Astyanax mexicanus (Mexican tetra): 103037484
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Entry
103037484 CDS
T05042
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103037484
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103037484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
GATA
ELM2
Myb_DNA-binding
CCDC47
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
103037484
NCBI-ProteinID:
XP_007246348
Ensembl:
ENSAMXG00000024776
LinkDB
All DBs
Position
15:complement(16751882..16792969)
Genome browser
AA seq
1317 aa
AA seq
DB search
MSDMDDLFSPRRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGHPVTENEELVWMPGVNDC
DLLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVK
KPVPKLIEKCWSEDEVKRFIKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAA
SSRAHRRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGY
ACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDG
LGGKHSMRTRRNRGPMSTLRSGRKKQTASPDGRASPTNEDLRSSGRTSPSAASTSSTDSK
TDSMKKPSKKIKEEAPSPMKSAKRQREKGSSDTEEPERANAKKSKTQELSRPDSPSECEG
EGEGESSDGRSVNDEGSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQVLQGQHPPV
IQCQAGALPPTASSSTATAPTPPTSGAPALPSQVSPSIPPTSMPPQQIPPTGPLPHIQSG
AALHPQRLPSPHSPMQGMPQPPAPSQTGPQPLQPPLHGPMPPMGHPLQTGPHLPHPHSLP
PQSFPHTQSQVPPSPLSGQALVSSLSQQQQPHTPPSQSQQSSSQSSGQPSREQPLPPAPM
SMPHIKPPPTTPIPQMQNPQSHKHPPHLSAPPFPQMPSNLPPPPALKPLSSLSTHHTPSA
HPPPLQPMPQQLQPPPAQPPVLTQSQTLPASSSHAPPPAPPLPPSAASSHPTPSQPTFPP
HPYIPGGSASIPPSSVPSSVAGPLAALQQPPSSISMPLPASVSAPCPGPSTVPPVQIKEE
PLDEAEEPESPPPPQRSPSPEPTVVNTPSHASQSARFYKHLDRGYNTCARTDFYFTPLPS
SKLAKKREEALEKAKREAEQRAREEKEKEREREKEREREREREKEAERAAKASSSSHESR
MGEPQMAGPAHMRPHFDPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFM
SLNPTEPLLAYHMPGLYNADPGMRERELREREMREREIRERELRERMKPGFEVKPPELDS
LHPSTNPMEHFARHGPIGLPPMAGHPFASFHPGLNPLERERLALAGPQLRPEMTYPERLA
AERLHAERMASVANDPIARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGGECLVCPPG
SGAHPLVDPLAAGPHLTRFPYPPGAIPNPLLGQPPHEHEMLRHPVFGTPYPRELPAGLPP
PMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHMHGAPLPGQEDYYSRLKKESDKQL
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatggacgacctgttcagcccgcggaggcgattaaacagcacacaaggggag
attcgagtaggacccagtcaccaggccaagctcccggagctgcaaccctttccctctcct
ggaggtcatcctgtgactgaaaatgaagagcttgtctggatgcctggggtcaatgactgt
gacctgcttatgtacctgcgggcagccaggagcatggcagcatttgcagggatgtgcgat
ggaggatcaacagaggatgggtgcctcgctgcctcacgagatgacactacactcaatgca
ttaaacactctacatgagagcagctatgatgcagggaaggccctacagcgactggtgaag
aagcctgtgcccaagctgattgagaagtgctggtccgaagatgaagtgaaacgcttcatt
aaagggttgaggcagtacggcaagaacttcttcaggattcggaaagagttgctaccaaac
aaggaaacgggagaattgatcactttttactattactggaagaaaaccccagaggctgct
agctcccgagcccaccgcagacaccgcagacaaccagtcttccgccgaatcaagacccgc
accgcctccacgcctgtcaacactccctctcgccctccttccagcgagttcttggacctg
agctcagccagtgaggatgacttcgacagtgaggacagcgagcaggagctgaagggctac
gcttgccgccactgctttaccaccacctccaaggactggcaccacgggggccgtgagaat
atcctgctgtgcaccgactgccgcatccattttaagaagtacggtgagctcccccccatc
gagaaacctgtggacccgccgccgttcatgttcaaacctgtcaaagaggaagaggatgga
ctcggtgggaagcatagcatgaggactcgacggaaccgcgggccgatgtcgacgctacga
agtggccgaaagaagcagacagcaagtccagatggcagagcctccccgaccaatgaggac
ctgcggtcaagtggccgtacctcccctagtgcagccagcacctccagcactgacagcaag
actgattcaatgaagaaacccagcaagaagataaaggaggaggcgccatcgcctatgaag
agtgccaaacgccagagagaaaagggatcctcagacacagaggagccagagagggccaac
gctaagaagtcaaagactcaggaactgagtcgacctgactcaccttcagaatgtgaggga
gaaggcgagggtgagagctcagacggtcgcagtgtaaatgatgagggcagtagtgaccct
aaggacattgaccaggacaaccgcagctcctctcctagcatccccagcccacgtgacaat
gaaagcgactcggactcgtctgcacaacaacaggtccttcagggccagcaccctcctgtc
atccagtgccaggcaggagctctgccaccaacggcctcttcttccacagccacagcaccc
acaccccctacgtcaggggcaccggcgctaccctcccaggtgtctccgtccatccccccc
acctccatgcctcctcagcagatacctccaacaggcccgcttcctcacatccagtctgga
gcggcgctgcaccctcagaggcttccctcacctcactcgccaatgcagggcatgccacag
ccgccggcaccctctcagaccggcccccagcctctgcagcctccactacatggccccatg
cctcccatgggccaccctctgcaaacagggccccatttgcctcaccctcattccctacct
ccacagtctttccctcacactcagtctcaggttcctccgtctccattatcaggccaggcg
ctagtctcatccctgtctcaacaacagcagcctcacactcctccatcacagtcacagcag
tcctcctcacaaagcagtgggcagccgtctcgagagcaacccctgcccccggcacccatg
tccatgccccacatcaaacctccacccacaacccctattccacagatgcaaaatcctcaa
tcacacaaacaccccccacacctctctgcacctcctttcccacagatgccttccaacttg
cccccgccgcctgccttgaagccactcagctcactgtccacgcatcacacaccctcagcc
cacccgcctccactgcagcctatgcctcagcagctgcagcctccccctgcgcagcctcca
gttctcacccagtcccaaacattgcctgcctcaagcagtcatgcgcctcctccagcacca
cctttgcccccttcagctgcctcttcgcatccaacgccttcccagccaactttccctcct
catccttacatcccaggtggctcagcatctatcccaccctcttccgttccttcctctgtg
gcgggacccctggctgcactgcagcaaccaccttcttccatctctatgcctctgcctgct
tcagtcagcgcaccctgcccaggaccctccactgtgccccctgtgcagattaaggaagag
cctctggatgaagcagaagagccagagagtcccccacctccacagaggagcccctcgcca
gagcccacagtcgtcaacacacctagccatgccagccagtctgcacggttttataagcat
ttggacagaggctacaacacatgtgcgagaacagacttctactttactccattgccatcg
tccaagctggccaagaagcgggaggaggcactagagaaagcgaagagggaagctgagcag
agagcacgggaagagaaagagaaggagagggaacgagagaaagagagagaaagggaacgg
gaacgagagaaggaggctgagagagctgctaaagcatccagttcttctcatgagagccgg
atgggagagcctcagatggcaggacctgctcacatgcggccgcacttcgatcctcctccc
accaccatcgctgccgttcctccttacattgggccagacacacctgccctgcgcacgctc
agcgagtatgcccggccccatgttatgtcccccaccaaccgcaaccacccattcttcatg
tcacttaatcccacagagcccttgctggcataccacatgcctggcctgtacaacgcagac
cctggcatgcgggagcgtgaactgcgagagcgggagatgcgcgagagggagatccgtgag
agggagctcagggaaaggatgaagcctggctttgaggtcaaaccccctgagctggacagc
ctgcacccctccacaaatcccatggagcactttgcccgacacgggcccatcggtttgccg
cctatggccggccaccctttcgcctcctttcacccgggtctgaaccctctggagagggag
cggctggcgctggcaggaccccagcttcggccagagatgacctaccccgagcgcctggca
gcagagagactgcatgctgagaggatggcctcagtggccaatgaccccattgccaggctg
cagatgttcaacgtgacgccgcaccatcaccagcattcgcacatccactcacacctacat
ctgcatcagcaagacccactgcaccaaggtggtggtgaatgtcttgtgtgtcccccaggt
tctggggcacatccgctagttgacccgctggctgctggaccccacctgacccgcttcccc
tacccgcccggcgccatccccaaccccctgctcggacagccaccacacgaacacgagatg
cttcggcaccctgtgtttggtaccccataccctagagaattgccagcgggtttgccgcca
cccatgtcagcagcacatcagctgcaggctatgcatgcgcagtctgcagagctgcagaga
ctggccatggagcagcagtggctgcacggacaccaccacatgcacggggcccctctgcct
ggtcaggaggactactacagccggttgaagaaggagagcgataagcagctgtga
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integrated database retrieval system
