Alteromonas macleodii English Channel 673: AMEC673_17735
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Entry
AMEC673_17735 CDS
T02254
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
amg
Alteromonas macleodii English Channel 673
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amg03009
]
AMEC673_17735
Enzymes [BR:
amg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AMEC673_17735
Ribosome biogenesis [BR:
amg03009
]
Prokaryotic type
rRNA helicases
AMEC673_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
AAA_19
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AFT76225
LinkDB
All DBs
Position
complement(4172642..4174021)
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AA seq
459 aa
AA seq
DB search
MTVETVKQLDINPAITKALDSQGIYQLSPIQAQSLPEALQGKDVIGQAQTGSGKTLCFVI
PALQHVEVNDFTTQAIILCPTRELADQVAQQCRMAAKNIGNIKVTTLCGGQPMGPQIQSL
KHSPHIIVGTPGRVMDHVEKRRVDLSNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQ
TLLFSATFTEQIERVAKQYLHNPVTCKVESQDSKPAITQLGYNVLPHTRTQALKAVLTHY
QPKNAIVFCNRKVQVNEVVEELIEDGFSAAGLQGDLEQHQRTSVLMQFASDALQVLVATD
VAARGLDIDDVACVINYTVSEEPETHIHRIGRTARAGAQGMAVTLVSDDEEHFLRKIEVL
QESDIPLKGAQSLRFHKNKITQPEFTCISLSAGKKEKLRPGDLVGALTKDAGIPGDDLGK
IKVQNSMSFVAVKTRSVKKAMAHFREGKIKGKRIRARKL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaaacagttaagcaattagatataaaccctgccatcaccaaggcgctagac
tcacaaggcatttaccaactttcccctatacaggcacaatcgctccctgaggcgttgcag
gggaaagatgtgataggccaagcgcagacgggcagcggcaagactctgtgctttgtaatt
cctgccttgcagcacgtagaagtgaatgattttaccacgcaggctatcatactttgtcct
acccgagagcttgctgatcaagtggctcaacagtgccgtatggcggctaagaacattggt
aatattaaagtaaccacgttatgtggtggccagcctatggggccgcagattcagtcattg
aagcatagccctcatattattgtgggcacgccgggtcgcgtaatggaccatgtggaaaag
cgtcgagttgacctaagtaacgtaaagttgcgtgtcctcgatgaagccgatcgcatgtta
gatatgggctttgaagacgatttacgcattattttcggtcaaacgccaaaacaagtgcaa
accctattgttttctgcaacctttacggaacaaattgagcgtgtagccaagcagtacctg
cacaacccggtaacctgtaaagttgagtctcaagacagtaaacccgctatcacccaattg
ggctacaacgtgctcccgcacacacgcactcaggcccttaaagcggtacttacccactac
caacctaaaaatgccattgtattttgtaaccgcaaggttcaggtaaatgaagtggttgag
gagcttatcgaagatggctttagcgcagctggacttcagggggacttggaacagcatcaa
cgcacatcggtgctaatgcagttcgccagcgatgcgctacaagtacttgttgccaccgat
gtagctgcgcgagggctggatattgatgatgttgcctgcgtaattaattacacggtaagt
gaagagccggaaacccatattcaccgcattggtcgcacggcgcgagcaggcgctcagggc
atggcggtaacgctagtcagtgatgacgaagaacactttttgcgaaaaatagaagtattg
caagaaagcgatattccacttaaaggtgcgcaaagcctgcgttttcacaaaaacaaaatt
actcagcctgaatttacctgtatttcactaagtgcgggtaaaaaggaaaagcttcgccca
ggcgatcttgtgggggcacttaccaaagatgcaggtattcctggcgacgacttgggcaaa
attaaagtgcaaaacagcatgagttttgtcgcagtaaaaacgcgaagcgtgaaaaaagcc
atggcgcactttagagaaggaaagatcaaaggaaaacgtattagagcccgaaagctttaa
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