Astyanax mexicanus (Mexican tetra): 103035634
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Entry
103035634 CDS
T05042
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
103035634 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103035634 (hdac5)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103035634 (hdac5)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103035634 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
103035634
NCBI-ProteinID:
XP_022523752
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MLLRPTVPGLCAMLQTIYETESCFSTDTHSTASREQPTDLLPHNHSNNMSSTAVEVKSSL
SPGMQSPVGGGGGGGEQGGGGGGGGGGGGGGGGGGGGPVDLRTDPRLNALSGMDPALREQ
QLQHELLLLKQQQELQKQLLFAEFQKQHEVLTRQHEVQLQEHLKQQQELLAVKRQQELEQ
KRKLEQQRHEELEKQRLEQQLIMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPLSGGLN
HSFTQKCWGAHHTSLDQSSPPQSNTPGTPPSYKLPPLLGSYEGKDDFPLRKTASEPNLKV
RSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIA
ENGSSGSVPNIHAEQLRSLHQSLNADGTVSPLSLYTSPSLPNISLGLPANAHITAPQKLS
VQQDAERQALQSLRQGGALTGKFVSTSSLPSHEPDPAAPTNSHSTHSSLLQHVLLLEQAR
QQSALLAVPMYGQSPLVTGERVSNNMRTVTKLPRHRPLSRTQSAPLPQTPQALQHLVMQQ
QHQHFLEKQKHYQLNKILSKGAELPRQPPTHPEETEEELTETAEMSEERGEGPEHVRQGL
QKDSSGETTPPSERVVTLKGESTESDLEEEDDEDEAIELKECDEDAPYGQFSDQQHLQQL
NVFQASLSITGMPHRPLGRAQSSPITSSLKGTPMGELPIKHLFTTGLVYDTLMLKHQCMC
GNTHIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLN
RQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAG
ELKNGFAVVRPPGHHAEESTAMGFCFFNSVAVTAKLLQQKLGVGKILIVDWDIHHGNGTQ
QAFYNDPNVLYISLHRYDDGNFFPGSGAPEEVGVGPGVGFNVNIAWTGGVEPPMGDVEYL
TAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRV
VLVLEGGHDLTAICDASETCVAALLGDELDPLPQPVLQQKPCPKATASLERVIEIQGKHW
SSVQRSAPTVGQSLLDAQRREKDEADTVTAMASLTVDTEQTAASSQSSRAAEEPMEEEPV
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgcgaccgacagttccggggctgtgcgcgatgttgcagaccatctatgagaca
gaatcctgcttctccacagacacacacagcacagccagccgggagcagcccaccgacctg
ctgccccacaaccactccaacaacatgagcagcactgcggtggaggtgaagagctcgctg
tctcctggcatgcagagtccagtgggcggtggaggaggaggcggggagcagggtggagga
ggcggtggtggaggcggaggaggaggaggtggaggaggaggaggaggagggccggtggac
ctgcggacggaccctcggctaaacgccctgagcgggatggacccggcgctgagggaacag
cagctccagcacgagctgctcctgttgaagcagcagcaggagctccagaagcagctgctc
ttcgccgagttccagaagcagcacgaggtcctgacccgccaacatgaggtccagctgcag
gagcacctcaagcagcagcaggagctcctggcagtgaagcgtcagcaggagctggagcag
aagaggaagctggagcagcagaggcacgaggagctggagaagcagaggctggagcagcag
ctcatcatgctccgcaacaaggagaaaggcaaagagagtgccatcgccagtaccgaggtc
aaactgaagctccaggagttcctgctgagtaaaaaggagcccctctctggcggactcaac
cattccttcacccagaagtgctggggtgctcaccacacgtctctggaccagagttccccg
ccacagagcaacaccccaggcacccccccatcttacaaactgcccccactgctggggtcc
tacgagggcaaggatgacttccctctccgcaagactgcctctgaacccaatctgaaggtg
cgctcacggttaaaacagaaggtggctgaaaggaggagcagtcctctactccgccgcaag
gatgggactgtcatcagcactttcaagaagagagccatcgagatctcggtctcttcaatg
tgcagcagcgctccaggctcgggtcctagctcccctaacagctccaacagtgccatagcg
gagaacggctccagcggctccgtcccaaacatccatgctgagcagctgcgttctctgcac
cagtctctgaatgcggacggaacagtgagccccctcagcctgtacacgtcaccctctctg
cccaacatctccctgggtctgccagctaacgcacacatcactgcccctcagaagctgagc
gttcagcaggatgcggagcggcaggctcttcagtccctccggcagggcggggctctgaca
gggaagttcgtgagcacctcgtctctgccgtcccacgagccggaccccgcggcccccaca
aacagccacagcacacactcctccctcctgcagcacgtcctgctgctggaacaggcccgc
cagcagagcgccttgctcgcagtgcccatgtatggccagtcacccctggttacaggcgag
cgcgtgtccaataacatgcgaacggtgaccaagctgccccggcatcgtccactgagccgc
acacagtcggcccctttaccgcagacgcctcaggccctgcagcacctcgtcatgcagcag
cagcaccagcacttcctggagaagcagaaacactaccagctcaacaagatcctttccaaa
ggggcggagcttccccgccagcctcctacccacccggaggagacggaggaggagctcacg
gaaacagcagagatgtcagaggagcgaggggagggacctgagcatgtgagacaggggctt
caaaaggacagctctggcgagaccacgcccccttcggaacgagtggtcactctgaagggt
gagagcacggagagcgacctggaggaggaggacgatgaagatgaagccatcgagctgaag
gagtgtgatgaggatgctccatacggacagttctcagatcagcagcacctgcagcagctg
aatgtattccaggcttctctgtccattacgggaatgccccacaggccgctgggacgggcg
cagtcctcccccatcacctccagtcttaaagggacgcccatgggcgagttacccatcaag
cacctcttcactacagggctggtgtatgacaccctcatgctgaagcatcagtgtatgtgt
gggaacacacacatccaccccgagcacgccggtcgcatccagagcgtgtggtccaggctt
caggagaccggcctgctgggccgctgtgagaggatccgaggcaggaaggccacgctggac
gagatccagacggtgcactctgagtaccacacgctgctgtacggaaccagtcctctcaac
aggcagaagctggacagcaagaagcttttaggtccaatcagtcagaagatgtatgctgtt
ctaccctgtggaggcattggggtggacagtgacacggtgtggaatgagatgcactcctca
ggcgctgtgagaatggcggtgggctgcgtcatcgagctggcctttaaagtagcagctgga
gagctaaagaacgggttcgcggtggtccgtcctcccgggcaccatgctgaggagtccaca
gccatggggttctgcttcttcaactcagtggccgtcacagccaagctgctccagcagaaa
ctgggcgtgggaaaaatcctcatcgtagactgggatattcatcatggtaacgggacccag
caggccttttacaacgatcccaacgtgctgtacatctccctgcatcgatacgatgacggc
aacttcttccccggcagtggagctcctgaagaggtgggcgtggggccaggagtgggcttt
aatgtgaacattgcctggacaggaggagtggagcctcccatgggggatgttgagtacctc
acagccttcaggacagtggtgatgcccattgctaacgaattctcccctgacgtggtgctg
gtgtcggctggcttcgacgccgttgaaggccaccaatcccctcttggcggctacaacgtc
accgctaaatgttttggtcacctaaccaagcagctgatgaagctggcaggtgggcgcgtg
gtcttggtgctggaggggggtcacgaccttaccgctatctgcgacgcttctgaaacctgc
gtggcggctttgcttggagacgagttggatccactgcctcagcctgtgctccagcagaaa
ccctgtccaaaagccacagcctcccttgaaagagtcattgagattcagggtaaacactgg
tcctcggtgcagcggtcagcccccacagtgggtcagtctctgctggacgctcagcggcgg
gagaaggacgaggccgacactgtgacggccatggcctccctcaccgtggacacggagcaa
acagcagcctcctcacagagcagcagggctgccgaggaaccaatggaggaagagcctgtg
ttgtag
DBGET
integrated database retrieval system
