Astyanax mexicanus (Mexican tetra): 103042004
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Entry
103042004 CDS
T05042
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103042004
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103042004
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Cortex-I_coil
DALR_1
Motif
Other DBs
NCBI-GeneID:
103042004
NCBI-ProteinID:
XP_022536857
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Position
20:16565749..16654846
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AA seq
630 aa
AA seq
DB search
MGSPLRLRPELCYHHHHHQHHHPQQQQQHHRHGYRGSSQASASPSEHAPSSHASCSRLHP
PPPLPPPPLPPPLHPPPPPPLPPAAAAEMSGCGRYNGGVMRRSLHEFDSESQPLRPACAA
SACASDAAPYPDVSVSSSKPDGGGGGGGGGGGGGGGGSSGQRGSKSGKKKNQNIGQKLGH
RRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYGKESLYSLALKCLISLSTIILLG
LIIIYHAREIQLFMVDNAADDWRIAMTYERIFFICLEILVCAIHPIPGKYTFTWTARLAF
YYTSSKTDADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMK
TLMTICPGTVLLVFTISLWIIAAWTVRACERYHDNQDVTSNFLGAMWLISITFLTIGYGD
MVPNTYCGKGVCLLTGIMGAGCTALVVAVVAKKLELTKAEKHVHNFMMDTQLTKRVKNTA
ANVLRETWLIYKNTKLVRKMDHARVRKHQRKFLQAIHQARKLRSVKMEQRKLNDQANSLV
DLAKTQNIMYDLISDLNERGEDTEKRIAVLETKLETLLSNLQALPGLISQLISQQHRDFL
EVQLQPYERSQSVSRRRSSSTAPPTSSESS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcccactgcggctgcggccggagctctgctaccatcatcatcatcatcagcat
catcatcctcagcagcagcagcagcatcacaggcacgggtaccggggcagcagccaggcg
agcgcgagcccgagcgagcacgcgccctccagccatgcgagctgctcgagactccatcca
cctcctcctcttcctccacctcctcttcctccaccgctccaccctcctcctcctcctcct
ctccctcccgctgccgctgcggagatgagcggctgcggccggtacaacggcggcgtgatg
cgccgcagcctgcacgagttcgactccgagtcgcagccgctgaggcccgcgtgcgccgcg
tccgcctgcgccagcgacgccgcgccgtacccggacgtgtccgtgtcgtcctcgaagccc
gacggcggcgggggaggcggcggaggcggcggagggggaggcggcggcggatcgtccggc
cagagaggctccaaatccggcaagaagaagaaccagaacatcgggcagaagctcggccac
cggagggcgctgttcgagaagcgcaaacgcctcagcgactacgcgctcatcttcggcatg
ttcggtatcgtggtgatggtcatagagaccgagctgtcctggggggcttacggaaaggag
tccctgtattcgttagcgctaaaatgcctgataagcctttctacaatcatccttctgggt
ttgatcatcatttatcacgccagagagattcagctgttcatggtggacaacgcggcggac
gactggaggatagccatgacctacgagcggatcttcttcatctgcctggagatcctggtg
tgtgccatccaccccatcccgggcaagtacaccttcacctggacggcgcgcctggccttc
tactacacctcctccaagacggacgcggacgtggacattatcctgtccatccccatgttc
ctacggctgtacctgatcgcccgcgtcatgctgctgcacagcaaactgttcacggacgct
tcctcacgcagcatcggcgcactcaacaagatcaacttcaacacgcgcttcgtcatgaag
acgctcatgaccatctgccccggcaccgtgctgctggtcttcaccatttctctgtggatc
atcgccgcctggactgtgagggcgtgcgaaaggtaccacgataaccaagacgtaaccagc
aacttcttaggagccatgtggttgatctcaatcacttttctaaccattggatacggggac
atggtccccaacacgtactgtggcaaaggggtgtgtctcctcaccgggattatgggcgcc
gggtgcactgctttggtggtggccgtggtggcgaaaaaactggaattaaccaaagctgaa
aaacatgtacataacttcatgatggacacgcagctgaccaaaagagtgaaaaacacggct
gctaacgttctcagggagacctggctcatctacaagaacaccaagctggtgaggaagatg
gaccacgccagggtcaggaagcaccagaggaaattcctccaagccattcaccaagctcga
aaattaagaagtgtaaaaatggagcaacggaagctgaatgaccaagcaaactctctagtg
gacctcgctaagactcagaacatcatgtacgacctgatctcggacctgaacgagcgcggc
gaggacacggagaagaggatcgcggttctggagaccaagctggagacgctgctgagcaac
ctgcaggctctgccgggcctcatcagccagctgatcagccagcagcaccgcgacttcctg
gaggtgcagctgcagccgtacgagcgctcgcagtcggtgtctcgtcgacggtcgtcctcc
accgccccgcccacttcctcggagagcagctag
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