacggcttcaacatcatcagaccaagagaggacgaagaccct
gatcgcccacccaccgctgaggagctgctcgctgcgtatggatgtatgaggggcttcatg
acagcacatggtcagccggaccagtccagatcagcccgatacgttctgaaagattatgtt
agtggaaagctgctctactgtcaccctcctccccacattaaccctgaagacttccagcct
cagcacgccaagttttcctgcccctctgctcagagtgatccctctaactgcaccatcggg
tcttcaaaagtcaaacggatcgagaattctgtagataaacacttctttcatcaggaaaat
gttcgggctctaaccaagggtgtgcagatggtgatgggctacaggccgggctgcggtcct
gtgaaacaaggacaagctggatcagaacagcctgttggaaagccgtggaaaaaacacggc
aacaggaataagaaggagaaagtgagaagactcaataagcacctggactcctga
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