Alligator mississippiensis (American alligator): 102562427
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Entry
102562427 CDS
T03087
Symbol
THRA, THRB
Name
(RefSeq) thyroid hormone receptor, alpha
KO
K05547
thyroid hormone receptor alpha
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102562427 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102562427 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102562427 (THRA)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102562427 (THRA)
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
102562427 (THRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102562427
NCBI-ProteinID:
NP_001274207
UniProt:
Q0QFY7
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All DBs
Position
Un
AA seq
372 aa
AA seq
DB search
MSGYIPSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCI
IDKITRNQCQLCRFKKCISVGMAMDLVLDDSKRVAKRKLIEENRERRRKEEMIKSLQHRP
EPSAEEWELIHVVTEAHRSTNAQGSHWKQKRKFLPEDIGQSPMASMPDGDKVDLEAFSEF
TKIITPAITRVVDFAKKLPMFAELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSG
EMAVKREQLKNGGLGVVSDAIFDLGKSLSAFNLDDTEVALLQAVLLMSSDRTGLLCIDKI
EKSQETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFP
PLFLEVFEDQEV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtacatccctagttacctggacaaagatgaacaatgtgttgtgtgcggtgac
aaagctacagggtaccactaccgctgtatcacctgtgaaggctgcaagggctttttccga
cggaccatccagaagaacctgcaccccacctactcctgcaaatatgatggctgctgcatc
atcgacaagatcacccgcaaccagtgccagctgtgccgcttcaagaagtgcatctctgtg
ggcatggccatggacttggtgttggatgactccaagagggtagccaagaggaagctgatt
gaggagaaccgggagcggcggcgcaaggaggagatgatcaagtccctgcagcaccgcccg
gagcccagtgccgaggagtgggagctgatccacgtagtgactgaggcgcatcgcagcacc
aatgcccagggcagccactggaaacagaaacggaaattcctgcctgaagacattggccag
tctcccatggcttcaatgcctgatggggacaaggtcgacctggaagcattcagcgagttt
acaaaaatcatcaccccggccatcacccgcgtggtggactttgccaaaaaactgcccatg
tttgcggagctgccttgtgaagaccagatcatcctgctgaagggctgctgtatggagatc
atgtccctgagagcagcagtgcgctacgaccctgaaagcgagactctgacgctgagcggc
gagatggccgtcaagcgggagcagctgaagaatggtgggctgggtgtggtgtcagacgcc
atctttgacctgggcaagtcgctctctgccttcaacctggacgacactgaagttgcgctt
ctccaggcagtgttgctcatgtcctcagaccgcaccgggctgctctgcatcgacaagatt
gagaaaagccaagagacatacctgctggcgtttgaacactacatcaactatcgcaaacac
aacattccccacttctggcccaagctgctgatgaaggtgaccgacttgcgcatgattggt
gcctgccacgccagccgcttcctgcacatgaaggtggagtgccccactgagcttttccca
cccctcttcctcgaggtcttcgaggatcaggaagtctag
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