Astyanax mexicanus (Mexican tetra): 103038583
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Entry
103038583 CDS
T05042
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A-like isoform X2
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
103038583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
amex04050
]
103038583
04090 CD molecules [BR:
amex04090
]
103038583
Cytokine receptors [BR:
amex04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
103038583
CD molecules [BR:
amex04090
]
Proteins
103038583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TMEM132D_C
Motif
Other DBs
NCBI-GeneID:
103038583
NCBI-ProteinID:
XP_007253599
Ensembl:
ENSAMXG00000001061
UniProt:
A0A8B9LYW3
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Position
3:26103933..26128563
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AA seq
580 aa
AA seq
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MRVHFSTSWIFRGWITCLIFALCIQRKDAKPTCNQTQYLKDNKCCNKCGPGSFLITECSG
NADTICRQCGKNEYQSEYTTDKRCIPQKFCDDGKGFYRPTPSSTTELEPCRCKDGFQCHP
LNCEFCEPIPSCPAGQGLNEVNGKKFCKECRYGYFSDSNVAEPCKMWTNCKSIGKTEEKP
GSTKKDVTCGPPFEIQPVPPTSWAVVAVPCVIIVIFVIILSCYKDKLNILSVNLRTCIQN
IKRSRIQQETLAPPYHSNVLQSGSEITSRLIKQDDSPPEYLSLCSELKPTGNGALDPKED
QEPDSVDSVRDRADGLSSGSSDVSEGGPASPLSGSSCSCLPSMKQPMEVGENEDCSQLVA
TGLAGCCSCGMGETMEAKDSTVDAAVSLKEPPMCGNCYSDSMPGCLQGSQELYLDYSSPV
GKETMSEVGGYHSDGSLYKHNEPRCCSIESTVPPKSAFSNSNNGGLSLFADDNLLDPETD
LEIQSQCSDAALACGQVTGNNNTTFISTGQVMNFTGDVIMVYVSQTSLGSGCGGDEPYAN
PVQEESSEIHNASKSNTHTQQHDFPVQEMTTRRLQQNISV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcacttctccacaagctggattttcagaggatggatcacttgtctgatcttc
gccttgtgtatccaaagaaaagatgccaaaccaacctgtaaccaaacccagtacctgaag
gacaataagtgctgcaacaaatgtggaccaggatcgttcttgattacagagtgctctgga
aatgcagacactatttgccgccagtgtggaaagaacgagtaccagtcggaatacactact
gacaaaaggtgcattccacagaagttctgtgatgacgggaaagggttttatcgccccact
cccagtagcaccactgagcttgagccatgtcggtgcaaagatggctttcagtgtcacccg
ctgaactgtgagttctgtgaaccgatcccatcatgccctgcaggccaaggacttaatgaa
gtgaatggcaaaaagttctgtaaggagtgccgttatggatatttctctgattcaaacgtg
gcagaaccctgcaagatgtggacaaactgtaaatccattggcaagaccgaggaaaagcct
ggcagcactaaaaaagatgtgacatgtggaccgcccttcgaaattcagccggtgccccct
acctcctgggccgtggtggcagtcccctgcgtgataatcgtgatatttgtcatcattctc
tcctgctataaggacaagttgaacatcctctcagtcaatctgcgaacctgcatccagaac
attaaacgcagccgaattcaacaagagacactagcacctccgtaccacagcaatgtgtta
cagagcggctctgagatcacctcacgccttatcaagcaagacgacagtcctccagaatac
ctaagcttgtgttcggaactgaagccaactggtaacggtgctttagaccccaaggaggac
caagagcccgactctgttgattcagttcgagacagagcagacgggttatcaagcggctcc
agtgatgtttctgagggaggtccagcttctccgctttctggcagctcatgcagctgctta
ccgtccatgaagcagccgatggaagttggggaaaatgaagactgcagtcagctagtggcc
acgggcctggccggctgctgctcctgcggcatgggggagactatggaagccaaagattcc
accgtggatgctgccgtgtccctgaaggagccgccgatgtgtgggaactgctactctgac
agcatgcctggatgcctgcaaggctctcaggaactctatctggactacagcagcccagtg
gggaaagagaccatgtcagaggtcgggggttatcacagtgatggcagtttgtacaagcac
aacgagccacgctgttgtagcatagagtccactgttccccccaagtcagcgtttagtaac
agcaacaatggaggcctctctctgttcgcagacgacaacttgttggacccagaaacagac
ctggagatccagagccagtgctctgatgctgcccttgcctgtggtcaggtcacaggaaat
aacaacaccacctttatctccaccggacaggtgatgaattttactggtgacgtcatcatg
gtgtacgtcagccagacgtctctgggcagcggctgcggaggtgacgagccctacgcaaat
ccggttcaggaagaatcaagtgaaatccataatgcgtccaaatccaacacacacactcaa
cagcacgatttccctgtgcaggagatgactacccggcgcctccagcagaacatctctgtc
tga
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