Alteromonas macleodii English Channel 673: AMEC673_08225
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Entry
AMEC673_08225 CDS
T02254
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amg03016
]
AMEC673_08225
Enzymes [BR:
amg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMEC673_08225
Transfer RNA biogenesis [BR:
amg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMEC673_08225
Prokaryotic type
AMEC673_08225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AFT74339
LinkDB
All DBs
Position
1951048..1952019
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AA seq
323 aa
AA seq
DB search
MARRRKGREINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGEVVEEKPVDVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYHYARQGIEIEREPRDIEVYELDVLRIELPFVEMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLNKLIEIQESLEEGDFKALDDLLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGTCSETLSEGVSYRVYHGDDTSGIFLGVGEGVL
DPKDQGIPKQEVFVNPKRRVVYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgagattaacggcatagtattgcttgataaaccgctt
ggtgggtcatctaaccaactgcttcaaaaagtgcgctggctgtacaaagctgcgaaggct
gggcatacaggcgcacttgatccacttgccagtggcatgttgccgctctgcttgggtgaa
gctacgaagttttctcagtttcttctggatgcagaaaagacctacgaggtaactgctcaa
ctaggtgttcgcaccaccacgtctgacgccgatggcgaagtggttgaagaaaagcctgtt
gatgtaagcgaagaacaagtacgtgatgcgtgcttggcgtttctaggtaagagtaaacaa
atcccgtccatgttttcagcgcttaaacatcaaggtaagccactttatcactatgcacgt
caaggtatagagattgagcgtgaacctcgtgatattgaagtgtatgaattagatgtactg
cgtattgaactgccgtttgtagaaatgcgcattaaatgcagcaagggcacttatattcgc
tctatcgtagatgatttaggtcagaaccttggctgtggcgcctacgtgactcgcttacac
cgtacggaagtagcagactatcctacggataaaatggtctcgctgaacaagttaattgaa
attcaggaatcactggaagaaggtgactttaaagcgctggatgacttattgattcctatg
gataccgccgtaagtcggttgccatttgtgaccattaacgacgctgaaagaaaccgtttt
gataacggccaatctgtaaaagggacttgtagcgaaacgctgagtgaaggcgtgtcttac
cgcgtttaccatggcgacgataccagtggtatattcttaggcgtaggggaaggggttctt
gacccgaaagaccaaggtatccctaaacaagaagtgtttgttaacccaaaacgtcgagtt
gtttatagttag
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