Astyanax mexicanus (Mexican tetra): 103046095
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Entry
103046095 CDS
T05042
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin-like
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
fn3_2
Motif
Other DBs
NCBI-GeneID:
103046095
NCBI-ProteinID:
XP_022530662
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Position
12:complement(27622703..27683373)
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AA seq
2039 aa
AA seq
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MISGMLRGSVAGLLLLCAGSAVLGGPQAGRGEEQQQQVALDTAFLEATQYSGLQEGCTEN
SRFYRANEQWERPYMGSTLLCTCRGSAGVTCESKPAMEETCYDKVNMRSYRVGETYERPK
DGMIWDCTCIGSGKGKISCTIANRCHEGGRSYRIGEKWTRPHDTGDYMLECVCLGNGKGE
WTCKPVAERCYDSSVGSSYVVGQTWEKPYQGWMIVDCTCLGEGNGRITCTSRNRCNDQDT
RKSYRIGETWSKVDTNGHRLQCLCTGNGRGEWKCERHSSTHTALGPGTGMELVAQVRPVT
HQVDVVNQLVEEEGSCRVASEVIYSNGMSWVQTQGSQQRICTCVNGGIGCEDWDGQSSQV
YGGNSNGQPCVFPFVFEGKTHYSCISEGRTDGQLWCSTTSDYDSDGQYSFCTQRNLMVTT
RGGNSNGAMCKFPFIYNGRNYTDCTADGRRDGMKWCGTTTNYDDEQRFGFCPMAAHEEIC
TANDAMYRLGDQWDKRHDTMGHLMRCTCLGNGRGEWSCIAYSQLRDQCIVDGHTYEVNQN
FDKRHTEGYMMNCTCFGQGRGRWKCDAIDQCQEPESKAFYQIGEAWDKVIQGIRYRCYCH
GNGIGEQACEPLLSSVPVRVIITETGNKPNSHPIQWNPPSSAHITEYILKWRVKNTRTPW
KQAVIPGHINFYTISGLKSGLTYEGQLVSILHSGRRETTRFDFTTSHGSLIPTEGITTPP
PPVLDTSESVTEITSSSFVISWVSASDTISGFRVEYELSEEGAQPSVIDLPRTATSVNIE
NLLPXRRYNVQVFEVQPGGDTNIILHTTQTTAPDAPTDHRVTGVEETSIVISWTRPQAPI
TGYRVVYTPSEEGSSTELILPESVTTVTLVDLQPGSQYNVSIYAVEDNQESVPVVLQVNT
AGEPQPEETPAPTDLQFYEVTDTKITITWNGPPSEVSGYRVTFEPVTPDDRPQKALQLPV
TPNAYAEITHLQPGTLYRFHIYAVHGGSESQPLVGDRRTKPDSPSELRFSDITENSALVM
WSAPQAQVTGYSLFITTDGSAHKHLRIPSHETQYTVSNLQPDTDYIVVLHSEQGSTLSEG
IRGTFTTTPLLGRAPPFSTDVTDTSIIISWSPVPRISYKLSVRPSQGGEAPREVTSGSGS
IYISGLTPGVEYTYSVQPIINGRKQGNPITRTAVTPLSPPTDLNVASNPDTGELNVRWRE
AQIPDISGYRVTCAPTNGQRGNSLEEFIRAGQTSGTLENLSPGVEYNVSVYTVKNHIESE
PISTTVTQDIPKVRYLGLANVSDTTIGIRWTGPNHTAVTGYRVTVAAAGESLPILEDSVD
SAARYYTVRGLEPGIDYHISVTAVTEETESEPTTITQQTQTAIPSPTNLNFGEVGPDSMR
VSWTRPSVQPTEISRFVIRYHPSNNDDDSHEVNVGGATSTFLLQNLLPVTEYLVSVVSVY
GERESSPISGRQTTTLDSPTGLDFSEVFTNSFTVHWIAPRAIITGYRLRYQPTTGGRYKD
ERLPPTRTYYTLTSLTPETEYSVQIYALSGSKESQPLTGTQATISDAPTDLEVTSSTPNS
ITISWEAPSIPVRYYRITHGETGESGPPKEFTVRGTESTATIPGLRPGTDYTITVYAVTG
RGDSPASSTPTIITHRTGTDRAPSPSDLDVTNIEDNSMTVRWSPAKGPITGYRVTGAPKE
GVGPTFTKVVGPDQTQLKVTGLQPTVEYVLSVYAIGPDGESPLGVERGTTSEVHIPTAVD
RPTDLSFRDVDSTSLRVTWTPPRGPVTSYRVLYSSPEEGEREWRPAPRGQDDSVLLRGLR
PGTQYTVKVLPINGATPGTMLRGAQATTVPAPTNIQFGEVGPSSFIVLWTPPSARLSGYR
VLITPKNNIAAPKQMNVAPDSTQVTVPGLLVSTLYEVHVYALKDSLSSRPLIGEVTTAED
ISPPRRVRISDVKDTSITLVWRTKMGEPMTGFLIEATPTSGSYPTVRKVIPEDARAVTIT
GLQPGVSYLISLYTLNGDSRSSPFTLTVTTGTPLNVLQTATNLTKCLQSVCFFLMLLLN
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgggatgctgcgggggtctgtagccgggctgctgctgctctgcgcgggcagc
gcggtgctcggggggccgcaggcgggcagaggcgaggagcagcagcagcaggtcgccctg
gacacggcgttcctggaggcgacccagtactccggcctgcaggagggctgtactgagaac
agtcggttctaccgggcgaatgaacagtgggaaagaccgtatatgggcagtactttactc
tgtacctgtcgaggatcagccggagtcacctgcgaatccaaaccagcaatggaggagacc
tgctacgataaagtgaacatgaggtcgtatcgcgttggcgagacgtacgagagacctaaa
gacggtatgatctgggactgtacctgtatcggctctggcaagggcaaaatcagctgcacc
atcgccaatcgctgccacgagggcgggcgctcctacaggattggtgagaagtggacccgc
ccccacgacaccggcgactacatgctggagtgcgtctgtttgggcaacggcaaaggggag
tggacctgcaaacccgtggcggagcgatgctacgattcctcggtgggctcctcgtatgtg
gtgggtcagacgtgggagaagccgtatcagggctggatgattgtggactgcacgtgtttg
ggagaaggaaacggacgcatcacctgcacctccagaaatcgctgtaatgatcaggacacc
aggaagtcgtaccgtatcggcgagacctggagtaaagtggacactaatgggcacagactg
cagtgcctgtgtacgggtaacggccggggggagtggaagtgtgagagacactcgtctaca
cacactgcgctgggtcctggaacaggtatggagctggtggctcaggtcagacccgtcact
catcaggtggatgtggtgaatcagctggtggaggaggagggatcgtgccgggtggcctcc
gaggtgatctactctaacggcatgagctgggtccagactcagggcagccagcagaggatc
tgcacctgcgttaacggaggaatcggctgcgaggattgggatggtcagtcttctcaggta
tatggtgggaactctaatggtcagccgtgtgtgttccccttcgtgtttgagggaaagact
cattattcctgcatctctgaaggacgaaccgacgggcagctctggtgcagcaccacctcc
gactacgactcagacggacagtactccttctgtacccagaggaacttgatggtgacgacc
cgcggagggaactccaatggcgccatgtgcaaattccccttcatctacaacggacgcaac
tacaccgactgcaccgccgacggacgccgcgacggcatgaagtggtgcggcaccaccacc
aactacgacgacgagcagcgcttcggcttctgccccatggctgctcatgaagaaatctgc
acagctaatgatgcgatgtatcgtctgggtgaccaatgggacaagcgccacgacaccatg
ggtcacttgatgcgctgcacgtgtttgggaaatgggcgtggcgagtggagttgcattgcc
tactctcaactacgagatcagtgcatcgtagacggccacacgtacgaggtgaaccagaac
ttcgacaagcgccacactgagggctacatgatgaactgcacctgcttcggtcagggccga
ggacgctggaaatgcgacgccatcgatcagtgccaggaacccgagtccaaggcgttctac
cagattggagaagcgtgggataaggtgatccaaggaatccggtaccgatgctactgccac
gggaacggcatcggagaacaggcctgcgaacccctgctgtcctccgttccagtccgggtg
atcatcactgagacaggaaacaagcccaattctcatcccatccagtggaatccaccttca
tcagcccacatcaccgagtacatcctcaaatggagagtgaaaaacaccagaaccccgtgg
aagcaggcggttattccaggccacatcaacttctacaccatctcaggcctgaagtccggt
ctgacctacgaaggtcagctcgtctccatcctccactctggacgccgcgagacaaccaga
ttcgacttcaccacctcccacggctccttgattcccactgagggcatcacgactccgcct
cccccggtgttggacacgtcggagtcagtgacggagatcacctccagcagcttcgttatc
tcctgggtttctgcgtccgacaccatctccggcttcagggtggagtacgagctctcagag
gagggagcccaacccagtgtgattgacctcccccgcactgccacctccgtcaacatcgag
aacctcctgcccngacgcagatacaacgtacaggtgttcgaagttcagccagggggcgac
actaacatcatcctgcacaccacgcagaccactgctcctgacgctcctacagaccacagg
gttacaggtgttgaagagacgtccatcgtgatctcctggacccgaccacaagctcccatc
acagggtaccgggtggtctacaccccgtctgaggagggcagcagcaccgagctcatcctg
cccgagtccgtcaccaccgtcaccctggtggacctccagcccggatcccagtacaacgtc
agcatctacgccgtggaggacaaccaggagagcgtaccggtggtgctgcaggtcaacacc
gctggagaaccacagcctgaagagacccccgccccgacggacctgcagttctacgaggtg
accgacaccaagatcaccatcacctggaacggccccccgagcgaggtgtccggctacaga
gtgacctttgaacccgtaacccccgacgacagaccccagaaggcactccagcttcccgtc
actcccaacgcctacgccgagatcacccacctgcagccgggaacgctgtaccgcttccac
atctacgccgtacacggaggaagcgagagccagccgctggtgggggacaggagaaccaaa
cccgactctccgtcagagctacgcttctccgacatcacggagaacagcgccctggtcatg
tggtctgctccacaagctcaggtcacaggctacagtctgttcatcaccacagacggctcc
gcccacaaacacttgaggatcccctcccacgagacccagtacaccgtcagcaacctgcag
ccggacaccgactacatcgtggtcctgcactcggaacagggcagcaccctcagcgagggc
atccggggcactttcaccaccactcctctactgggcagagctccacccttctccacggac
gtcaccgacacctccatcatcatttcctggtctccagttcctcgcattagttataaattg
tctgtaaggcccagtcagggaggtgaggcacccagagaagtgacctccggctctggcagc
atctacatctccggtctcacaccaggagtggaatacacctacagcgtccagccaatcatc
aacggccgcaagcagggcaaccccatcactcgaaccgccgtcacgcctctgtctcctccc
actgacctgaacgtggcctccaaccccgacaccggcgagctcaacgtcaggtggcgcgaa
gctcaaattcccgatatcagcgggtacagagtaacgtgtgcgcccactaatggtcagcgg
gggaactctctggaggagttcatcagggcggggcagacgtccggcactctggagaacctg
agtcccggagtggagtacaatgtcagcgtctacaccgtcaaaaaccacatcgagagcgag
cccatctccaccaccgtcacacaggacataccaaaggtgcgatacctcggcctcgccaac
gtgagcgacaccaccatcgggatccgctggaccgggccgaaccacacggccgttactggg
taccgcgtcacggtggcggcggccggcgagagtttacctatcctggaggactcggtggac
tcggccgccagatattatacggtgcgcgggctggagccgggcatcgattaccacatcagc
gtcaccgcggtaaccgaggaaaccgagagcgaacccaccaccatcacccagcagacccag
accgccatcccgtctcccaccaacctgaacttcggagaagtgggacccgactccatgagg
gtgtcctggacacgcccctcagtccagccaaccgagatcagccgattcgtgatccgctac
cacccatccaataacgacgacgacagtcacgaggtcaacgtgggcggagccaccagcacc
ttcctgttgcaaaatctcctgccggtgacggagtacctggtgagcgtggtttccgtgtac
ggcgagagagagagctcaccaatctccggcagacagacaacaactctggactctcccacc
ggtctggacttctctgaagttttcaccaactccttcaccgtgcactggatcgccccgcgc
gccatcatcaccggctaccgcctgcgctaccagcccaccaccggggggcgctataaggac
gagcgactgccccccacccgtacctactacaccctgaccagcctgacccccgagaccgag
tacagcgtccagatctacgccctcagcggcagcaaggagagccagccgctcaccggcact
caggccaccatctcagacgctcctaccgacctggaagtgacatcatcaaccccgaacagc
atcactatttcctgggaagcaccttctatccctgtccgttattacaggatcacacacgga
gaaacaggagagagcggcccacccaaagagttcaccgtgcgaggcaccgagtccacggcc
accatccccggcctccgcccaggaaccgactacaccatcaccgtgtacgccgtcaccgga
cgaggagatagccccgcctccagcacccccaccatcatcacacaccgcaccggcaccgac
agagctccatccccctcagatctggatgtgacgaatatcgaggataactccatgacggtg
cgctggagtcctgctaaaggccccataaccggatacagggtcacaggagcccccaaagag
ggagtgggacccaccttcaccaaggtggtcggcccagatcagacgcagttgaaggtgaca
ggtctgcagccgactgtagagtacgtgctgagcgtttacgctatcggaccagacggagag
agccccctgggggtggagagaggaactacgagtgaggtgcacattcccacggccgtggac
cgtcccaccgacctgagcttcagagacgtggacagcacctccctgagggtgacctggacc
cccccgcggggtcccgtcacctcctaccgcgtcctgtactccagcccggaggagggcgag
cgggagtggcgtcccgcgcctcgcggtcaggacgacagcgtgctgctccgcggcctccgc
cctggaacccagtacaccgtcaaagtcctgcccattaacggagccacgcccggaaccatg
ctgagaggagcccaggccaccactgtccctgcccccaccaacatccagtttggtgaagtt
ggcccctcctccttcatcgtgttgtggactccgcccagtgccaggcttagcgggtatcgt
gtgctgatcacccccaagaacaacattgccgcgcccaaacagatgaacgtggccccagac
tccacgcaagtgaccgtacccggactcctggtgtcaaccctgtacgaggttcacgtctac
gccctgaaggattccctcagcagccgacccctgatcggagaggtcaccacggctgaagat
attagccctccgcgccgcgtccgcatctcagacgttaaggacaccagcatcacgctcgtc
tggcgaaccaagatgggcgaaccaatgacaggattcctcattgaggccacgcccacctct
ggcagttatccaactgtaaggaaggtgattccagaagacgcccgcgccgttaccatcaca
ggtcttcagcctggtgtttcctacttgatcagcctctataccctgaatggagacagccgc
agttcaccattcaccctcaccgtcaccacaggtacaccattaaacgtgctacagactgcc
accaacctcacgaaatgcctccagagtgtctgtttctttctgatgttgctacttaactag
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