Alligator mississippiensis (American alligator): 102558073
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Entry
102558073 CDS
T03087
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102558073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amj04054
]
102558073
04090 CD molecules [BR:
amj04090
]
102558073
Pattern recognition receptors [BR:
amj04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102558073
CD molecules [BR:
amj04090
]
Proteins
102558073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_9
TIR_2
LRR_6
LRR_12
Motif
Other DBs
NCBI-GeneID:
102558073
NCBI-ProteinID:
XP_006258961
LinkDB
All DBs
Position
Un
AA seq
1040 aa
AA seq
DB search
MATIPYDLFVLLLLIQPEVSLSVHHQWISKDRPCKIKAKNNSSSILLDCSKQKLAAVPQE
IHENVTDLILSFNWIKEISTKDFYNFKDLRSLKLNWNWYVKPKESYFDFSLKPLGIANGT
FSNLRYLKELKLNGNQLNKVPTGISPSITALSLKSNKIVSIQKNTFSELPNLQELYMDEN
CYYGNACEASFNIETGAFSVLTNLIVLSLSYNSLTRVPAELPLSLQELYLSHNKIRTISQ
DDFKKLVNLKVLDLSENCPKHFNTLFPCEPYSGNSAIQINPLAFQNLNKLKTLLLTGNSL
MNVPSTWFQNTPQLEVLHLASNFLRKAIATGEFLQHVSSLEELDLSFNYQKQVYSQYLNL
SQYFSFLVSLKRLYIKGYVFKELDRQHLKPLFPLKKLKILDLGINFIKRVDISVFQEFSN
LTQIYLKQNQIVPQTTEKTISFKSLEKKDLLTNSHYTFIHKDNSSLLEYSYNNKKHSNYF
LSQHCISYGKALDLSLNNIFFITPDQFKGFEDIACLNLSSNALGQAFKGTELIILPNLKY
LDLSFNKLDLTSFSVFKELPNLEVLDLSYNKRYFVVPDFEHQLMFIDNFPNLKILNLSWN
EISSLTTSKLRSISLKKLDFKGNNLGYLWKNGDTSHIQLFKHLRNLTHLDISHNRLRNIP
IKVFENLPWSLTELYINNNKIHTLSWEKLRYFKSLKLLDLTQNKFKAVDVLYNYTQSLQT
LKLRENKISKISFVFSKRVSSLLYLDLSYNQLEVLNQSTFLSGIIQHLKVFKLKGNPFDC
TCKNSNFIRWIQKTKVPISQVARNVICMNPDNERRRSIILIDPYACNLDDVSAILFYISS
FITLSTMVIAVTKHFFYWDIWHKYYSCMAKLKGYRSTEKGKALYDAYIDYDTKDMAVTDW
VINELRVHLEESEGKQVLLCLEERDWEPGKAVIDNLAQSIQCSRKTIFVLTERYVKNGNF
RTAFYIALQRLMDENLDVIVFILLEPVLQHSQYLRLRRRIYKSSILDWPKNPRAEGLFWQ
SLKNTLLTDNTGHHKGVFSI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctaccataccatatgacctttttgttttacttcttctgattcaacctgaagtcagt
ctctctgttcatcaccaatggatttctaaggaccgaccttgtaaaataaaagcaaaaaat
aacagctcctcaattcttctggattgcagtaaacaaaagctggcagcagtcccccaggaa
atacatgaaaatgttactgacttgatactgtcttttaattggattaaagagatatctaca
aaggatttttacaactttaaggaccttagatctttaaaattaaactggaattggtatgtt
aagccaaaagaatcttattttgatttttctctaaagcctttagggatagccaatggaact
ttctcaaacttaagatacttaaaggaattgaagcttaatggcaatcagctaaacaaagta
cccacagggatttcacctagtataaccgctctaagtctcaagtccaacaaaattgtttct
attcagaagaacaccttctcagaactgcccaatttgcaggaactctatatggatgagaac
tgttactatggaaatgcctgcgaagcatctttcaacatagaaacaggggctttttctgtc
cttaccaacttgattgtgctgtcactctcctataacagtctgactagagtgccagctgaa
ctacccttgtctctgcaagagctttatctgagtcataacaaaataagaaccatcagtcaa
gatgattttaagaagctagttaatttaaaagttctggatttaagtgaaaactgcccaaaa
cacttcaatacactttttccatgtgaaccctattctggaaactcagccattcaaataaat
cccctagctttccaaaatcttaacaaactaaaaactttgcttttgactggcaattcactc
atgaatgtgccatctacctggtttcagaatacgccacagttggaagtgttgcaccttgca
tctaactttctaaggaaagcaatagctacaggagaattcttacaacatgtatcttcttta
gaggaacttgacttatctttcaattatcagaaacaagtatactcacaatatcttaacctc
tctcaatacttttcattcctagtatctttgaaacgattgtacattaaaggatatgtcttc
aaagaattagacagacagcatttgaaacctctatttcctcttaaaaagctaaaaatcctc
gatcttgggataaattttattaaaagagttgatatatctgtcttccaggaatttagcaac
cttactcaaatatatttgaaacaaaaccaaatagttccacaaacaacagaaaagactatt
tcttttaaatctttggagaaaaaagatcttttaaccaattcccattatacctttatacac
aaggataattcaagcctgttagaatattcttataataataaaaagcactcaaattacttc
cttagtcagcattgtatctcatatggtaaagctttggatttgagtctaaacaatattttc
ttcattaccccagatcagtttaaaggttttgaggacatagcttgtttgaatttatcttca
aatgcgcttggtcaagctttcaaaggcactgaattaattatcttacccaatcttaaatat
ttagatctctcatttaataaattggatttgaccagtttttctgtatttaaggaactccct
aatctagaggtattagaccttagctataacaagcgttattttgtagtgccagattttgag
catcagttaatgtttattgataactttcctaatttaaaaattttaaatttaagttggaat
gagatttcctcactgacaacatctaaactaagaagcatttcccttaaaaaattagacttc
aaaggaaacaatcttggttacttatggaaaaatggagacacaagtcacatccaattgttt
aagcacctcagaaatctgacacatcttgatatttcccacaacagacttcgaaatattccc
attaaggtatttgaaaatctgccatggagcttaactgaattatatataaacaacaacaaa
atacataccctcagctgggaaaaacttaggtactttaaatctttgaagttgcttgactta
actcagaataaatttaaggctgttgatgtcctgtacaattacacacagtccctgcagact
ctgaagttgagggagaacaagatttctaagatttcatttgttttttctaagagggtcagc
agtcttctctatcttgatttgagttacaaccaactggaagtcttaaatcagtcaactttc
ttatctggaattatacaacacttaaaggtttttaaattaaaagggaacccctttgactgt
acctgcaaaaacagcaacttcataaggtggattcagaaaaccaaagttcccatctcacaa
gtggcaagaaatgtcatttgcatgaacccagacaatgaaagacgtcgtagcattatcttg
attgacccttatgcttgcaatctggatgatgtttctgctatactattttatatttcatcc
tttattactttaagcactatggtgatagcagttacaaaacactttttttattgggatatc
tggcataagtattactcatgtatggcaaaactaaagggttataggtctacagaaaaagga
aaagctctctatgatgcttacattgactatgatactaaggacatggcagtaactgattgg
gtaataaatgaattacgagttcacctagaggaaagtgaaggcaaacaagttctcctttgt
ttagaggaaagagactgggagccaggaaaggccgttattgacaaccttgcacagagcatc
caatgcagcagaaagacaatctttgtcctgacagaaagatatgtgaaaaatggaaacttc
agaacagctttttacatcgccctgcagagactaatggatgagaacctggatgtgattgtg
tttattctgctggagccagtgttacagcactcccagtacttgcggctgaggaggaggatt
tacaagagttcaattcttgactggccaaagaatccacgagctgaaggacttttctggcaa
agtctgaaaaatactctgctcacagataacactgggcatcacaaaggggtgttcagtatt
tag
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