Astyanax mexicanus (Mexican tetra): 103032698
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Entry
103032698 CDS
T05042
Symbol
usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103032698 (usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103032698 (usp40)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103032698 (usp40)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103032698 (usp40)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103032698 (usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
103032698
NCBI-ProteinID:
XP_007257240
Ensembl:
ENSAMXG00000010176
UniProt:
A0A8T2M6L1
LinkDB
All DBs
Position
13:complement(1031423..1047642)
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AA seq
1259 aa
AA seq
DB search
MFGDLFEQDEEGLGDSGAGVHTGGGKEHEPQPPRGPIRLSGIRNQGGTCYLNALLQTLLF
TPEFREQLFSLERSELEAEGDAGVRVIPLELQRLFARLLLLDEQTASTTALTDSFGWTNH
EETSQHDVQELNRILFSALESSLVGTSGSSLIQELYHGTLVNQITCKECKNVSERQEDFL
DLTVCVRGVSGLEEALWSMFVEEEVFEGNNLYRCSRCERLVCASKAAKLRKLPPFLTVSL
LRFSFDFEKCERYKETSTYSFPLSINLLPYCEQSSLSDSEFSYELFSVIIHKGGCYGGHY
HVYIKDIDQLGHWEAPEEDVKEKEKVQVKPQSLNEFDVTLEAEDPMAALIAVIAQEPSGS
VMLDQLGQKLMGRIGSSWNKKFRKQYGPISKFLQSRSDVFLLVSNGSRVTLNPKYTLTHS
HTNGQEMAEEQQGMGPDMGLEVEVGIEPDSELGAVSDIGNGAEPESGYHWFDLNDSTVTP
IKEQDIKKQFKGKESAYMLFYRKCTLQRPPDAKGNPAYKVPPHLLEMIQEENARLQQKRL
EFEASSNSVELRLHLAPFYRVQNGALQPVSTNTSPTSMTFDRRKPVGDLRLTVYQMQDQW
EGDMALTIAKHLPAGLHLYNTLADDQQSLYSAGISNGCDLFVWNGREVNGVQVQVGAEWE
PVLLTVMRPQDAGCEPVDGSGLQRSSHGFPRALTLDHVREALGPQEALVCQEEKRAGPDG
GGASGWRVCSTEAMRKTLRELTLRDGDTLLLLPPTHTCDSVFSVNGDLVTVMTPSDCRWL
KVQFQLQSGMEEEEECLMRKIPASGDTMLEEVKLRALEELQLQEQFAGVPCCLRQMDRMG
KLLPPVREDLSVRDAGVRLMTSLYLCPGPSLKTTQIFLYCRVSTEASSVPELELIVEETL
SVKECLMEVIRAAGMEGACWHLRRMDWCEEVGEPLRDENMSLLEVGVSNGDTMVLTEGQL
PPKGFLKLGVSWCEDSGSECAPVDGVCVSADPEQNHTADRSHTTGWAGVKCGFVEISEEA
SLQDLKCQVMTLPALMDVCVPTPEFLRVWLLEEQRATRILRGNTQTLRKLKVVCGSELCV
QKLQCEENLGLKDVLLRVRMGVPGEREYYPSMEFVWDAGRDPSAKGLYSSLSSLYGILPD
NLLVAKYLPDKHTWMPIHNWTQQVSKRKKKKKVDSVQGAPYYLRDGDIIGVKNLLVDSNK
EFSTLQDEQAQQKLREQNESHKKGGRGEVSQETCTEGKTRATKRRKPEVALSINVGVFR
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggatctgtttgagcaggatgaggagggcctgggggactcaggtgcaggtgtg
cacactggtgggggtaaagagcatgagccacagcctcctagaggtcccattcggctgagt
gggatccggaaccagggtggtacctgctacctgaatgccctgctgcagacgctgctgttc
acacctgagttcagagagcaactgttcagcttggagcggtcggagttggaggccgaagga
gatgcaggggtgcgggttattccactggagctgcaaagactgttcgcacggctgctactt
ttggacgaacaaacagcatcaacaaccgccctaactgacagctttggttggaccaaccat
gaggaaacaagtcagcatgacgttcaggagttaaacaggatattgtttagtgctcttgaa
tcttctctggttgggacgtccggcagctctctgatccaagaactttaccacggaacgctg
gtcaaccaaatcacctgcaaggagtgcaaaaatgttagcgagagacaggaggacttcctt
gatctgactgtgtgtgtgcggggtgtgagtggcctggaggaggcgctgtggagcatgttt
gtggaagaggaagtgtttgaggggaataacttgtatcgctgcagtcgttgtgaacgcctt
gtgtgcgcctccaaggctgctaagctaaggaagctccctccattcctgactgtttctttg
ctccggttcagttttgattttgagaaatgtgagcgttacaaagagacaagcacctacagc
ttccccctcagcatcaaccttctgccctactgtgaacagtcaagcctgtcagattcagag
ttttcctatgagcttttctctgtaatcattcacaaaggaggatgctatggaggacactac
catgtctacatcaaagacatcgaccagcttggccactgggaggcaccggaggaggatgtt
aaagagaaggagaaggtccaggtgaaacctcagagtttgaacgagtttgatgtcacttta
gaggcagaggatccaatggctgcactaattgcagttatagctcaggagccgtctggaagt
gtgatgctggaccagctgggtcagaagctgatgggcagaattggctcctcatggaataag
aagtttagaaaacagtatggaccaatcagtaagttcttgcagagccgttcggatgtgttc
ctgctggtctcaaatgggtcccgtgtgactctgaatcccaaatacactcttacacactct
cacaccaacggacaggagatggcagaagagcagcaggggatgggacctgatatgggactg
gaggtagaagtgggaatagaaccagacagtgaactgggagcggtgtctgatattggtaat
ggagcagaacctgagagtggttatcactggtttgatctgaatgactcgacggtaacgcca
atcaaagagcaggacatcaagaagcagtttaagggaaaagagagtgcctacatgctgttc
taccggaaatgcaccctgcagagaccaccagatgcaaaaggaaacccggcctataaagtg
cccccccatctactagagatgatccaggaggagaatgccaggcttcagcagaagaggttg
gagtttgaagccagcagtaacagtgttgaacttcgactccatctggctcctttttaccga
gtccagaacggcgctctgcagccagtcagcaccaacacctcgcccaccagcatgaccttt
gaccgcaggaaaccagtgggagacctgcgtttgactgtctaccagatgcaggatcagtgg
gagggtgacatggcactgaccatcgctaaacacctgcctgcaggattacacctgtacaac
acactcgcagacgaccagcagtctttgtacagtgcaggaatttctaacggttgtgacctg
tttgtgtggaatgggagagaggttaacggtgttcaggtgcaggttggagcggagtgggag
ccggttttattgacggttatgaggccacaggatgctggctgtgaacctgtagatgggtca
ggcctccagcgttcctcacacgggttccctcgggctctcacactcgaccatgtgcgggag
gcactgggcccacaggaggcgctggtgtgccaggaggaaaagagggcggggccagatggt
ggtggggccagtgggtggagggtgtgttccactgaagccatgcgcaaaacactacgggag
ctcaccctccgagatggagataccctgttgttactaccgccaacacacacctgcgacagt
gtgtttagtgtgaacggggatttggttactgtaatgacgccctctgactgtcgttggctg
aaagtacagtttcaactgcaatcaggaatggaggaggaggaagagtgtctgatgaggaag
attccagcctcaggagacacgatgctagaggaggtaaagctgagagcactggaggagttg
cagcttcaggagcagtttgcgggtgtgccatgctgtctgaggcagatggaccgaatggga
aaactattgccaccagtccgtgaagacctgagtgtgcgtgatgcaggtgtcaggttaatg
acatcattatatttgtgtcctggaccctctctaaagactactcagatattcctgtactgc
agagtgagcacagaagcatccagtgttccagaactggagctcattgtggaggaaactctg
tcagtaaaggagtgtctgatggaggtgattcgagcggccggaatggagggagcctgctgg
catttgaggaggatggactggtgtgaagaggttggggagcctctcagggatgagaatatg
tctttgttggaggtgggtgtgtctaatggagacacaatggttctcactgagggacagcta
ccccccaagggattcttaaagctgggagtgagttggtgtgaggactcaggcagcgagtgc
gcaccagtggatggtgtgtgtgtgtctgctgatccagagcagaatcacacagctgacaga
tcacacactacagggtgggccggggtgaagtgtggttttgtggaaatctctgaagaagct
tcattgcaggatctcaagtgccaggtgatgacgctgccggcgttgatggatgtgtgtgtg
cccacacctgaatttctccgggtttggcttctggaggaacagagagccactaggattctc
agaggaaacacacaaacactcaggaagctgaaggtggtgtgtggaagtgagctgtgtgtt
cagaagctgcaatgtgaggaaaatctggggctgaaggatgtgctgctgagagtgaggatg
ggcgtgccaggagagagggaatattacccctctatggagttcgtgtgggatgctgggcga
gacccctcagctaaggggctttacagctctctctcttccctctacggcattttacctgat
aacctgcttgtggccaaatacctgccagacaaacacacctggatgcccatccataactgg
acgcagcaggtctcgaaacgaaagaagaaaaagaaagtggacagtgttcagggagctccg
tattacctcagagatggagacatcatcggtgtgaagaatctgcttgttgacagtaataaa
gagttcagtacgctgcaggatgaacaggcccagcagaaactcagggaacaaaatgaaagc
cacaaaaaaggagggcgtggtgaggtcagccaggagacgtgtactgagggaaagaccaga
gcaactaaacgcaggaagcctgaagtggccttgtctatcaatgtgggtgtgttcagatag
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integrated database retrieval system
