Astyanax mexicanus (Mexican tetra): 103033957
Help
Entry
103033957 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04260
Cardiac muscle contraction
amex04261
Adrenergic signaling in cardiomyocytes
amex04270
Vascular smooth muscle contraction
amex04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103033957
04020 Calcium signaling pathway
103033957
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
103033957
09153 Circulatory system
04260 Cardiac muscle contraction
103033957
04261 Adrenergic signaling in cardiomyocytes
103033957
04270 Vascular smooth muscle contraction
103033957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103033957
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103033957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
PGA2
HemY_N
Motif
Other DBs
NCBI-GeneID:
103033957
NCBI-ProteinID:
XP_015456384
Ensembl:
ENSAMXG00000007496
LinkDB
All DBs
Position
6:complement(7168118..7233283)
Genome browser
AA seq
2052 aa
AA seq
DB search
MYEENRKSNGYSKEEEEGGGEGDEEEEEEGGGGEGDEGDWDDETQPRMNRTDTLNSTTSS
TATQKKKSQHAKKQVQGSNQVQRAPRALYCLKLNNPIRRAALSIVEWKPFDIFILLAIFA
NCVALGVSKPFPEDDSNATNHDLEQVEYVFLIIFTIETFLKILAYGLVMHPSSYIRNGWN
LLDFVIVIVGLFSVVLETMTHKHGGETHHMPGKPGGLDVKALRAFRVLRPLRLVSGVPSL
QIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMHKTCYYLGTDDYSDDEPVPC
AFAGHGRQCIINGSECRGRWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMNDAI
GFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLCG
YMDWITQAEDIDEYDEDGNRRVTLRDLADKKRGKFGWFSHSNETHASLPASETASENTEN
IEEEHTDCCAACCARIMKIACCRTLRRWNRGVRRTCRKAVKSVTFYWVVLILVFLNTALS
ASEHYNQPEWLTDVQEIANKVLLSLFTVEMLLKMYSLGLQVYFVAFFNRFDCFVVCGGIL
ETVLVEMEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASLLLLLFLF
LIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGEDWNMVMYDGIMAYGG
PVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGGDGDDKKKEEKKEGEEAQEGEET
EEAKVDMDEYEEEQEEHEEADDEEGGAQLNVADFAPPKEKILPIPDGSAFFCLSKTNPIR
VGCHILIHHHIFTNLILVFIILSSISLAAEDPIRAHSARNNFLGYADYAFTSIFTVEILL
KMTVHGAFLHKGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCVFVAIRTIGNIMIVTALLQFMFACIGVQLFKGKFYRCTDEAKHTPEQCK
GTFVVYKDGDVTRPMVRQRLWLNSDFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANGE
NHGPVYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELDKNQRQCV
EYALKAQPLKLYIPKNPVQYKFWSMINSTGFEYIMFVLILLNTVTLAVQHYEQSKLFSYV
MDILNMVFTGLFTIEMIVKLLALRLRHYFMDAWNSFDALIVVGSVVDIVVTEFSSSEDSS
RVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALPYVALLIAMIFFIYAVIGMQT
FGKIAMQDYTPINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDYEPGE
EFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSE
YDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLF
ALVRTALKIKTEGHADQENEELRIIIKKIWKRMKPKILDEVIPPVSEEEVTVGKFYATFL
IQDYFRKFRRRKEKVGLGEPDPKNPSALQAGLRTLQDLGPEIRLAMNADMEEEEEGMEEE
QEEDDAHYMNEKGYAEHPAKDRRASLASTPTGTSASVLGEGISNGGPSRRASLAKTPNGS
SLLEQENFTRGENMRSSFHYHNKNGVIEQQPKRASYYKHPRRDSRDRFSSPLSRRMDGEE
GYPGEQNFYREDDEEAAMSRYRHGYPEEGPVYPGQREHGYDAHLTYNNHYGNGYVEARRT
ARRRLLPATPTGRKPSFNIQCLRRQGSNDDLPIPGTYHQNSPPCRARGQPYGSYDSRRSS
SHSSMGSTASWANPSPRRGRLLYAPLILVEDEVAGGAGGVGIWDKKAGSTNVPVAEHPGW
YSGSSGGRAAQPYRAYTTLRVPTQLSPHYSEKRGSADSLVEAVLISEGLGLYAKDPKFVA
FAKREIADACHMTIDEMESAASDLLSRGSTASSGGGGFLNHTDLGPLYSDEEPVRGRDED
ELADEMTCVTSF
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggagaaccgaaaaagcaatgggtactccaaagaggaggaggagggtggcgga
gagggggatgaagaagaggaggaggagggaggaggaggagaaggggatgagggagattgg
gatgatgagacgcagccgcggatgaaccgcacagacacgcttaactccaccaccagctcc
acggcaacgcagaagaagaagagccagcacgccaagaagcaggtgcagggctccaaccag
gtgcagcgcgccccacgagccctctactgccttaaactgaacaaccccatccgccgagcc
gcactgtccatcgtagagtggaaaccttttgatatatttattcttctggctatctttgct
aactgtgtggctctgggagtgtccaagccttttcctgaggatgactccaacgctactaac
catgacctggagcaagtagagtatgtgtttctgatcatcttcaccatagagaccttcctg
aagattctggcctacggactggtcatgcaccccagctcctacatccgcaacggctggaac
ctgctggatttcgtcatcgtaattgtggggttgttcagcgtggtactggagacgatgacc
cataagcatggcggtgaaacacaccacatgccagggaaacctggaggcctggacgtgaaa
gccctcagagcctttagagtgttacgacctcttaggctcgtttcaggagtgcccagtttg
cagattgtgctgaattccatcatgaaagcgatggttcctctgttgcatatctctctgctg
gtcctgtttgtcattatcatctacgctataatcggcctggagctgtttattggccgcatg
cataaaacatgctactatcttggcacagatgactattcagatgatgaaccagtgccttgt
gcgtttgctggtcatggacgtcagtgcataattaatggttcagagtgcaggggcaggtgg
gacgggccgaacggtggcatcaccaactttgataacttcttctttgctatgctgacggta
ttccagtgcattactatggagggctggaccgatgtcttgtactggatgaatgatgctata
ggttttgagctgccttgggtgtactttgtgagtctggtcatcttcggatctttcttcgtg
ctcaaccttgtgttgggtgtgttgagtggtgaattctctaaggagagagagaaggctaaa
gcacgaggagacttccagaagctgagagagaagcagcagctggaggaagatctgtgcggt
tacatggactggatcacacaggccgaggacatcgatgagtatgacgaggacggaaacaga
cgtgtgaccctgcgtgacctggctgataaaaaacgaggaaagtttggctggttcagccac
tccaacgaaactcacgcaagtcttccagctagtgaaacagcttctgagaacacagaaaat
atagaggaagaacacactgactgttgtgctgcttgctgcgctcgcattatgaaaatcgct
tgctgccgcactttgcgtcgctggaaccgcggggttcgacggacgtgtcgaaaagcggtg
aaatctgtgacgttttattgggtagtgctgatcctggtctttctcaacacagcactgagc
gcatcagagcactacaaccagccagagtggctcactgacgtacaggaaattgccaacaag
gtgcttctgtctctcttcacggtggaaatgttgctgaagatgtacagtctgggactgcag
gtctactttgtagcttttttcaaccgctttgactgcttcgtggtgtgtggaggcatcctg
gagactgtgctggtagaaatggaaatcatgccacctctcggcatttctgtgctgcgctgt
gttcgcctgcttaggatcttcaaagtcacccggcattggacggcgttgtctaatctggtg
gcatctctgctgaactctatgaaatccattgcatctctgctgctgttgcttttcctcttc
ctcatcatcttcgctctgctgggcatgcagctctttggtggcaaatttaactttgacgag
acgcagaccaaacggagcacctttgacgctttcccccaggcgctcctcacatgcttccag
atcctgacaggtgaggactggaacatggtgatgtatgatgggatcatggcgtatggaggc
cctgtgttccctggcatgattgtatgtctgtattttgtcattctcttcatctgtggtaac
tacatcctcctaaatgtcttcttggctatcgctgtggacaacttggcaggaggagacgga
gatgacaaaaagaaagaagaaaagaaggaaggagaagaggctcaggaaggagaggagact
gaagaagcaaaggtggacatggatgaatatgaggaagagcaggaagagcatgaagaagca
gatgatgaagaaggaggagctcagttgaatgtggctgattttgctccgcctaaagaaaaa
atcctgcccattccagatggcagtgctttcttctgcctcagcaagaccaacccaataaga
gtcgggtgtcacattctgatccatcatcacatcttcactaacctgatcctggtcttcatc
atcctcagtagtatctcacttgctgctgaggacccaatcagggctcactctgctaggaac
aatttcctgggctacgccgactacgccttcacctccattttcacagtggaaatacttctc
aagatgactgtccatggggcattcctgcataagggctcgttctgtaggaactggtttaat
ctattggacttgcttgttgtcagtgtatctctggtctccttctttcttcactcgagtgct
atatctgtggtgaaaatcctgagagtgctgcgagtgctcaggcctcttcgagccatcaac
agagccaagggactcaagcacgtggtccagtgtgtgtttgtggctatcaggactatcggg
aatatcatgatcgtcactgcactgcttcagttcatgtttgcctgcattggtgtccagctc
tttaagggtaaattttatcggtgcacagatgaagcgaaacacacacctgagcagtgcaaa
ggaacctttgtggtatataaagatggtgatgttactcgtccgatggtgcggcagcgcctc
tggctcaacagcgactttaactttgacaacgtgctcatgggcatgatggccctgttcact
gtatctacttttgaaggctggccagcacttctctacaaagccatagatgcaaacggggag
aaccatggccccgtctacaactaccgcgtggagatctctatcttcttcatcgtctacatc
atcatcatcgctttcttcatgatgaacatcttcgtgggttttgtcatcatcacgttccgt
gagcagggagaagctgaatttaaaaactgtgagctcgacaagaaccagagacagtgtgta
gaatatgctttgaaagcccagcccttgaagctgtacatccctaagaacccagtgcagtat
aagttctggtctatgatcaactccacagggtttgaatacatcatgtttgtgttgattctc
ctcaacacagtgactttggctgttcagcactatgaacagtccaaactcttcagctacgtc
atggacatcctcaacatggtcttcaccggccttttcactatagagatgatcgtcaaactc
ttagccctcagactccggcattattttatggatgcttggaactcctttgatgctctgatt
gtggtgggaagtgtggtggacatagtggttacagagtttagtagctcagaggacagctct
cgagtttctatcacattcttccgtctgtttcgtgtgatgcgattggttaagctgctcagc
aaaggggaaggcatccgcacgctgctgtggacctttataaaatctctgcaggcccttcct
tatgtagcgctgctcattgccatgatcttcttcatctatgctgtgatcggcatgcagaca
tttgggaagattgccatgcaggactacacgccaatcaaccgcaataacaacttccagacc
tttccccaagcagtcctgctgctcttcaggtgtgccacaggtgaagcatggcaggagatc
atgttggccagcctgccgggaaagcgatgtgaccctgagtcagattatgagcctggtgag
gagttcacctgtggcagcaactttgccatcgtctacttcatcagcttcttcatgctttgt
gcttttctgattatcaatctctttgtggctgtcattatggacaattttgactacttgaca
cgtgattggtcaattctggggccgcatcatctggatgagtttaaaaggatctggtcagag
tatgatcctgaggccaagggtcgcataaagcatttagatgtggtggctctactcagaagg
attcagccacccctgggttttggaaaactctgtccccaccgtgtggcctgcaagaggctg
gttgctatgaacatgcctttaaattctgatggcacagtgaccttcaacgccacgctgttt
gccctagtcagaactgccctgaagattaaaactgagggtcacgcagatcaggaaaacgag
gagctgaggatcatcattaagaagatctggaaacgcatgaagcccaaaatcctggatgag
gttattcccccagttagtgaggaagaggtgactgtgggcaagttctatgcaacgttcctg
attcaggactacttcagaaagttccgtaggaggaaagagaaagtgggtctaggagaaccg
gaccccaaaaacccatcagctctccaggcaggcctgcgtaccctgcaagatctggggcca
gagattcgactggccatgaacgcagatatggaggaggaagaggaggggatggaggaagag
caagaggaggatgatgcacactatatgaatgagaaaggttacgctgaacacccagccaaa
gaccgccgtgcatctctggcctccacgccgactggtacatctgcttctgtcctaggagag
ggcatctccaacggtggtccatcccgcagggcctccctagctaaaacgcccaatggcagt
agcctattggagcaggagaatttcacaagaggagagaacatgcggtcctccttccattac
cataataagaacggggtgatcgagcagcaaccgaagagggcatcatattacaagcaccca
aggagagactcgagggaccgctttagctctcctctatcacggagaatggatggagaggag
ggatatccaggagaacaaaatttctacagagaggatgatgaggaggccgctatgtccaga
tacaggcatggctacccagaagaggggcctgtgtatcctggccaaagagaacacgggtat
gatgcccatcttacgtataataaccattatgggaacggctatgtggaggccaggaggaca
gccaggagacgactgcttcctgcaacccccactgggcggaagccatcattcaacatccag
tgtctgaggaggcagggcagcaatgacgatctccccatcccaggcacctaccatcagaat
tctccaccttgcagagcacgtggacagccgtatggcagctacgactcccggcgcagcagc
agccactcttccatgggctccaccgcctcctgggccaatcccagccctcgacggggtcgc
ctgctgtatgcaccgcttattctggtggaggatgaggtggcgggcggtgctggaggtgtg
ggcatctgggataaaaaggctggaagtactaatgtgcctgtggcagagcatccgggctgg
tactcagggtcctcaggtgggcgagcagcccagccttacagggcgtacaccactctgaga
gtgcccacccagctcagtccacactacagcgagaagagagggagtgctgacagcctggtg
gaggcggtattaatttctgagggtcttggcctttatgctaaagaccccaaatttgttgcc
ttcgccaagcgggagatcgctgatgcatgtcacatgaccatagacgaaatggagagtgca
gccagtgacctgttgagccgggggagcacggcgagctctggaggaggggggttcctcaac
cacacagatctgggacccttgtacagcgacgaagagccggtccgggggcgagatgaggat
gaacttgctgatgaaatgacatgtgttacctccttctga
DBGET
integrated database retrieval system
