Alligator mississippiensis (American alligator): 102562662
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Entry
102562662 CDS
T03087
Symbol
NR1D1
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102562662 (NR1D1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102562662 (NR1D1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102562662 (NR1D1)
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1D. Rev-Erb
102562662 (NR1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102562662
NCBI-ProteinID:
XP_006270849
LinkDB
All DBs
Position
Un
AA seq
611 aa
AA seq
DB search
MAATDTNNNTGGVISYVGSSGSSPSRTSPVSLCSDSSNGSFQCGSQAFPSYFPPSPTGSL
IQDTRPYGGGVLGSREDGSPSSSSSSSSSSYGSSGTSPGGLQVAMDDGRRISPSKTTSSI
TKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIVRINR
NRCQQCRFKKCLLVGMSRDAVRFGRIPKREKQRMLAEMQSAMNNMANNQLSGQCLPDGSP
AGHPQPTNPLPCHQPQPQLPASPQQQQLLPPQPCFSQFPQQLTPPRSPSPGDAMEDVISQ
VAKAHKEIFVYAHDKLGTAPVPAWDNDALNRENDRCSNGYHASGLYRHDNNNLPHPDTPR
FSTWHASTPSACHQNNMNGHRLCPSAYPSSAQEAETLAGQGSRWQRGTKDILPACPMNMH
PPGRSGRTVQEIWEDFSLSFTPAVREVVEFAKHIPGFQDLSQHDQVALLKAGTFEVLMVR
FASLFNVKEQTVTFMSRTKYSLEELWGMGMGDLLNSMFEFSEKLSALELTDEELGLFTAV
VLVSADRSGMEDTALVEQLQETLIRALRALILKNRPTETSRFTKLLLKLPDLRTLNNLHS
EKLLSFRIDAQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacggacactaacaacaacacaggtggtgtgatcagctatgtgggctccagt
ggctcctctcccagccgtaccagtcctgtctccctgtgcagtgacagctccaacggcagc
ttccagtgtggctcgcaggctttcccctcctacttcccaccctcgccgactggctccctg
atccaggacacaaggccgtatggcgggggagtgctgggctcccgggaggatggttcccct
tcctcatcctcctcgtcctcctcttcctcgtatggctcttctgggacctcccctgggggc
ctgcaggttgccatggatgatggcaggcgcatctctcctagcaagaccaccagcagcatc
acaaagctgaacgggatggtcctgctttgcaaagtgtgcggagatgttgcctccgggttc
cactatggggtccatgcctgtgagggctgcaagggtttcttccgccgcagcatccagcag
aacatccagtacaagaagtgcctgaagaatgagaactgctccattgtccggatcaaccgg
aaccggtgtcagcagtgccgcttcaagaagtgtctcctggtcggcatgtcccgtgacgct
gtgcgctttgggcgcatccccaagcgcgagaagcagcgaatgctggcagagatgcagagt
gccatgaacaacatggccaacaaccaactgagcgggcagtgcctgcccgatggctcccct
gcagggcacccccagcccaccaaccccctgccctgccatcagccccagccgcagctcccc
gcctccccccagcagcagcagctgctgccgccgcagccctgcttctcccagttcccacag
cagctgacgcccccacgctcccccagccccggggacgcaatggaggacgtcatatcgcag
gtggctaaggcacacaaggaaatcttcgtttacgctcatgacaagctggggacagctccg
gtccctgcctgggacaatgatgccctcaaccgggagaacgaccgttgctccaatgggtac
cacgccagtggtctctatcgccacgacaacaacaacctaccccaccccgacacccctcgt
ttctccacctggcatgccagcacccccagtgcttgccaccagaacaacatgaatgggcat
cgcctctgcccttccgcctacccctcctctgcccaggaggccgagacgctggccggccag
ggcagccggtggcagagaggcaccaaggacatcctgccggcttgccccatgaacatgcac
ccacctggccggagtggccgcacagtgcaggagatctgggaagatttctccctcagcttc
acacccgccgtccgggaggtggtggagtttgccaagcacatcccaggcttccaggatctg
tcgcagcatgaccaagtcgccctcctcaaagccggcaccttcgaggtgctgatggtgcgt
tttgcctcgctgttcaacgtgaaggagcaaacggtgaccttcatgagccggacaaagtac
agcctggaggagctgtggggcatgggcatgggtgacctgctcaactccatgtttgagttc
agcgagaagctcagcgccctggagctcaccgatgaggagctgggcctcttcactgctgtt
gtgcttgtctctgctgaccgctccggcatggaggacacggcgctggtggagcagctgcag
gagacactgatccgtgccctgcgtgccctgattctgaagaaccgccccacagagacatcg
cgtttcaccaagctgctgctcaagctgcctgacctgcgcaccctcaacaacctgcactct
gagaagttgctctcctttcgcattgatgcccagtag
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