Astyanax mexicanus (Mexican tetra): 103038457
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Entry
103038457 CDS
T05042
Symbol
ahdc1
Name
(RefSeq) AT-hook DNA-binding motif-containing protein 1
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103038457 (ahdc1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103038457 (ahdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
103038457
NCBI-ProteinID:
XP_007245752
Ensembl:
ENSAMXG00000025287
UniProt:
A0A8B9LGC2
LinkDB
All DBs
Position
23:29217780..29250749
Genome browser
AA seq
1407 aa
AA seq
DB search
MSRLSGRLRSGGVRYACEALAEEDCREAEGSWMGDVGPGVTSAGPTGSGPGNSLHYGFYS
PPSLANGLRNHDEQFQRRARRRRQMDHAEQMHTHEQVHIQQHTHPQMHTHQQTQSLEKNT
QMEQSNTHLPSHTCIQTDTEILMHKLSHTELDSHSSSSVMEHDTSLIPEDLSITSKTACS
NYPLQTSQPSQNYSALQHNPASTCKVESEQTAITTTCKPQVGHLPNPDICHSSSTSHNLV
SAPIEAERKYTLRSSGRPRFPCHLRKSSRLRRATEDSIVKREEEQKEEEEAVNIYRGDEI
RKESHPPKVPAVASTVEALPASTKPVARMVPNHSVSMPFGNESSTVTHHSTRGKRRGPFL
GVRKIVVKIARIPVHLSRRQKSYKISSLDLGVVPTRTESSAVTGEVPEKVPSSETIAPPP
REPTALLRMKNNGKSVMVMFPPGELPVILKRRRGRPPKQALPGQPDMRETRAGAANAAEP
KKPRRRRRVKLPSPLPSYVNDTNDVKAEYADVLSKLAFLNRQPLSTGRCSPPRCWTPTEP
ETFHTSPENPNLSTLLHRLTGFRRRGGRAGCMGGRGGGAAGCSEAFKRSFSDFFETIGKK
RKVPQSEPGTPRKRGKGAGAGTSRAAMTEQGSPVAGEKVRKRRPRKNGTLKGSQGLQDQD
WQNGNNGWGEKGDPDTPERAGSYHGSCSPRGNFSSSETGKGGVYHSPAMRGAGSGEEGMF
AGYFRSLLDSDDSSDLLDISMSSPTGRQDSRKLTPGYDGSSPGAVQRWSPAFPKRSPKGA
ACAGEGAALSSPPIPSNSAARPPFSYSVSQTSPTPSFPKSPALSLSRSPSSPHPSSSSFS
QYPSNYSGNVSQGSGICSVPQQQHRSSDCSFMYGTKAPPVSSTQRQLSFANYQTSAKRHY
SGYPGPAHPSMQQSESAGPASPSGSYMSISKTSPFSSSSSPPESCRQYQSSAQWGYRQGG
PVWGGDGFGSHQFHGYSEYGVGGTESKDILDISNYTPQKAKQRPCPDTLSESSSDSSHTG
LGSMGGQYCPRDIPVPEGQSSLSSLEKLMLDWNENSAGPSYNWSQNVLFQGGTKSGRGRR
KRSEQQNERESCSMPPGSPASPSMQGAGPKRSASAGRQPRGSRGRGGFSPCQRERSVPAK
AKPQKPTSTATAGQMTSAGSLYQETIDYYSGDSSSLSPLSHAPEPCEYPSPYSAHTSTPS
SEERFAQIYPTDSASLSPNLSTQPDVIKQYPKTGPQSQSYGHAARTFSPTLSPSPRLLPQ
CGSAMSPHRVSTKDQFPQYDSPSYSGSPCWYGQSGSVTNSPHSYEEQRSTAVALPSHKRD
TSLMGPGIRVPSQSPYPQPVNRGPAMSSSCASGALDSSPQHEELGYHGNMDSYAPLRQRY
VSQSAQSGVLCQLLDQPSDEGFTVTSL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactgtcaggacgtctgcgctctggaggtgtgcgttatgcctgtgaagctctg
gctgaggaggactgccgtgaggctgaaggctcctggatgggagatgtagggcctggagtc
acgtcagcagggcccactggctctggcccaggcaattcactacactatggattttactca
cctccttcactggctaatggcctgcgaaaccatgatgagcagtttcagcggcgagcaagg
agacgcagacaaatggaccatgcggaacaaatgcacacacatgaacaagtgcacattcag
cagcacacacatccgcagatgcacacacaccagcaaacacagtcactcgaaaaaaacact
caaatggaacagtcaaacacacatttaccgtctcacacatgcattcagacagacacagag
atactaatgcacaagctctcacatacagagctagacagtcattccagctcttcagttatg
gagcatgacacatctcttattccagaggacctgtctataacatctaagactgcctgttca
aactatcctttgcaaaccagccagccctcacaaaattattccgcccttcaacataaccct
gcttctacatgcaaggtagagtcagaacaaacagctatcaccaccacctgtaaaccacag
gtgggccacttaccaaaccctgacatatgccacagttccagcacaagccacaatctagtc
agtgcccccatagaggctgagagaaaatatactctgagaagttctggtcggccccgtttc
ccgtgtcaccttcgcaagtcgtcacgcttgcgtagagccacagaagatagcatagtgaaa
agggaagaggaacaaaaagaggaggaggaagctgtgaacatctatagaggagatgaaatt
agaaaggaatcacatcctcccaaagttcctgcagttgcttcaactgtggaggctctacca
gcatcaaccaaaccagtagccagaatggtgcccaatcatagtgttagtatgccatttgga
aacgaaagcagcactgtgactcaccactcaacaagaggtaaacgacgaggtcctttttta
ggtgtgagaaagatagtggtgaaaattgctagaattcctgtgcatctcagtcgtcgtcag
aaaagctacaagatctcttctttagaccttggggtagtaccgacacgtacagagagctct
gctgttactggagaagttccagaaaaggtacctagcagtgagaccattgccccccctcca
agggaacccactgctctcctccgcatgaaaaacaatgggaagagtgtaatggtcatgttt
cctccaggagagttacccgtcatcctcaaacgccgtagaggacgcccccctaaacaggct
ttaccaggacagcctgacatgcgtgaaactagagctggggcagcaaatgctgctgagccc
aagaaaccacgtcggcgaaggcgagtaaagctgccatccccactgccctcatatgttaat
gacaccaacgatgttaaagcagagtatgcagacgttctctctaaactggcttttcttaac
agacaacctctcagcactggtcgctgttcgccaccacgctgctggactccaactgagcct
gagacctttcacacatctccagagaacccaaacctgtccactctgctgcaccgtctcaca
ggtttccgtagacgagggggcagagcaggttgtatgggagggagaggaggtggtgcagct
gggtgctctgaggcttttaagaggtcgttcagtgacttctttgagacaattggcaagaag
cggaaagtaccacagtcagaaccaggaactccacgaaaaagagggaaaggggctggtgct
ggaactagtagggcagctatgactgagcaaggttctcctgtggctggggaaaaggtcaga
aaacgtcgtccacgaaagaatggtacattaaaaggcagtcagggtttgcaggatcaagac
tggcaaaatggaaataatgggtggggggagaaaggtgatccagatacccctgaaagagca
ggtagttaccacggctcttgctctccccgtgggaacttttcatcttctgagactggtaag
gggggagtgtaccacagtccagccatgagaggagctggcagtggagaagagggaatgttt
gcaggatactttcgctccctacttgattcagatgactcctcagacttgctggacatctcc
atgtcaagccctacaggtcggcaagactctcgtaaacttactccaggatatgatggcagc
agtccaggtgcggttcagcgatggtcccctgcgttccctaagagaagtcccaaaggagct
gcctgtgctggagagggggcagcactgtcttcacccccaattccaagcaactctgcagct
aggcccccattttcttacagtgtttcacaaacatctcccaccccttccttcccaaaatct
cccgctctctcactttcacggtcccctagttctccccatccatcttctagtagtttttcc
caatatccttccaattatagtggaaatgtctcacaagggtcaggcatctgctctgtgcct
cagcaacagcacaggtcaagtgactgcagctttatgtatggcactaaagcaccccctgtt
tcttccactcaacggcagttaagttttgcaaattatcagacttctgccaagcgtcactat
agtggatatcctgggcctgctcatccttcaatgcagcagagtgaatctgctggtccagca
tcaccaagtggaagttatatgtcaatatcaaagacaagccccttctcctcatcctcatcc
cctcctgaaagttgtagacaataccagtcctctgcacagtggggctataggcaaggggga
ccagtttggggtggagatggatttggttctcatcagttccatggctattctgagtatgga
gttggcgggacagagtccaaagacatcctggacatatcaaattacacacctcagaaagca
aagcagcgtccctgccctgacacactctctgagtcctcctcggactcctcacacacaggg
ctgggtagcatgggggggcagtattgccctagggatattccagtgcctgaagggcagtct
agcctatcaagcttagaaaagctaatgctagattggaatgaaaattctgcgggcccttca
tacaactggagtcagaacgttttgtttcaaggtgggactaaatcaggccgtggtcgcaga
aagagatcagaacaacagaatgagagggagtcatgctctatgcctccaggatcacctgca
agtccttctatgcagggagctggaccaaagcgcagtgcttcggcaggccgacaacccagg
gggagcaggggcaggggaggattctctccctgccaaagagagagatctgtaccagccaaa
gccaaacctcaaaaacctacgtccacagccacagcagggcagatgacttcagcagggtca
ctataccaagagactatagattattacagtggagacagcagtagcctatcacctcttagt
catgccccagagccctgtgaatatccctccccctactctgctcacacctcaactccctct
tctgaagaaagatttgcccagatttaccccacagattctgcctctctttccccgaatctg
tcaacccaaccagatgtcataaaacagtaccctaagacaggccctcaatcgcagtcatat
ggacatgctgccaggacattcagtcctacactatccccaagccctcgcctcctaccacag
tgtggatctgcaatgagtccacaccgggtatctacaaaggaccagtttccacagtatgat
tccccgagttacagtggctccccttgctggtatggacagagtgggagtgttactaacagc
ccccacagctatgaggagcagcgatccactgccgtcgctctgccctcccacaaacgggac
acatcactaatgggacctggaataagggtgccatcccagtctccttatccccaacctgta
aacagaggccctgcaatgtcctcatcgtgtgccagtggggcactggactcttctcctcag
catgaggagctgggttatcatggtaatatggacagctatgcaccccttcggcaacgttat
gtgtcccaaagtgcccaaagtggggttctctgccagctactggaccagcccagcgatgaa
ggctttactgtcaccagcctgtag
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