KEGG T03087: 102559324

Alligator mississippiensis (American alligator): 102559324

Entry

102559324         CDS       T03087

Symbol

NIPBL

Name

(RefSeq) NIPBL, cohesin loading factor

K06672

cohesin loading factor subunit SCC2

Organism

amj Alligator mississippiensis (American alligator)

Pathway

amj04110

Cell cycle

Brite

KEGG Orthology (KO) [BR:amj00001]
09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102559324 (NIPBL)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amj03036]
    102559324 (NIPBL)
Chromosome and associated proteins [BR:amj03036]
Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    102559324 (NIPBL)

SSDB

Motif

Pfam:

Nipped-B_C Cohesin_HEAT HEAT_EZ HEAT Cnd1 Cnd3 SchA_CurD

Other DBs

NCBI-GeneID:

102559324

NCBI-ProteinID:

XP_014449482

LinkDB

Position

AA seq 2796 aa
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMPQYKLSQNSMHGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVSSGMRNIHENKVSSQLSGNSANHHADNT
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGTPKGSRPPLILQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSNVSEGDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQPVSQQGTITPYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSAGNGSKPA
LLVSINLQQAGRVDSQATVTQDSDTIKKPEEIKQCNDGSIFVPQEDTVGVLKLKPENHPE
TLRKKLDSEGQKTDIQQNENKQTEVQQNESKRMESKHNESKQIEAKHESKHESKQTEVKQ
NESRQMEAKQNEGKQNNGKQEIRQRPETPKQKNEGRPETPKQKNEGRPETPKQKNEGRPE
TPKQKNEGRPETPKHRHDNRRDSGKPSSEKKSEISRHKQDVKCDPSRVKSESRSDPTKQR
PDGRSVPETPRRDHDSLKQKPEDRSESERYRGDPSKIRRPEYLRSSNKSEHDSKHGIKPD
SSKTEKLERKHRHESGEPRERLSSGEQKSRPDSPRIKQESKGDSSKSRPDKPGFKSPNSK
DERRTEGNKSKVDSNKAHTDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKT
EIKSEHKDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREEKSRSSCFKPNKNKS
SKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDND
SEEAFESSRKRHKKDRDDDKAWEYEEHDRRSSGDHRRSGHYHEGRRTSGGSRYRNRSPED
SDMDDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENL
EDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNI
QDGSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVI
ERVIQYTKFHLQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDI
VSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLIL
EEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNS
EEESNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTV
NKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVSSKMDQGS
IARILKQVSGEDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAMKS
QKDDEASEGTHHAKDVEATGQIMHRAESRKKFLRTIIKTAPSQFSTLKMNSDTVDYEDAC
LIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQR
GVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRD
ICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAMTRKILNIT
DVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLADSDN
KGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELV
VPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYY
GALSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVL
ELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVL
KNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQ
SSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIH
MKAVAGMKMSYLVQQAINTCLKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLL
NLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVK
TKKKERKPSSDEESESDSNSGSGSESEEEVSKPRKLRKRVDSDSDSDEENDINAVMKCLP
ENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVH
FHPKQTLDFLRSDMAHSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARN
KAITSLLGGGSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVM
DVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKE
SDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS

NT seq 8391 nt +upstreamnt +downstreamnt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtctcaca
gaccttttgaaccagctgcctcttccatcgcctttacctgctacaacaacaaaaagtctg
ctttttaatggacgaatagcagaagaggtgaactgccttttggcctgtagggatgaaaat
ctggtttcacaacttgtacacagcctcaaccaggtgtcaacagaccatatagaactgaaa
gataaccttggtagcgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagt
ggaatgatgatgccgcagtataaactctctcagaattccatgcatggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttatggcacaacagaacagcccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttacacaccacatcct
cagatgcaacaagcttcagtatcgagtcccattgtctcaagtgggatgaggaacatacat
gaaaataaagtttcaagtcagttgtctggcaattcagctaatcaccacgctgataatact
agacatggctcaaatgaagactacctacagatggtgcacagactaagtagtgatgatggt
gatccttccataagaaatgctgcatcattttctttaagatcaccacagtcggtatgctct
ccagctggaagtgatggaacccctaaaggatcaagaccacctttaatcctacaatctcag
cctccaccttattcatcacctagagatgtacccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagttctccttccaaggactccactaaacttacgtta
agactctctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcaatgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccattactccacaggatgttaaccgcccgctaaatgctgctcagtgtttg
ccacagcatgaacagacagcattccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacagcctcaaactcctgtggtacagacacagcaaccggtttca
cagcaaggaactattacgccatatgacgaagtagaattggatgcattggctgaaattgaa
cggatagaacgtgaatcagccattgaaagggagcgattttcaaaagaagtgcaagataaa
gataaacctttgaagaagcgaaaacaagattcttatccacaggaggctgggggtgctact
ggaggaaatagaccagcttctcaggagacaggttcagcaggaaatgggtcaaagccagca
ttgctggttagtattaatcttcagcaagcaggacgagtggattctcaggcaactgtaact
caggattcagataccatcaaaaaacctgaagaaataaaacagtgtaatgatggatctatt
tttgttcctcaagaagacactgttggggttcttaaactcaaacctgaaaaccatcctgag
acccttagaaaaaagttggattctgagggtcaaaaaacagatattcaacaaaatgaaaac
aaacagacagaagtacaacaaaatgagagcaagcggatggaaagtaaacacaatgaaagc
aaacagatagaagctaaacatgaaagcaagcatgagagcaagcagacagaggtgaaacaa
aatgaaagcagacagatggaagcaaagcaaaatgagggaaagcaaaacaatggcaaacag
gaaatacggcagaggcctgagacgccaaagcagaagaatgaaggcaggccggaaacgcca
aagcagaagaatgaaggcaggccagaaacaccaaagcagaagaatgaaggcaggccggaa
acgccaaagcagaagaatgaaggcaggccggaaacgccaaaacacagacatgacaatagg
agggactctggtaaaccatcctcggagaagaaatctgaaatatccaggcataaacaggat
gttaaatgtgatccctctagggtaaaatctgaaagtagatcagatccaacaaaacaaaga
cctgatggacgttcagttcctgagacaccaaggcgtgaccatgatagccttaaacaaaag
cctgaagacagaagtgaatcagaaagatacaggggagatccatctaagattagaagacct
gaatatttaagatcctcaaacaaaagtgaacatgattctaagcatggcattaagcctgat
agttcaaaaactgagaaactggaaagaaaacatagacatgagtctggcgagccaagagaa
aggctttcttctggggaacagaaatcacgacctgacagtcctcgtattaaacaggaaagc
aaaggagattccagtaaatcaagacctgataaacctggttttaaatcaccaaacagcaag
gatgaacgaaggacagagggtaataagagtaaagtagatagtaataaagcacatactgac
aataaagcagagtttcccagttatttgttggggggaagatctggtgcattgaaacatttt
gtaattcccaaaatcaagcgtgataaggatggcaatgtcactcaggagtcgaggaaaact
gaaattaagagtgaacataaggacaaagtagagaagattgggctagtcgaagatctgaat
aagggagccaagccagtagttgtccttcagaaactttctttggatgatgtacaaaaattt
attaaggatagagaagaaaaatcaaggagctcttgttttaaacctaataagaacaagtca
tccaaatcgaataaaggtagcatagatcagtcagtgttaaaggagttgcctcctgagctc
ctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaaacgcaag
cgtagcacagttaatgaaaaaccaaaatatgctgaaatcagttctgatgaagacaatgac
agtgaagaagcttttgaatcttctcggaaaagacataaaaaggacagagatgatgataaa
gcctgggagtacgaagagcatgatagaagaagttcaggtgatcataggaggagtggtcat
tatcacgaagggcgaaggacttctggtggtagccgctatcgcaatcgcagtccagaagac
tcggacatggatgattattctcctcctcctagcctcagtgaagtggctagaaaaatgaag
aaaaaagaaaagcaaaagaaaaggaaagcctatgaacctaaattaacccctgaagaaatg
atggattcttcaacttttaaacggtttactgcttcaatcgaaaatattttggaaaatttg
gaagacatggattttactgcctttggtgatgatgatgagattccacaggagttgctacta
ggaaaacatcagcttaatgaactggggagtgaatctgcgaaaattaaggcaatgggcata
atggacaagctgtcaacagataaaacagtgaaagtcctgaacatcttggaaaagaatatt
caagatggctcaaagctttcaacgttactaaatcataacaatgacactgaagatgaggaa
agattgtggagagatcttattatggagagagtcacaaaatctgctgatgcttgccttaca
gctatcaacattatgacatcacccaatatgcctaaagctgtatatattgaggatgtaata
gaaagagttattcagtacactaaatttcatctgcagaacacactttatcctcagtatgat
cctgtttacagggtggatcctcatggtggaggcgtgttaagttcaaaagcaaagcgtgcc
aagtgttccacccacaaacagagggttattgtgatgctgtataacaaagtttgtgacatt
gttagcagtttgtcagagttgctagagatacaactcctcactgatacaactattcttcag
gtatcatcaatggggataacacctttttttgtagaaaatgtcagtgaactccagttatgc
gccatcaaactagtgactgcagttttctcaaggtatgaaaaacatagacaactgatactg
gaagaaattttcacttcacttgcaagactaccaaccagcaagagaagtttgagaaatttc
aggttaaacagtagtgatgttgatggggagcctatgtatattcaaatggtgactgcactt
gttctacaacttattcaatgcgttgtgcacctaccatcagcagaaaaagattcaaattca
gaagaggagtcaaacaaaaaagtggatcaagatgtccttataactaactcttatgaaaca
gctatgagaactgcccagaacttcctttccattttccttaagaagtgtggtagtaagcaa
ggggaggaggattacaggccactgtttgagaactttattcaagatcttctttccacagtc
aacaaaccagaatggccagcagctgagttgctcctcagcttattaggaagactgttggtt
catcaattcagtaacaagtctacagaaatggctttgcgggtggcatcactcgattatctt
gggactgtagctgcaagattaaggaaggatgcagtctctagcaaaatggatcaaggatcc
attgcccgaatcttgaaacaggtttcaggagaggatgagatccaacagctgcaaaaggca
ttgctggattatttggatgaaaacacagagacagatgcatcattagtgttttccaggaag
ttttatatagcacagtggttccgtgacacaacaatggagacagagaaagcaatgaaatct
cagaaggatgatgaagcatctgaaggaactcaccatgccaaggatgttgaggcaacagga
caaataatgcacagagcagaaagtcgtaaaaaatttcttcgtaccatcattaaaactgca
ccatctcaattcagtacattaaagatgaattctgatactgtggactatgaagatgcttgc
ttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttatttg
acacagattctacgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaag
tgtttgtctgaggttgttgctgtagaccccagcattctagccaggctggatatgcagcga
ggtgttcatggacggttaatggataattccactagtgtacgagaagcagctgtggagttg
cttggccggtttgtgctctgtcgccctcagcttgctgaacagtattatgacatgctgatt
gagcgaatactggatactggtatcagtgtcagaaagagagtcataaagattttaagggac
atctgcattgaacaaccaacatttcccaagattacagagatgtgtgtgaaaatgattcga
agagtcaatgatgaagagggcattaagaaactggtgaacgagacattccagaagctctgg
tttactccaactccacacaatgacaaagaagccatgaccaggaaaatattaaacatcact
gatgtggttgcagcttgtagagatacaggatatgactggtttgaacaacttcttcaaaat
ctgttgaagtcagaagaggatgcttcatataaacctgtgaagaaagcctgtactcagctt
gttgataatctggttgagcacattcttaaatatgaggaatctctagcagactcggacaac
aaaggtgtgaattccggtcgcttggtagcttgcataaccactttgttcttattcagcaaa
atcaggccccagctaatggtcaaacatgccatgacaatgcagccataccttaccactaaa
tgtagtacacagaatgatttcatggtgatctgtaatgttgcaaaaatcttggagctggta
gtgccactaatggaacatcccagtgaaaccttccttgccactattgaggaagatctcatg
aaactcatcatcaaatatggcatgacagttgtgcaacactgtgtgagctgtcttggggct
gttgtaaacaaggttactcaaaattataaatttgtgtgggcttgttttaataggtactat
ggtgcactttcaaaattaaaaagtcaacaccaagaggacccaaacagtacaatacttaca
gccaataaaccagcactccttagatccctttttactgttggagcattatgtcggcatttt
gatttcgatcaggaagattttaagggtaacagtaaggttaacattaaggataaagtactt
gaactgctgatgtattttacaaaacattcagatgaagaggtacaaacaaaagccattatt
ggtctaggatttgcatttatacaacatccaagtctaatgtttgagcaggaagtgaagact
ctgtacaatagtattctttctgataagaactgctcagtaaacttaaaaatccaggtgtta
aaaaacctccaaacctacttgcaggaagaggatacacgtatgcagcaggcagatagagac
tggaagaaagtagccaaacaggaggatctgaaagaaatgggtgatatttcctcagggatg
agcagctccatcatgcagctatatcttaaacaggtccttgaggctttctttcatactcag
tccagtgtacgtcactttgctctaaatgtcattgcactgactttgaaccagggtcttatc
catcctgttcagtgtgttccatatttaattgcaatgggcacagatccagagccctctatg
cggaacaaagctgaccaacagctggtggaaatagacaaaaaatatgctggattcattcat
atgaaagcagtggctggtatgaagatgtcttacctggtacaacaggcaatcaatacatgc
ctaaaggatcctgtaaggggttttagacatgatgaatcctccagtgctttgtgttcacat
ttgtactccatgattcgagggaaccgtcaacatagacgagcctttcttatttctttactc
aacctcttcgatgacacggcaaaaacagaggtgaatatgctcttgtatatagcagacaat
ctagcctgttttccttatcaaacacaggaagagccactgtttataatgcatcatatagat
attacactgtcggtttctggtagtaacctactacagtcatttaaggagtctatggtaaag
acaaaaaaaaaggagagaaaaccgtcatcagatgaggagagtgagagtgacagtaacagt
gggagcgggagtgaaagtgaagaagaagttagcaagcctcgaaagttacggaaacgtgta
gactctgattcagattctgatgaagaaaatgatataaatgctgtgatgaaatgtttgcca
gaaaattcagctcctttaattgaatttgcaaatgtctcacaaggcatattactacttttg
atgctaaaacagcatttaaagaacctctgtggattctctgatagtaaaattcagaaatac
tctccatctgaatctgcaaaagtatatgataaagcgatcaaccggaagacaggtgtgcat
ttccatccaaaacagacgctggacttcctgcgaagcgatatggctcattctaagatcact
gaagaggtgaagaggagcatagtaaaacaatacttagatttcaagcttcttatggaacat
ttggatcctgatgaagaggaagaagatggggaggtgtcagctagcacaaatgctcgaaac
aaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagacagag
gacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaaggtca
aaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtcatg
gatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagtagta
cagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcctgg
actgaggctaagcgccgtgatggtcgcaaactggtgccttgggtagacactattaaagag
tcagacattatttacaaaaagattgctctaacgagtgctaataagctgactaataaagtt
gttcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa

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