Astyanax mexicanus (Mexican tetra): 103042409
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Entry
103042409 CDS
T05042
Symbol
nr1d1
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103042409 (nr1d1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103042409 (nr1d1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103042409 (nr1d1)
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1D. Rev-Erb
103042409 (nr1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103042409
NCBI-ProteinID:
XP_007232288
Ensembl:
ENSAMXG00000015855
UniProt:
A0A8B9RJG0
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MTVLEDKMTTTMDTNNTGGVISYIGSCGGSPNRTSPVSMYSENSNSSSQSLTQQFFGSSF
PPSPNGSQDSSRMYTSSSSSSSSSGSGEDGNSSCSGGSPRGRDEGTNARNSPNKSVAALT
KLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCTIMRINRN
RCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNNMVNNQLQSEFQMASLKS
VTPSSTSPSSSSPCPGLTVAPKPQPPAVPIPPSPSPPAPASPPAQPAQSPPLIATSPPLC
HSPGVDSTIMAITRAHRETFVYAHDKLGPVPRPQNNVDISDQIGNRCSAGYHINGHNTTR
HNNNITPHHNGFEMASDNGHHFQSSPVSSQQHHGLPHQNIGRRLLNNNSYGVHQSQETSN
NVQSQNCPWKNRKEILLACPMNMHPQADPNKTPQEIWEDFSLSFTPAVREVVEFAKHIPG
FSSLSQNDQVTLLKAGTFEVLMVRFASLFNVKEKTVTFISGTTYSLEALKNMGMGDLLGT
MFDFSEKLNALELSPEELGLFTAVVLVSADCSGIENINSVEMLQESLIRALRALVSKSAP
ADASRFTKLLLKLPDLRTLNNMHSEKLLSFRID
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgctagaggacaaaatgacgaccacgatggacacgaacaacacagggggcgta
atctcatacatcggctcatgcggaggctccccgaaccgcaccagcccggtgtccatgtac
agtgagaattccaacagcagttcacagtccttgacccagcaattcttcggctcatccttc
ccgccttcacccaacggctcccaagattcctcccgcatgtacaccagcagtagcagcagc
agcagcagttctggctctggtgaggatgggaactcctcctgctctggtggatccccaagg
ggtcgtgatgaaggcaccaacgcacgcaattcacccaacaaatcagttgcggctcttaca
aagctcaatgggatggtgctgctctgtaaagtctgcggagatgtagcttcaggtttccat
tatggcgtccatgcttgtgaaggttgcaaggggttcttccgtcggagcatccagcaaaac
atccagtacaaaaagtgcctgaagaatgagacttgcactattatgaggatcaaccgcaac
cgctgtcagcagtgtcgtttcaagaaatgcttgtccgtgggcatgtctcgggatgctgtc
cgttttggacgcatcccaaagcgtgaaaagcagcgcatgctggctgagatgcagagtgcc
atgaataacatggtgaacaatcagctgcagagtgaattccagatggctagtctcaaatcc
gtgaccccgtcctctacgtcaccttcttcctcatcgccctgtccaggtctgaccgtggcc
cctaagcctcagcctcctgctgtgcccatacctccttccccctccccaccggctcctgcc
tcccctccggctcagccggctcagagccctcctctgatcgccacttcccctccactgtgc
cacagccctggcgtggacagtaccatcatggctatcacccgagcccaccgcgagaccttt
gtctacgctcacgataagctaggccctgtaccacggccccaaaataatgtcgatatcagt
gaccaaattggcaatcgctgttcagctggctaccacatcaatggccacaatacaacccgt
cacaataataacattacccctcaccacaatggctttgaaatggcatctgataatggacat
cacttccaatcctcaccagtctccagtcagcagcatcacgggttgccacaccaaaacatt
gggcgacgccttctcaacaacaactcgtacggggttcatcagagtcaagagaccagcaac
aatgtccagtcacaaaactgcccgtggaaaaaccgcaaggagattcttttggcttgccca
atgaatatgcatcctcaggcagaccctaacaagacaccacaggagatttgggaagacttc
tcactaagcttcacaccagctgtgcgtgaagtggtagagttcgccaaacacatccctggt
ttcagctccctgtcccaaaatgatcaggtcacgctgctgaaggctggaacctttgaggtg
ctgatggtgcgtttcgcctctctgtttaatgttaaggagaagactgtaacgtttatctct
ggcaccacctacagcctagaagctctgaagaacatgggcatgggagatctgttgggaacc
atgtttgacttcagtgagaaactcaatgctcttgagctctctccagaggagctgggactc
ttcactgctgtagtactggtatctgcagattgctctggcattgagaacatcaactcagtg
gagatgctccaggagagcctgatccgagccctccgtgcactggtcagcaagagtgctcct
gctgatgcttcacgtttcaccaagctgctgctcaaactgccagacctccgcaccctcaac
aacatgcactctgagaagcttctgtccttccgcattgactga
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