Alligator mississippiensis (American alligator): 102559698
Help
Entry
102559698 CDS
T03087
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102559698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102559698
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102559698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
102559698
NCBI-ProteinID:
XP_006263717
LinkDB
All DBs
Position
Un
AA seq
562 aa
AA seq
DB search
MATELEPPAAGAGPGAAPLEAEEDEEHWLYGDDTTGKQEDGPIAGHAESSHPLQDAPQES
RSVSNEDREMSQHALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAPGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPSPPISTENKITVQQGRTGNAEKEVENSIIKTEFKTDFVALVG
GRVKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERDRERERERERDRDRTPTTSEYNNDDERYRYYSRERSY
DFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKR
SKEEKETSEDGVPEGDEQDAKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgcccgcggcgggcgcggggccgggcgcggcgccgctggag
gcggaggaggacgaggagcactggctctacggggatgacaccactggtaagcaagaagat
ggaccaattgctggacatgcagaatcttctcatcctttgcaagatgcccctcaggagagc
cggtctgtcagcaatgaagaccgggagatgtcccagcacgcccttccaagtggtgaggat
gacgaggaagacagcgatagtgacagtgatgatgatgacgtgaaagttaccattggcaac
attaaaacaggagcaccatcctacatggggactccaatgaatctaaacctaaaaacgggt
agaggctatggagcatctgcttcagccaagttacagcccaaaggtattgatttggatgcc
ccagggaatataaatggattgcctgttatagaagtggatttagattcatttgaagacaaa
ccatggaggaaaccaggtgctgacctttctgattactttaattatggattcaatgaagaa
acttggaaagcttattgtgagaaacagcgacgacttcagcttggattggacccctcccct
cctatcagcacagagaataagatcacggttcagcaaggaaggacgggaaatgcagagaag
gaagtggagaacagcatcatcaaaacggaattcaaaactgactttgtggcactcgtagga
gggcgtgtgaaggctgggcctcccccaaacaggaagctgggtgggacgatcgacgtgatt
ggtggacaggcaggtacaattaggagagtagaaggaagacgtcgtgataaacatgcctcg
gaggaaaatcccattcaggtccttggagatcatggaaataagccacaacccccacagcag
ccccagcaaccatcacagcctcagcagccacctcagcagcagccatttgcaccaccagca
ggccccccaccacctccacttgctgggccaccaccaccacactttctgcaccctcctcct
ccagttacttctgtccctccacccctgcaccctccaggtttgccaccaccaggtcccatt
ccagggttgtttcctcccccactggctcctccaccagccctcctcattccaacacttgat
ggtcagccagccagctacaataacaggcaaccacctccgtttggctacaactctgcagat
tctggtttcatcagctacccgcccatctcaacgtcccacacaccctgggtgacaacagtg
gacaagggcacgagcagttccagtagcagccactgggaatactcgggctcaagacgtgag
agggaaagggaccgtgaacgcgagagagagcgggagagagaccgtgacaggactccgacc
acgagtgaatacaacaatgatgacgaacgatatcgctactacagtcgagaacggagctat
gactttgagcgggattaccgtcgcagccgagaccgcagccgggagcgggaggatcgccat
cgtgagcgccggcaccgagataaggaggagagcagcaaacacaagtcttcaagacgtaag
cagcatgaaagtgaagagggggaaagtcaccggcgccacaagcacaaaaagaacaagcgt
agcaaagaggagaaggagaccagtgaagatggtgtcccagagggggacgaacaggatgcc
aaggagtag
DBGET
integrated database retrieval system
