Astyanax mexicanus (Mexican tetra): 103045633
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Entry
103045633 CDS
T05042
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103045633
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRRNT
ig
LRR_9
V-set
Ig_2
PRIMA1
Ig_6
Insulin_TMD
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
103045633
NCBI-ProteinID:
XP_007245082
UniProt:
A0A8B9K7K9
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Position
7:15422001..15426787
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AA seq
888 aa
AA seq
DB search
MSLLGRVAVRRARKTALLCVVFLMVQVCVEVAAGAAGPQGCPPVCSCSNQLSKVVCTRRG
LTRVPPGIPTNTRHLNLMENGIEAVEADSFRHLHHLEVLQLGRNAIRQIEVGAFNGLTSL
NTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLE
YISEGAFEGLVNLKYLNLGMCNIRGEMPNLNPLLALEELEISENFFPEIKPSSFKGLTSL
KKLWIMNSKIGLIERNAFDDLSSLVELNLAHNNLSSLPHELFAPLKFLVELHLHHNPWNC
GCDSLWLARWLRDYIPTNSTCCGRCHSPAHMRGRQMVEVDRGDTGAMQCSAPFIADAPRD
LNISAERVAELRCRTASMSSVRWLLPNGTILTHASSHPRITVLNDGTLNFSNVLVADTGM
YTCMVSNAAGKSNASAYLNVSAAELNTSNLSYFTTVTVEVLGPTSELPKTKTTTTTPGAS
TTTTASPSVFQPVFISTPTVLLQSTDIPPSRPPAVPASKVTTGKPPNPASTSLDEVMKTT
KIIIGCFVAVTLLAAIMLIVFYKLRKRHQQRSTVAAARTVEIIPVDEDLPPPASAASIRG
EGALTLPEIRDHNSIHKLDYITHKSDYSYHKPKMDYSTHKPKSDYSIHKPKPDFSTYKPK
SDYCIQIPKTDYITHKPKEDYNTYKPQVDYSPHKPSPDFTHRSLPDYHIKKPEQSPYKPG
YNTHKPDYKSQTVRPDFSPFKPDYSIHKPKTDYSTHKAKTNYIPHKAATNYSPFKMDCSP
FKPDYSAFKADYSPLKAEYISHKPDFSPHKSKMDYSPHKEDYSPHKLNYSTLKPKYNTYK
PGGHAAKWTESNSIGNSLPRTLPSTITTISEPFVMKTHAKEKVQETQI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctggggcgggtagctgtgcgtcgagccaggaaaaccgccctgctctgtgtc
gtcttcctcatggtgcaagtgtgcgtggaggtggcggcaggagcggcgggtccccaaggc
tgcccgcccgtctgctcctgcagtaaccagctcagcaaggtggtgtgcacccgccgcggt
ctcacccgcgtgccccctggcatccccacaaacacaaggcacctcaacctgatggagaac
ggcatcgaggcagtggaggccgactcctttcgacatctccaccacctggaggtgcttcag
ctggggcgcaatgccatccgacagatcgaggtaggagccttcaatggccttaccagcttg
aacaccctggagctcttcgataaccggctgacagtagtgcctagcggcgcttttgagtat
ctgtcaaagctgagggaactgtggctgagaaacaaccccatcgagagcataccttcttat
gccttcaaccgagtgccctctctcatgcgtctggacctaggtgagctgagaaagcttgag
tacatctctgaaggggcctttgagggtttggtcaacctcaagtacctcaacttaggcatg
tgcaacatccgaggagagatgcccaacctgaacccgctgctagcactagaggagctggag
atctcagagaacttcttccctgagatcaaacccagctctttcaaaggactgacatccctt
aaaaagctatggatcatgaactctaaaatagggctaattgaacgcaatgcattcgatgac
ctgtcctctctggtggagctaaacctagcccacaacaatctgagttctctgccccatgag
ttgtttgcccctttgaagttcttggtggaactacacctccaccacaacccttggaactgc
ggctgcgattcattgtggctagcacggtggctgcgtgactacatcccaaccaactcgacc
tgctgcggcagatgtcattctccagcacacatgagaggtcgtcagatggtggaggtggac
agaggtgacaccggtgcaatgcagtgctctgcccccttcattgcagatgccccaagagac
ctcaatatttcagcagaacgggtagcagagctgcgatgtcgaacggcgtcaatgtcgtca
gtgcggtggctcctaccaaatggcactatactgacacatgcatccagtcatccaaggata
accgtgctcaatgatggaactctaaacttttcgaacgtgcttgtggccgacacaggcatg
tacacttgcatggtgtccaacgcagcaggaaaatccaatgcttcggcttacttaaatgtg
agcgcagctgaactcaacacatccaacctcagctacttcactactgtcacagtggaagtg
ctgggaccgacatctgagctgccaaaaaccaagaccacaacaaccacaccaggtgcaagt
acaacgaccacagcttctccctctgtctttcaaccggttttcatctcaacaccaacagta
cttctccaaagcactgacataccaccaagtcggccgcctgcagtgccagcttcaaaagtt
acaacagggaaacctcccaatccagccagcaccagcctggacgaggtcatgaagacaaca
aagatcatcattggctgttttgtggcagtgacactgctagcagcaatcatgctaatagtg
ttctacaaactgaggaagcggcatcaacaaaggagcaccgtggctgcagccaggactgtg
gagatcattcctgtggatgaggacctaccaccacctgcatctgctgccagtatacgaggg
gagggagcactaacactaccagagattagggaccataacagtattcacaagttggactac
atcacccacaaatcagactacagctaccataaacccaaaatggattacagcactcacaaa
cccaagtcagattacagcatccacaaacccaaacctgactttagcacttataaaccgaaa
tcggactactgcatccagattcccaagacagactacattacacacaagccaaaagaggat
tacaacacttacaaaccacaagtggactacagccctcacaaaccatccccagacttcact
cacagatcattgcctgattatcacattaaaaagccagagcaaagtccgtacaaacctgga
tataacacccacaagcctgattacaaatctcaaacagtcagaccagacttcagccctttc
aaaccagattacagcattcacaaacccaaaacagactatagcacgcacaaagccaaaacc
aattacattccccacaaagctgccaccaactacagtcccttcaagatggattgcagtccc
ttcaaaccggactacagtgcatttaaggcagactacagcccactcaaagctgaatacatc
agccacaaaccagactttagcccccacaagtctaaaatggattacagtcctcacaaagag
gactacagcccccataagctcaactatagcaccctaaagcccaagtacaacacctacaag
cctggaggacatgcagctaaatggacagaaagcaacagcattggaaactctcttcctcga
accttgcccagtaccatcaccactatctcagagcccttcgtcatgaaaacacatgcgaag
gagaaagtacaagagactcaaatctag
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