Aminobacter sp. SS-2016: Amn_44240
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Entry
Amn_44240 CDS
T09420
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amis
Aminobacter sp. SS-2016
Pathway
amis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amn_44240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amis03400
]
Amn_44240
Enzymes [BR:
amis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Amn_44240
DNA repair and recombination proteins [BR:
amis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Amn_44240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
BBD39544
LinkDB
All DBs
Position
4588173..4589624
Genome browser
AA seq
483 aa
AA seq
DB search
MTGQPAFPLAAYAVHLAGPTDFDGWRDAARRLSTNEVKPEDIEWHVGGEGDELPAPTPGV
ELRVSRDFIERAAIVTCHSDSERFALLYRLLWRQRSEPHLLRIASDPDVRRFEAMEKSVR
RDEHKMHAFVRFRKIGDGDEERFVAWFEPDHFILELAAPFFVRRFTGMHWAILTPHGSAE
WDRERLALGPGASKDDAPAADQSEEMWRTYFASIFNPARLKVKAMQAEMPKKYWRNLPEA
SLIPELISGADAAAREMIARMPTMPAAHHQAIQARHWPALEPSPETEAHSIDALRQQASQ
CRRCPLWSEATQTVFGEGSDNAELVFVGEQPGDQEDLQGRPFVGPAGKIFDAVLGEAGIE
RTAVYVTNAVKHFKFEPRGKRRIHSKPNAGEVQACRWWLAQELTLLKPKLMVALGATAAQ
SLLEAPVAITKQRGQTIKRDDGLAVFLTIHPSYILRIRDPQEAAAERARFVADIRTVREM
MAG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccaacccgccttcccactggccgcctacgccgtgcatctcgccggcccgacc
gacttcgacggctggcgcgatgcggcacgcaggctgagcaccaacgaggtgaagcccgag
gacatcgaatggcatgtcggcggcgaaggggacgagctgccggcgccgaccccgggcgtc
gaactcagggtctcccgagatttcatcgagcgcgcggccatcgtcacctgccattccgac
agcgaacgtttcgcactgctctatcggctgctgtggcggcagcgcagcgagcctcatttg
ctccgcatcgcctccgaccccgacgtgcgccgcttcgaggcgatggaaaagtcggtcagg
cgcgacgagcacaagatgcatgccttcgtccgtttccggaagatcggcgacggtgacgaa
gagcgcttcgtcgcctggttcgagcctgaccacttcatcctcgaattggcagcaccgttc
ttcgtgcgtcgctttaccggcatgcactgggcgatcctgacgccacacggctcggctgaa
tgggaccgcgaaagactggcgctaggccccggcgcttcgaaggatgatgcgcccgccgcc
gaccagtcggaggagatgtggcggacctatttcgccagcatcttcaatcccgcccgcctc
aaggtgaaggcgatgcaggcggagatgcccaagaagtattggcggaaccttcccgaggcg
tcgctcattccggagctgatatcaggcgccgacgcggctgcccgggaaatgatcgcgagg
atgccgacgatgcccgcagcgcatcaccaggcgatacaagccagacactggccggctttg
gagccgtcgccggagacagaggcgcattcgatcgacgctctgcgccagcaagcaagccag
tgccggcgctgtccgctgtggagcgaggcgacgcagacggtgttcggcgagggttctgac
aatgccgaactggtgtttgtcggcgagcagcccggtgaccaggaggacctgcagggccgg
ccattcgtcggcccggccggcaagatcttcgacgcggtgctcggcgaagccggcatcgag
cggacggcagtctacgtcaccaatgccgtcaagcacttcaagttcgaaccgcgcggcaag
cgtcgcatccacagcaagcccaatgccggcgaggtgcaggcttgccgctggtggctggcg
caggagttgacgctgctaaagccgaagctgatggtggcgctcggcgcgaccgcggcccag
tcgctgctggaggcgccagtggcgatcaccaaacagcgcgggcagaccatcaaacgcgac
gacggcctcgccgttttcctgacgatccacccgtcctacatcctgcgcatccgcgacccg
caggaggcggcagccgagcgcgcccgcttcgtcgccgacatcaggacggtgcgcgagatg
atggcaggctaa
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