Astyanax mexicanus (Mexican tetra): 111188513
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Entry
111188513 CDS
T05042
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
111188513
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111188513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
U-box
zf-C3HC4_4
zf-C3HC4_3
SPRY
zf-C3HC4_2
zf-RING_5
zf-RING_2
Prok-RING_4
zf-Nse
zf-RING_10
DUF5858
Perilipin
End3
Baculo_PEP_C
FUT8_N_cat
zf-RING_6
DUF4200
Motif
Other DBs
NCBI-GeneID:
111188513
NCBI-ProteinID:
XP_022518035
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAAKYPLSEQELSCPVCCEIFRDPVVLSCSHSVCRTCLQQFWKTKGSQECPVCRRRSSKG
EPPCNLVLKNVCEAFLESRSQRSSAGSEGVCSLHNEKLKLFCLDDQQPVCLVCQTSKNHK
THDCCPIDEAVTDCKTKLQTALEPLQKNLKVLEEAKRDCDQTAAHIKTQTQHTERQIKQE
FEKLHQFLRDEEAVRIAALKEEEEQKNQMIRRKIEEMNEEISSLSDTIRNIEKEMKAEDI
QFLQNFKSTEKQVQRSPKHPEKTSGALINVAKHLSNLKFRVWEKMQEIIQYTPVTLDPNT
AHPKLHLSDDLTAVEYRHQKSSVPDNPERFDKYWCVLGSEGFNSGTHCWDVQVGDRDSWI
LGLIPESVTRKGTTFSDSVWGLGYNKSEDKYLTRCPRQSGLSLTPKEKLQRVRVQLDWDR
GKLTFTDLLTNTHLHTITHTFTERLLPLFCNESDYPLRILPVKTSVTVKQHS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaataccctctttcagaacaagagctttcatgtcctgtgtgctgtgagatc
ttcagggatccggtggttctgtcgtgttcccacagtgtgtgtagaacctgtctgcagcag
ttctggaagactaagggctctcaagaatgtccagtttgtaggagaagatcctctaaaggt
gaacctccctgtaatctggtactgaagaatgtgtgtgaagcttttctggagagcaggagt
cagagatcttcagcagggtctgagggggtctgcagtctgcacaatgagaaactcaagctc
ttctgtttggacgatcagcagcctgtgtgtttggtctgtcagacatcaaagaaccacaaa
acacacgactgctgtccaatagatgaagctgtgactgactgtaagactaaactccagact
gctttggagcctctacagaagaacctgaaagtcttagaggaagctaaaagagactgtgat
caaacagcagcccacattaagacgcagacccagcacacagagagacagataaagcaggag
tttgagaagcttcaccagtttctaagagatgaagaagcagtgaggatagctgcactgaag
gaggaagaggagcagaagaatcagatgataaggaggaagattgaggagatgaatgaagaa
atatcatctctttcagacacaatcagaaatatagagaaggagatgaaagctgaggacatt
caattcttacagaacttcaagtctacagagaaacaagttcagcgctcaccaaagcatcca
gagaagacatcaggagctctgatcaatgtagccaaacacctttccaacctgaagttcaga
gtgtgggagaagatgcaggagattatccagtacactcctgttactctggaccccaacact
gcccacccaaaactccacctgtctgatgatctcactgctgtagaatacagacaccaaaaa
tcatcagttcctgataatccagagagatttgataagtactggtgtgttctgggttctgag
ggttttaactcagggacacactgctgggacgtccaagttggagaccgtgattcctggata
ctgggtttgatcccagaatctgtaacaagaaagggaacaactttcagtgattcagtgtgg
ggtctgggttacaataaaagcgaagataaatacttgacacgctgcccaagacagtctggt
ctctctctcacccctaaagagaagctgcagagggtcagagtgcagctggactgggacagg
gggaaactgaccttcactgatcttctaaccaacacacacctgcacactataacacacact
ttcactgagagacttttacctcttttctgtaatgagtctgattatcctctgaggatttta
ccagtgaagacgtcagtaacagtgaaacagcacagttaa
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