Astyanax mexicanus (Mexican tetra): 103047204
Help
Entry
103047204 CDS
T05042
Symbol
limk1
Name
(RefSeq) LIM domain kinase 1 isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103047204 (limk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amex01001
]
103047204 (limk1)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103047204 (limk1)
Protein kinases [BR:
amex01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
103047204 (limk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
RelB_N
PDZ_2
RIO1
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
103047204
NCBI-ProteinID:
XP_022534770
LinkDB
All DBs
Position
17:14510951..14603520
Genome browser
AA seq
656 aa
AA seq
DB search
MRLMLLCCTWKDERMGEDEAGGSLPVCAGCRQRIYDEQYLQALNTDWHTVCFRCCECSAS
LSHWYYERDGRLFCKKDYWAKFGELCHGCSETITTGLIMVAGEQKYHPECFTCLNCRTFI
GDGDTYALVERSKLYCGHCYYQNIVTPVTLPDSPCSRIPHTVTLVSIPASTDGKRGFSLS
IDQGTSPNGYGPDHNHTVRVSEVDSESISPDVKNSIHVGDRILEINGTPIRNVPLDEIDL
LIQETSRLLQLTIEHDPHDQGGSVDHVDGPTPLSEGPSPTTPITQPPHQDVNNLRTRMIT
RSYSIDKSPCSSNAASPLSLRKDIGRSESLRVVTNRTHRIFRPSDLIHGEVLGKGCFGQA
IKVTHRETGEVMVMKELIRFDDETQMTFLKEVKVMRCLDHPNVLKFIGVLYKDKRLNFIA
EYIKGGTLRDIIKKMDSNYPWIQRVSFAKDIASGMTYLHSMNIIHRDLNSHNCLVRENNS
VVVADFGLARLMVEDKNQDKLGKIQGMKKPDRRKRYTVVGNPYWMAPEMIHGKSYDEKVD
IFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVKGFLEHYYPQDCPSTFFPMAALCCDLDA
EKRPAFAKLEEWLENLKMHLEMRLPVVSELEQVHRDFWQKNPPGENRLPTHREQPE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgcatgggagaggacgaagct
ggtggaagcttgcctgtgtgtgcaggatgcagacagcgcatctatgatgagcagtacctc
caggcgctcaacactgactggcacacagtttgcttcagatgctgtgaatgcagtgcctcc
ctctctcactggtactatgaaagagatggccgcctcttctgtaagaaggactactgggct
aagtttggcgaactgtgtcatggctgctctgagaccatcaccaccggcctcatcatggtt
gcaggagaacagaagtatcacccggagtgtttcacctgcctgaactgccggaccttcatt
ggggatggagatacgtacgctctggtggagaggtcgaagctctactgtggacactgttat
tatcagaacattgtgacgcctgtaaccctgcctgactcgccctgctcccgcatcccccac
accgtcacgctagtgtccattcctgcctccactgacggcaagcgtggcttctccctgtct
atcgaccagggcaccagtcctaacggatacggccctgaccacaaccacacagttcgagtg
tctgaggtggattcagagagcatcagcccggatgtgaagaactccatacacgtaggcgat
cgcatccttgagatcaatggcacacccatccgcaatgttcccctcgatgagattgatctg
ctcatccaagagaccagtagacttctgcagctgacaattgagcacgacccccatgaccag
ggaggctctgtggatcatgtggacggccccaccccactctctgagggccccagccctacc
acccccatcacacagcccccgcaccaggacgtcaacaacctccgcacacgcatgatcacg
cgaagctacagtattgataagtctccgtgctccagtaacgccgcctccccgctctccctg
cggaaggatatcgggcgctccgagtctctccgtgtggtgaccaatcgcacacacaggatc
ttcagaccttctgacctcatccatggggaggtgctgggcaagggctgctttggccaggct
attaaggtgacccacagagagacgggcgaggtgatggtgatgaaggagctgatccgcttt
gacgacgagacgcagatgacctttcttaaggaggtgaaagtgatgagatgtttggaccac
ccaaatgtgctgaagttcatcggggtcctctacaaagacaagcggctgaacttcatcgct
gagtacatcaaaggaggcaccctgagagacatcattaagaaaatggacagcaactatcct
tggattcagagagtgagctttgccaaggacatagcctctgggatgacttacctgcattcc
atgaacatcatccatcgtgatctcaactcgcacaattgtctggttagagagaacaacagt
gttgtggtggcagactttggcctggctcgcctcatggtggaggacaaaaaccaggacaaa
ctggggaagatccagggaatgaaaaagccagacaggaggaagagatacacggtggtggga
aacccctactggatggctccggaaatgattcacggaaaaagctacgacgagaaagtggac
atcttttccttcggcatcatgctgtgtgagatcatagggcgagtgaatgcagacccggac
tacttgcccagagccatggacttcggcctcaatgtgaagggattcctggaacactattac
cctcaggactgcccctctaccttcttccccatggctgccctgtgttgtgacctggatgca
gagaaaaggcctgctttcgctaagcttgaggaatggcttgagaacctgaagatgcacttg
gagatgcggctccccgtggtctcggagctggagcaggttcaccgggacttctggcagaag
aaccctcccggcgagaacaggctgcccactcaccgagagcagcccgagtag
DBGET
integrated database retrieval system
