Alligator mississippiensis (American alligator): 102559407
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Entry
102559407 CDS
T03087
Symbol
SPECC1L
Name
(RefSeq) sperm antigen with calponin homology and coiled-coil domains 1 like
KO
K23028
cytospin
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102559407 (SPECC1L)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
102559407 (SPECC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
ATG17_like
Prefoldin_2
ATG16
TMF_DNA_bd
CAMSAP_CH
Globin
Motif
Other DBs
NCBI-GeneID:
102559407
NCBI-ProteinID:
XP_006267028
LinkDB
All DBs
Position
Un
AA seq
1119 aa
AA seq
DB search
MKKASRSVGSAPKVPGINKTQTVEKVKPENGSSVSAVTKLSKTGTSTSLLKTKSNDDLLA
GMAGGGVTVTNGVKAKKSTCTSTVPSASGTTMNNLENKPKTITGTTSITKRSTSSGNKES
SSSRERIRDRSRLNQSKKLPLMGQGTNDTVLAKRSRSRTNPESDVRMSKSKSDNQISDKA
ALEAKVKDLLTLAKTKDVEILHLKNELRDMRAQLGLNEDQCESDEKTEEKEAVVVHQPTD
VESTLLQLQEQNTAIREELNQLKNENRMLKDRLNALGFSLEQRLDNSEKLFGYPSLSPEI
ATSNHSDGGGTLTSSVEGSAPGSMEDLLSQDENTLMDNQHSNSMDNLDSECSEVYQPLTS
SDDALDAPSSSESEGVPSIERSRKGSSGNASEVSVACLTERIHQMEENQHSTAEELQATL
QELADLQQITQELNSENERLGEEKVILMESLCQQSDKLEHFSRQIEYFRSLLDEHHISYV
IDEDMKSGRYMELEQRYMDLAENARFEREQLLGVQQHLSNTLKMAEQDNKEAQEMIGALK
ERNHHMERIVESEQKTKTALAANLDEYKATVASDQIEMNRLKAQLEHEKQKVAELYSIHN
SGDKSDIQDLLESVRLDKEKAETLASGLQEELAHTRNDANRLQDAIAKVEDEYRVFQEEA
KKQIEDLNMTLEKLRTELEEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENTV
KKLQDQKHDMEREIKNLHRRLREESAEWRQFQADLQTAVVIANDIKSEAQEEIGDLKRRL
HEAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPT
PTVKTLIKSFDSASQVPSPTTATIPRTPLSPSPMKTPPAAAVSPMQRHSISGPISTSKPL
TTLTDKRPSYAEIPVQEHLLRTSSTSRPASLPRVPAMESAKSISVSRRSSEEIKRDINAP
DGASPASLMAMGTTSPQLSLSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALL
KWCQKKTEGYQNIDITNFSSSWNDGLAFCAVLHTYLPAHIPYQELNSQDKRRNFTLAFQA
AESVGIKSTLDINEMVRTERPDWQNVMMYVTAIYKYFET
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaagcaggagtgttggctcagcgcccaaagtgcccggaataaataaaact
caaacagttgaaaaagtgaaaccagaaaacggctcctcagtgtctgcagtaacaaaactc
tcaaaaactgggacatcaacctctctgttgaagacaaaaagtaatgatgaccttttagct
gggatggctggtggtggggtgactgtgaccaatggtgtgaaagcaaagaagagcacctgc
acatctacagtgccttcagcttcagggaccaccatgaataacctggagaataaacccaag
actattacaggtacaacttccataaccaagcgtagcacttcatctggaaataaggaatct
agctcttctagagagagaatacgtgatcgttcccgtctaaaccagagcaaaaagctgcct
ttaatggggcaggggactaatgatacagtactggcaaaacgctctcgaagtcgtactaat
ccagaatctgatgttcgtatgagcaagtccaagtcggacaatcagatcagtgacaaagct
gctttagaagctaaagtgaaagatcttctgactttagcaaaaactaaagatgtagagatt
ttacacttaaagaatgaactcagagatatgcgtgctcaactgggccttaatgaagatcag
tgtgagagtgatgaaaagactgaggaaaaagaggctgttgttgttcaccagccaactgat
gtagagtctacattgctacagttacaagaacaaaacactgccatccgagaagagcttaat
cagttgaagaatgagaatcgaatgctaaaggaccgattaaatgctttgggcttttctttg
gagcaaaggctggataactctgaaaaactttttggttacccttctttgagcccagaaatt
gcaactagtaaccacagtgatggtggtggtactcttacatcttcagtggaaggttctgct
cctggatcaatggaagatttgttgagtcaggatgaaaacactttgatggataatcaacac
agtaactccatggataacttagacagtgaatgtagtgaagtttatcaaccacttacatca
agtgacgatgccttagatgctccctcatcttcagagtctgaaggtgtgccaagcatagaa
aggtctaggaaaggaagcagtggtaatgccagtgaagtgtctgtagcttgtctaacagaa
cgaatacaccagatggaagagaaccagcatagtacagctgaggagcttcaagcaacactt
caggaacttgcagatttacaacaaataactcaagaactgaatagtgaaaatgaaagactc
ggagaagaaaaggtaattcttatggagtccttatgccaacaaagtgacaagctagagcac
ttcagccgacagatcgagtattttcgttccctcttagatgaacaccacatctcttacgtt
attgatgaagatatgaagagtggacgctacatggaattagagcaacgttacatggacctt
gcagagaacgcccgttttgaacgagagcaactgctgggtgttcagcaacatctgagcaac
actctcaagatggcagaacaggataataaagaggcccaagaaatgataggtgcgctaaag
gaacgcaaccaccacatggagcgaattgttgagtcagagcaaaaaaccaagactgcacta
gcagccaacttggatgagtataaagctacagtagccagtgatcagattgagatgaacagg
ctaaaagctcagttggagcatgaaaagcaaaaagtggctgagttgtattccatacacaac
tctggggataaatcggatatacaagacttgctggagagtgtcagactggataaggaaaaa
gcagaaaccttggccagtggtctacaggaagagctagcacacactcgcaatgatgccaat
agattgcaggatgcaattgctaaggttgaagatgaatacagggtcttccaagaagaagcc
aagaagcaaattgaagatctcaatatgactctagaaaagcttcggacagagctagaagag
aaagagactgaaagaagcgacatgaaggaaacgatctttgagttagaagatgaagtagag
caacaccgagctgtgaaacttcatgacaatctcatcatatctgacttggaaaatacagtt
aaaaaacttcaggaccaaaagcatgatatggagagagaaataaagaatcttcacaggagg
ctccgggaagagtctgctgaatggcgccaattccaagctgatctacagactgcagtggtc
atagcaaatgatatcaaatctgaagcccaggaggagataggagacttaaagcgtaggctg
catgaagctcaggagaaaaatgagaagctcactaaggagctagaagaaataaaatctcgc
aagcaggaagaggaacgtggccgagtatacaattatatgaatgctgtagagagagatctg
gcagcgctcagacaaggaatggggctgagtcgcaggtcctccacctcctcagagccaact
cctactgtaaaaacactcatcaaatcctttgacagtgcctcacaagttccaagcccaacc
acagccacaattcctcgcaccccgctcagtccaagccccatgaaaacaccccctgcagct
gcagtttcccctatgcagaggcattctataagtggaccaatatcaacttccaaacccctt
actactctgacagacaaaagaccaagctacgcagaaatcccggttcaggaacatttgttg
aggacatcctctaccagcagaccagcctcgttgccaagagtacctgctatggaaagtgcc
aaatctatctcagtgtcacgacgaagcagcgaagaaatcaagcgagacattaatgcacct
gatggagcatctccagcctctctcatggcgatgggtaccacctcaccacaactttccctc
tcttcctctcccacagcatccgtcacccccacaacacgaagccgaataagggaagaaagg
aaagaccctttatctgccctggcaagagaatatggaggctccaaaagaaatgccttgctg
aagtggtgccagaagaaaacagaaggatatcagaacattgacatcacaaacttcagcagc
agctggaacgacggtttggccttctgtgcagtcctccatacttacctcccagcccacatt
ccctaccaagagctgaacagccaggacaagaggcggaatttcactctggcttttcaagct
gctgaaagtgttggcatcaagtccactctggacatcaatgaaatggtgcgaactgagcgt
cctgactggcagaatgtcatgatgtatgttacagcaatttacaaatactttgaaacctga
DBGET
integrated database retrieval system
