Astyanax mexicanus (Mexican tetra): 103043767
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Entry
103043767 CDS
T05042
Symbol
shox2
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103043767 (shox2)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
103043767 (shox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
DUF4131
7tm_3
Motif
Other DBs
NCBI-GeneID:
103043767
NCBI-ProteinID:
XP_007258448
Ensembl:
ENSAMXG00000013381
LinkDB
All DBs
Position
17:complement(5675439..5687858)
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AA seq
380 aa
AA seq
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MRRERTGGGVSPPSSPLPLLLFLLLLLLLSLFLTLLLHHQPHHHHHNYNHHQPTSFSSFF
FFLLSLSSGAPGMEELTAFVSKSFDQKVKEKKEAITYREVLEAAGSARPRDALATDAAAR
EDAVAGARGGTGGPGGGGARSPLRDTDMAGPDRREAGSPKLTDGTTDLKERREETKATED
ETQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR
AKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHSNLPPFSFQVQAQLQ
LDSAVAHAAHHHLHSHLAAHAPYMMFPAPPFGLPLATLAAESASAASVAAAAAAAKNSNK
NSSIADLRLKAKKHAAALGL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggagaggactggtggtggtgtttctcccccctcctcccctcttcctctcctc
ctctttcttcttctccttcttcttctctctctatttctcactctacttcttcatcatcaa
cctcaccatcatcatcacaactacaaccaccaccaaccaacctccttctcctccttcttc
ttcttcctcctctccctctcttcgggcgcaccggggatggaagaactgaccgcttttgtg
tccaaatcttttgatcagaaagtgaaggaaaagaaggaggccatcacctaccgggaggtg
ctcgaggccgccggttcggcgcgcccgagggacgctctggccactgacgcggcggcgcgc
gaggacgccgttgcgggagctcgaggaggaacaggaggtccgggaggaggaggcgctcga
tcgccgctgcgggacacggacatggcagggccggataggagagaggcgggcagcccgaaa
ctgacggacggtaccacggacctgaaggagcgcagggaggagacgaaggcgaccgaggac
gagacgcaaacgaagatcaaacagcggcgcagtcgcacgaacttcacgctcgagcagctc
aacgagctcgagcgcctgttcgacgagacgcactatccggacgcctttatgcgcgaggag
ctcagccagaggctcggtctgtcagaggcgcgcgtgcaggtttggttccagaatcggaga
gcgaagtgcagaaaacaggaaaatcagcttcataaaggggtgcttataggagctgcaagt
cagttcgaagcatgtcgtgtcgcaccatatgtcaacgtgggagctctgcgtatgccgttc
caacaggatagtcatagcaacctgccgcccttctcctttcaggtgcaggcgcagttgcag
ctggacagcgccgtggcgcacgcggcgcaccaccacctgcactcacacctggcggcgcac
gcaccctacatgatgttcccggcgccgcccttcggcctcccgctggccacactggccgcg
gaatcagcctcagcagcgtccgtggcggcggcagcggcggcggccaagaacagcaacaag
aactccagcatcgcggacctgcgccttaaggccaagaaacacgcggctgcgctcggcctg
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