Astyanax mexicanus (Mexican tetra): 103043866
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Entry
103043866 CDS
T05042
Symbol
blm
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103043866 (blm)
03460 Fanconi anemia pathway
103043866 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103043866 (blm)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103043866 (blm)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103043866 (blm)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103043866 (blm)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103043866 (blm)
Bloom's syndrome complex (BTR)
103043866 (blm)
FA (Fanconi anemia) pathway
103043866 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
BDHCT_assoc
Syntaxin
Motif
Other DBs
NCBI-GeneID:
103043866
NCBI-ProteinID:
XP_007235739
Ensembl:
ENSAMXG00000016970
UniProt:
A0A8T2LVC0
LinkDB
All DBs
Position
18:25845616..25864023
Genome browser
AA seq
1447 aa
AA seq
DB search
MFSLPQNNLKEQLERHSKVSAAQNKLSLAKPKPGAFCFRKTSTSTTSKAAVPEKVIGSNV
FVNQSGNVPRSCEVTKPPLTFPKKPERAPPKFNFFSAPSKPKTQSINPSANPFAVTKPTL
IQSVIKTSAKSETIPPDTHEDKSAESLVGNDSFAIPVDDWDDLDDFETPSKVRASQSPQI
PVKKTSGLDKNVSPKAASAKSADTTENGSLPVGPSFGACGEALEIPTDTSGADRHDAISA
GEPDDSPIKLTKRRLSAVKQKPLLSDSEDESITDNIKPHNKADENFKYSEENEQKCKSPK
IIDIDDSQEEDVLEDDFDFIPPSPIPEDQSPSVPTLEKRKPDLIKNEVASVASSRCSVSS
LSGQKVPAKDLKGPDDALFSIMESICCLVDKIPEHELIALTCGTELLLQRAHRKRILAEI
ASSGKSVSVSGAACDFRLLHRGSFGVPTPLISGKGDSALKGFQYRKSFASTMSVDYNNSV
FEDSDCIINGVETPGGSWNPNPSLKSAAKGDQENTCLKKNNVHIESSSLLLKQTDDQTED
LLQTNLFFSPKKRVGTIKKNKEDKVENNTAGSVYFDSEMDTVPDDFYDDDFDIDDFNESD
IPKYNEEPVDSLATKKSSSATPKPIYEGGPSKSCEKRTVTTPTAVVKPTKPASPEVTYRN
PAHDRFRGFSFPHSSEMMKIFHKRFGLHQFRFNQLEAINATLLGEDTFVLMPTGGGKSLC
YQLPACVSAGVTVVISPLRSLIVDQVQKLTTLDIPATSLSGDKSESEAGRIYMQLSKKDP
VIKLLYATPEKVSASGRMISALQNLYERNLLARFVIDEAHCVSQWGHDFRPDYKRLHELR
QKFPNVPIMALTATATPRVQKDILNQMAMNRPQVFTMSFNRHNLKYSVLPKKPKKVDEEC
INWIKKYYPRDSGIIYCLSRNDCDTMADSLQRAGIAALAYHAGLNDKDREYVQNKWINQD
RCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYSYSDV
IRIKRILAMDKDGNHHSRATHTNNLHSMVHFCENVSECRRIQLLAYFGENKFNADFCKEH
PEVICDNCARPHQYKARNVTEDVKKIVRFVQENCQKVGGRYSKSSQQNRLTLNMLVDIFI
GAKSARIQTGMFGHGAAYSRHNADRLFKKLVLDNVLMEDLYITNNGQAVAYISAGQKAMN
VLNGSMQVVFHETESASSIRKHKASVIKNVSKREEMVTKCLEELNELCKKLGKVFGLHYY
NIFSTSTLKTIAETLSADPEVLLQIDGVTEDKLDKYGAELIELLQKYTEWQLPVEEQVES
SGWIDTARDHLEDDVYDDEEDSSSSYFRSSTGRGEKRKKTPYSRKPKRRKSYNNQNTYKS
GNSGGWSSSKGGYKAAGRGAGRGAGRGSARPAAAAAAPAARRPGVMALPTPQTAARPFLK
PAFSHLG
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctccctcaaaacaatttaaaagagcagctggagcggcacagtaaagtcagc
gccgcccagaacaagctctctctggccaaacctaaacccggggcgttttgcttcagaaag
acatctacatcaacgactagcaaagctgcagtccctgagaaggtaattggttctaatgtc
tttgtaaaccagagtggcaatgttcctcgcagctgtgaagtaactaaacctcctctgaca
tttccaaagaagcctgaaagagcccctccaaaattcaacttcttcagtgcacccagcaaa
cccaagacacagtccatcaacccatcagccaacccatttgcagtgactaaacctactctg
atccagtctgtcatcaagacttcagccaaatcagaaaccatcccccctgatactcatgaa
gataaaagtgcagaatcactggtgggtaatgactcttttgctattcctgtggatgactgg
gatgaccttgatgattttgaaacgccttctaaagtaagagcatcacaaagcccccagatt
ccagtgaaaaaaacatctggattagataaaaacgtatcgcctaaagctgctagtgctaaa
agtgctgacacaacagagaatggaagtttgcctgttggaccatcatttggtgcttgtgga
gaagctttggaaattccaacagacacctctggtgctgatcgacatgatgccatctctgct
ggggagccagatgattctcccatcaaactaaccaagcgtcgactatctgcggttaagcaa
aagccactgctcagtgacagtgaggacgagagcatcactgacaatattaaacctcataat
aaagctgatgagaacttcaagtattcagaagaaaatgaacaaaaatgcaagagtccaaaa
atcatagacatagatgacagtcaggaagaggatgtacttgaggatgactttgattttatt
ccaccgtcacccattccagaagaccagagtccatctgttccaactttggagaaaagaaaa
cctgaccttataaaaaatgaggtggcaagtgttgcttcttcgagatgttctgtctcaagc
ctttcagggcaaaaggttcctgctaaagatttaaaagggcctgatgatgctctcttcagt
atcatggagtctatctgttgtctagtggacaaaatcccagagcatgagctcatagccctg
acttgtggcacagagctgcttttacaaagagctcacaggaaaaggattcttgctgagatt
gcatcatcaggaaagtcagtgtcagtcagcggagccgcttgtgatttcagattgctgcac
agaggaagttttggtgttcctacccctttgatctcaggcaaaggagacagtgcactaaaa
ggctttcagtatagaaagtcctttgcatctacaatgtctgtagattacaacaacagtgtg
tttgaagactctgattgcattattaatggtgtggagacaccaggtggctcttggaacccc
aacccttccctcaaatcagctgcaaaaggagaccaggaaaacacatgtctgaaaaaaaat
aatgtccacattgagtcatcaagtttgcttttaaaacagacagatgatcagactgaagat
ctactacagaccaacctattcttctctcccaagaagcgagtggggaccataaaaaagaat
aaggaagataaagttgagaacaacactgcagggtctgtgtattttgattcagaaatggac
actgtgccagatgacttctacgatgatgactttgacattgacgacttcaatgagagcgat
attccaaaatacaatgaagaacctgtggattcattagctacaaagaaaagttcaagtgca
accccaaagccaatttatgaaggaggaccctctaagtcctgtgagaaaaggactgtcacc
acacccacggctgttgtaaaacctactaagccagcctcccctgaggttacatatagaaat
ccagcacatgaccgctttaggggcttcagctttcctcactcttcagagatgatgaagatc
ttccacaagagatttggtcttcatcagttccgtttcaatcagcttgaagccatcaatgct
acgttgctgggagaggacacgtttgttttaatgcctacaggagggggcaaaagcctctgc
taccagcttcctgcctgtgtgtctgctggagtgactgtggtgatatcccctctacgttct
ctgattgtggaccaggtccagaaacttaccacattggatatccctgcgactagcttatct
ggggataaaagtgagagtgaagctggacgaatctacatgcagctctctaagaaagatcct
gtcatcaaactgctttatgccactcccgaaaaggtatctgcaagtgggaggatgataagt
gccctgcaaaacctgtatgagagaaatctgcttgctcgttttgtcattgatgaagcccac
tgcgtcagccagtggggacatgacttcaggccagactataagcggttacatgagttacgg
caaaagtttcccaatgttcctataatggcactgacagcgactgccacacctcgggtgcag
aaggatatcctcaatcagatggccatgaatcggcctcaagtattcacaatgagcttcaac
agacacaaccttaaatattctgttctgcctaaaaaacccaagaaggtagatgaggagtgc
attaactggatcaagaaatattatccacgtgactctgggattatctactgcttgtcaagg
aatgactgtgataccatggctgatagtcttcagagagctggaattgcagcactggcttac
cacgcagggctaaatgacaaagacagagaatatgttcaaaacaaatggatcaaccaggat
agatgccaagtcatgtgtgccacaattgcttttggcatgggcattgacaagcctgatgtg
cgctatgtgatccatgccagtctgcccaagtcagtggagggctactaccaggaatcgggg
agagcaggccgagacggagagatttcccactgtgttctcttttattcttacagtgatgtt
attcgcatcaaaagaattcttgccatggataaggatggcaatcatcattctagagccacc
cacacgaacaaccttcacagcatggtgcatttctgtgagaatgtgtcagagtgtcgaagg
atccagctgcttgcttactttggcgagaacaaattcaatgctgacttctgtaaagagcat
cccgaagtcatttgtgacaactgtgccagaccacaccaatacaaagccagaaatgtgact
gaggatgtgaagaagattgtgaggtttgtacaagaaaactgtcagaaagttggtggcaga
tacagcaaatcttcacagcaaaacagactcactctgaacatgttggtggacattttcata
ggtgctaaaagtgcccggatccagacgggcatgttcgggcacggagcagcctactccaga
cacaacgcagacaggctctttaagaagcttgtgctggacaatgttctgatggaggacttg
tacattaccaataatggccaggctgtggcctacatctctgctggccaaaaagccatgaat
gttctaaatggcagcatgcaggtggtatttcatgagactgaaagtgcatccagcatcagg
aaacacaaagcctctgtgatcaagaatgtttctaagagggaggaaatggtcacaaagtgc
ctggaagagctcaatgagttgtgtaagaagttgggcaaagtttttggtcttcactactac
aacatcttctccacaagcaccttgaaaacgattgctgagactctatctgctgaccctgag
gtgctgctacagattgatggcgtgactgaggacaagctggacaaatacggagctgagctt
atcgaactgctgcagaaatacactgaatggcagctgcctgttgaggagcaggttgaaagc
tcagggtggatcgacactgcacgagaccacctagaggatgatgtgtatgatgatgaagag
gacagctcgtcatcttatttcaggagcagcacaggtcgaggagagaagaggaagaaaacg
ccctattcaaggaaacccaaaagacggaagagttacaacaaccaaaacacctataaaagt
gggaacagtgggggctggtcttcatctaaaggtggatataaagctgctggtcgaggtgca
ggtcgaggagcgggtcgaggctccgccaggcctgctgctgctgctgcagctccagcagca
agaagaccaggcgtcatggctctgcctacaccccagactgctgcacggccattccttaaa
cctgccttctctcatctcggctaa
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integrated database retrieval system
