KEGG   Astyanax mexicanus (Mexican tetra): 103041643
Entry
103041643         CDS       T05042                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    103041643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103041643
Enzymes [BR:amex01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103041643
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103041643
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 103041643
NCBI-ProteinID: XP_022531068
Ensembl: ENSAMXG00000013400
LinkDB
Position
13:8419098..8502565
AA seq 1037 aa
MTSHGHSDSQMEQPVELLKPSAFDHIPTVDLSSALPLRVPPAAIPMDLRVDQSPGSGSGL
VSDSVDSSLQDQQLQQELLSLKHKQQVQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQD
LLALQHQQELLEHHRKMEKHRVEQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQE
FVLNKKKALAQRNLNHCITNNPRYWYGKTQHSSLDQSSPPQTGVSAYNHPAVGVYDSKDF
PLRKTASEPNLKVRSRLKQKVTERRSSPLLRRRDNPISTAKKRSLDMADSACSSAPGSGP
SSPNNSSHSNLCENGISVAVSSSSAESSVTNRLAGREGSMSQLSLYTSPSLPNITLGLPA
TTTDNVTSTQQDSERLLVTNLPITTQFLATSHLPSYLGTSDSATSHNALLQHMVLLEQSA
TPSPLATGISALPLQSPALHKLRQHRPLGRTQSAPLPQSNQALQQLVVQQQHQQFLEKHK
QQFQQLHINKILTKPGEVGRQHQSHPEETEEELREQQDSALLEEGLPLSVIIKQEPPDPQ
EEERQEEQELLFRQQALLLEQQRIHQLRNYQASMEAAGLSVSFPGHRPLSRAQSSPASAS
FITVQDPPSKPRFTTGLVYDSLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQETGLRGQCE
CIRGRKATLEELQTVHSEAHVMLYGTNPLRQKLDSSVISMFVRLPCGGIGVDSDTIWNEV
HSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLL
QQRLNVSKILIVDWDVHHGNGTQQAFYDDPNVLYISLHRYDDGNFFPGSGAPDEVGSGPG
VGFNVNMAFTGGLDPPMGDAEYLSAFRTVVMPIANEFAPDVVLVSAGFDAVEGHPPPLGG
YKVTSKCFGYLTKQLMGLAGGRVVLALEGGHDLRAICDASEVCVSALLGKELDPLCPDLL
KQRPNANAVSSMEKVLETQSKYWRSVQRYVSSVGYSLLEAQRCDSEENETVSAMASLSVA
TMEKRTEDEPMEEEPPL
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgacctctcatggtcactcagattcgcagatggagcagcctgtggagcttctgaagccg
tcagcctttgaccacattcccacagttgacctgagctccgctctgcctctcagagttcct
ccagcagccattcctatggacctgcgggtggaccagtctccaggttcgggctcgggtctg
gtatcagactcggtggactccagcctgcaggaccagcagctgcagcaggagctcctgtcc
ctgaaacacaagcagcaggtccagagacagctcctcatcgccgagttccagcggcagcac
gagcagctctcccgccagcatgaagcccagctgcaggagcacatcaagcatcagcaggac
ttactggctcttcagcaccagcaggagctgctggagcaccacaggaagatggagaagcac
cgggtggagcaggagctggagaaacagcagcgggagcagaaactacagctcctcaagaac
aaggagaggggtcaggagagtgccgtggccagtacagaggtgaagatgaggctgcaggag
tttgtgctgaataagaagaaagctttggcccagcgcaacctcaaccactgcatcaccaac
aaccctcgctactggtacgggaaaactcagcacagttctctagaccagagctccccccct
cagactggagtctctgcctacaaccacccggctgtgggcgtctacgactccaaggacttc
ccactccgcaagacagcatcggaacccaacctgaaggttcgctctcgtctgaagcagaag
gtcacagagaggcggagcagtcctctactgcggcggagagacaaccccatcagcaccgcc
aagaagcgctctctggacatggcagattctgcatgtagcagtgctccaggatccggcccc
agctcccccaacaacagctcacacagcaacctgtgtgagaacggcatcagcgtggccgtc
tccagcagctctgcagagtcgtctgtaactaacaggcttgctggacgggaaggctcgatg
agtcagctgtctctgtacacctctccctcgctacccaacatcactctgggcctgccggcc
accaccaccgataatgtgacgtctacccagcaggacagtgagcgcctgcttgtgaccaat
ttacccataaccacccagttcctggccacgtctcacctgccttcttacctgggcacatct
gactcagccacttcccacaatgccctgctgcagcacatggtcctgctggagcagtcagcc
acgccgagtcctttagctacaggcatcagcgccctccctctgcagtctcctgccctccac
aagctgaggcagcaccggcctctgggtcgcacccagtccgcccccctgccccagagcaac
caggccctgcagcagctggtggtccagcagcagcaccagcagttcctggagaaacacaag
cagcagttccagcagctccacatcaacaagatcctgacgaagcctggtgaggtggggcga
cagcatcaaagccaccctgaagagacggaggaggagctcagggagcaacaggactccgcc
ctgttggaggaggggctaccgctcagtgtcatcattaaacaggaacccccggacccccag
gaggaggagagacaggaagagcaggagctgctcttcagacagcaggccctcctgctggag
cagcagaggattcatcagttgaggaactatcaggcctccatggaggcggcgggtctgtcg
gtcagtttccccgggcaccgccccctgtcccgggctcagtcctctcctgcatccgcctcc
ttcatcactgtgcaggacccgccctccaaacctcgcttcactacaggtcttgtgtacgac
tctctgatgcagaagcatcagtgcatgtgtgggaacaccaacacacacccggagcacgcc
ggccgcatccagagcatctggtcccggctgcaggagacgggtttacgaggacagtgtgaa
tgtattcgggggaggaaggcgactctagaggagctgcagacggttcactcagaggctcat
gtcatgctgtacggcaccaaccctctgcgccagaaactcgacagttctgtaatttccatg
ttcgtcaggttgccgtgtggtgggatcggggtggacagtgataccatctggaatgaggtg
cactcctccagtgcagctcgtctggctgtgggctctgtggttgagctggtttttaaagtt
gcttcaggagaactgaagaacggctttgctgtggtgagaccacccggacaccacgctgag
gagagcactcctatgggcttctgctactttaactcggttgccatagcagctaaactttta
caacaaaggctcaatgtcagtaaaatcctgattgtcgactgggatgtgcaccacggcaat
ggcactcagcaggctttctatgacgaccccaatgttctgtacatctctctccatcgctac
gatgatggaaacttcttccctggaagtggagctcctgatgaggtggggagtggtccaggt
gtgggctttaatgtgaacatggccttcactggggggctggatccaccaatgggggacgct
gaatacctgtctgctttcaggacggtggtgatgcccattgcgaatgagtttgctccagat
gttgttctggtgtctgcaggctttgatgctgtggagggacacccgcctccactgggagga
tacaaagtcacgtccaaatgttttggttacctcacaaagcagctgatgggattggctgga
ggacgggtggtgctggcgctggagggaggtcatgatctcagagctatatgtgatgcttca
gaggtctgtgtatctgctctgctggggaaagagctggacccgctctgcccagacctgcta
aagcagagacccaacgctaacgctgtgagctctatggagaaagttctagaaactcagagt
aagtactggaggtcagttcagaggtacgtctcctcggtgggctactctctgctggaggct
cagcgctgtgactcagaggagaacgagaccgtcagcgccatggcgtctctatctgtggca
acaatggagaaaaggactgaagacgagccgatggaggaagagccgccgctgtaa

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