Astyanax mexicanus (Mexican tetra): 103046769
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Entry
103046769 CDS
T05042
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
103046769
NCBI-ProteinID:
XP_007228030
Ensembl:
ENSAMXG00000002022
UniProt:
A0A8B9GMI6
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAVAPLLVILVQAAILPAVVGGAYYGHKPQYQQHQQHQQHQPMPQIPHMGMGKEMPHMQY
PHYRKEMPQLPMHMNKGIQDKKGETIPRGDSSQRGEQGMPGEAGPQGPPGPAGPAGPAGP
PGPDGPQGTGLPGPAGNPGPIGPPGPPGIGKPGLAGVPENPGDIGPKGQQGEQGPSGADG
EPGIPGPPGPPGPQGLPGIGRPGGQGLQGQQGPKGEPGHKGLPGLPGLPGPKGDKGIGLP
GPQGPRGPPGHQGLPGHKGLPGHGRPGLPGLPGPVGKPGEQGQAGPQGPIGQPGEEGQQG
PQGLPGIGKPGEIGLPGQPGAPGDKGLTGPPGLPGKPGLPGFGKPGFPGPKGDKGMGGLP
GALGPKGDKGYAGPPGMTGPQGPSGPAGPPGPMGPPGSMGMPGPKGEGGEGGVKGDQGPT
GVQGPTGLPGQPGEPGEDGEPGPRGLPGPIGPKGDGGEKGQPGSPGSPGMPGLKGEGGAP
GPEGPQGPNGIPGLTGPAGPIGQPGPHGPKGENGAPGQAGPPGEGSPGPAGPRGTEGPSG
PAGPAGVPGPPGPPGPPGPPALSPEMMGVLSEMGPALDGVKPDGYKKGKYGGGGDVMGAN
GLEMPAFTAKLTTPFPPVGSPVVFDKLLYNGRQNYNPQTGVFTCDLPGIYYFSYHVNCKG
ANVWVGLYRNGEPLMYTYDEYKKGILDQASGSAVVPLQPGDTVHIQLPSDQAAGLYAGQY
VHSSFSGFLLYPM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggctcctctcttggtgattttggttcaagcagcaatactgccagctgttgtt
ggaggggcatactatgggcacaaaccgcagtatcagcagcaccagcagcaccagcagcac
cagccgatgccacaaatacctcacatgggcatgggaaaagaaatgcctcacatgcagtac
ccacattataggaaggagatgccacaactacctatgcatatgaacaaaggcattcaggac
aaaaaaggtgagaccattccaagaggtgatagcagtcaaagaggtgagcagggtatgcct
ggtgaggctggaccacaagggcctcctggacctgctggaccggctggacctgcaggacct
cctggacctgatggaccacaaggcacaggtttgcccggtcctgcaggtaatcctggtcca
attggccctccaggaccacctggaattggtaaacctggattggcaggtgttcccgaaaat
cctggtgatattggaccaaagggacaacagggtgaacagggacccagtggagcagatggc
gaaccaggtattccaggaccacctggcccccctggtccccaaggcttgccaggaattggg
agaccaggtggacaaggactccaaggacagcaaggacctaaaggagaaccaggacacaaa
gggctacctggcttgccaggcttacctggaccaaaaggggataaaggaataggactacct
ggacctcaaggaccaagagggccacctgggcaccaaggactaccaggacataaaggacta
ccaggacatggcaggcctggcttacctggtttgcctggtcctgtaggtaaaccaggagaa
caagggcaggctggaccacaaggtcccatcggccaacctggtgaagaggggcagcaagga
ccacaaggtcttcctggtattgggaaaccaggagaaattggattaccaggtcagccaggt
gctccaggtgataagggattaacaggtccaccaggtttgccagggaaacctggactgcct
ggatttggcaagccaggattccctggtccaaagggtgacaaaggaatgggaggattacct
ggtgctcttggaccaaaaggagacaaaggatatgcaggtccaccaggcatgacaggaccc
caaggacccagtggtccggctggtcctccaggacctatgggacctccaggtagtatggga
atgccaggacccaaaggagaaggaggtgaaggtggagtaaagggggatcaaggtccaact
ggagtacaagggcctactggtcttccaggccaaccaggtgaaccaggtgaggatggcgag
cctgggcctagaggacttccaggaccaataggtcccaaaggagacggaggagaaaaaggt
caacctggatctcctggatctcctggcatgcccggtctaaaaggagagggaggtgcacca
ggtccagaagggccgcaaggtccaaatggcattccaggtcttaccggaccagcaggacca
atcggacaacctggcccacatggacctaaaggtgagaatggcgcccccggccaagctgga
cctcctggtgagggaagtcctggacctgctggtcctcgtggaacagaaggtccaagtggc
ccagcaggacctgcaggtgttccaggaccccctggtcctccggggccacctggaccacct
gccctgtccccggaaatgatgggagttctgtcagaaatgggaccagcccttgatggagtg
aagcctgatgggtacaaaaagggaaagtatggaggcggaggtgatgtgatgggtgctaac
ggtctggagatgcccgcttttactgctaagctgaccactcccttccctccagttgggtca
ccagtagtgttcgacaagctgctgtacaacgggcgacagaattacaacccacagacgggc
gtcttcacctgtgaccttcccggcatctactacttttcttaccacgtgaactgcaaaggt
gctaacgtgtgggtgggtctctaccgaaacggagagcccttgatgtacacctatgatgag
tacaagaagggcattctggaccaggcctctggtagtgccgtggttccattacaaccagga
gacactgtccacatccagctaccatccgatcaggctgcaggactttatgcaggacaatat
gtccactcctctttctctggcttcctgctgtacccaatgtag
DBGET
integrated database retrieval system
