Alligator mississippiensis (American alligator): 102562730
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Entry
102562730 CDS
T03087
Symbol
TRPM3, TRPM1A
Name
(RefSeq) transient receptor potential cation channel subfamily M member 3
KO
K04978
transient receptor potential cation channel subfamily M member 3
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102562730 (TRPM3)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102562730 (TRPM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
102562730
NCBI-ProteinID:
XP_019333712
LinkDB
All DBs
Position
Un
AA seq
1705 aa
AA seq
DB search
MNTCMLTISTRRVAIYLAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPS
ISIIQNEKNESRLTRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDT
KPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGG
VNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGKDVVRPYQTMSNPMSKL
TVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALIVEGGPN
VISIVLEYLRDTPPVPVVICDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFT
YTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLAL
AWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLE
ELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTL
YHNLFGPKRPKALKLLGMEDDVPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVW
AVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQ
LAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWM
GRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYMTQANEIHLQEKEPEEPEKPVKEK
EEEDMELTANNMRCPQDPVCRQAEGPAYRTQYAGKRKDQSSRAAYRTHLQAMLGRGNGES
SRKKEEEEVQSRHRLIPLGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMDRWPS
TQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMVLRL
QDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLM
SFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKIIQLP
PCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHE
RPVLPPPLIIFSHMTMIFQHLCCRWRKHESDQDERDYGLKLFITEDELKKVHDFEEQCIE
EYFREKDDRFNSSNDERIRVTSERVENMAMRLEEVNEREHCMKASLQTVDIRLAQLEDMI
GRMATALEKLTGVEKGETTKVRSRTSSDCTDAAYIVRQSSFNSQEGNTYKLPESIDPAGE
ESMSPTSPTTVPRMRSHSFYAVNLKDKCGLDRLESMFKERSVSLHRASSSQSVSKETKIP
LIPTSTLSIAPDSRRPSSCIDIYVSAMDELQSGMEPLDSSVNILGTGDPALQAQIASSIL
ANSAYVSSTPGDRISGRSIDYEETSTMETRAFSADYSHITDSQNPWDSDPPLYHTLERSK
SSRYLATTPFILEETPIVKSHSFMFSPSRSYFSSLGVPVKTAEYTSITDCIDTRCVSAPQ
AIAERSSFPGTHGGKVDDLGCCHPEREAELSHPSSDNEETEVKDKKGSALSPQDSNTART
LTNSIPLPKIERANSYSADESNMLYAHTRKSYSISDKLDRQRNTTALRNPFQRSKSSRPE
SRGDTLSMRRLSRTGAFRSFETKHS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttgtatgctgacaatttctaccaggagagtggcgatttacctggctcagaaa
tcatggatagaaagagcattttacaagagagaatgtgttcacatcatacccagcaccaaa
gacccccataggtgttgctgtgggcgtctaataggtcaacatgttggactgactccaagt
atctccattattcagaatgagaaaaatgaaagcagactgactcgaaatgacatccagtca
gagaagtggtctatcagcaagcatactcagctcagcccaacagatgcctttggaaccatt
gagttccaaggagggggtcactccaataaagccatgtatgtacgtgtgtcctttgacaca
aagcctgatcttcttttgcacctcatgaccaaagagtggcagctagagctccccaagctt
ctcatttctgtgcatggaggccttcagaattttgaacttcagccaaaactcaagcaagtc
tttgggaaaggcctaattaaagctgccatgacaactggagcctggatattcactggagga
gtaaacacaggcgtcattcggcatgttggagatgcgttaaaagatcatgcctcaaaatct
cgagggaagatatgcactattggtatagccccctggggtattgtggaaaaccaggaagac
ctaattggcaaagatgtggtccgaccgtatcagacaatgtccaatcccatgagtaagctg
acagtactcaatagtatgcactcccattttattttggctgacaatggaacaacaggcaaa
tatggagcagaagtgaaactccgtagacaactggaaaagcacatctcacttcagaagata
aatactagaattggacagggagttccagtggtggcacttattgtggaaggaggtcccaat
gttatctctattgttttggagtacctacgagacactccacctgttcctgttgtgatatgt
gatggcagtggccgggcatctgacatccttgcatttggtcacaaatactctgaagaagga
gggcttatcaatgaatctttaagggaccagttactagttaccatccagaagacttttacc
tatactcggactcaggcacagcatctcttcatcatactcatggaatgcatgaagaagaag
gagttgattacagtgtttcgcatgggatcggagggacatcaggacattgatttagctatc
ctgacagcattactgaaaggagccaatgcatctgctccagaccaactgagcctagcctta
gcctggaatagagtagacatcgctcgcagtcagatctttatttatgggcaacagtggccg
gtagggtcccttgagcaagccatgctggatgccctggtgttggacagagtggattttgtg
aaattgctcatagagaatggagtaagcatgcatcgttttctcaccatctcccgactagag
gaattgtacaatacgagacatggaccatccaacactttgtatcatctagtcagggatgtc
aaaaagggaaatctacctccagattatagaataagtttgattgatattggactagtgatt
gaatatctgatgggaggggcttatcgctgcaactacacccgaaaacgattcagaaccctc
taccacaacttgtttggccccaagaggccaaaggccctgaaactgcttggaatggaggat
gatgtccctttgcgaagaggaaggaagacaactaagaaacgagaggaagaagtggatatt
gatttggatgatcctgaaattaaccattttcctttccccttccatgagttgatggtgtgg
gctgtcctgatgaagcgtcaaaagatggccctcttcttctggcagcatggggaggaggct
atggctaaagctttggtggcctgtaaactctgcaaagccatggcccacgaagcatcagaa
aatgacatggtggatgacatatctcaggagctgaaccacaattccagggattttggccag
ttggcggtagagctgttggaccaatcatacaagcaggatgaacaactggcaatgaaactg
ctgacctatgagctgaagaactggagcaatgccacctgcctgcagcttgctgtggcagcc
aagcaccgagatttcattgctcacacttgcagccaaatgctgctcactgacatgtggatg
ggccgacttcggatgcgcaaaaattcaggtctaaaggtaattctaggaattctacttcct
ccttcaattctcagcttggagttcaagaacaaagatgacatgccttacatgactcaagcc
aatgagatccatctacaagagaaggagccagaagaaccagagaaaccagtgaaagaaaag
gaagaggaggacatggaactcaccgcaaacaacatgcgctgcccccaggatcccgtctgc
aggcaggcagaaggacctgcctacaggacccaatatgcaggcaagcggaaggaccagtcc
tcacgagctgcctacaggacccatttgcaggcaatgttgggccgagggaatggagaatca
tccagaaaaaaggaggaagaggaagttcagagcaggcacaggctcatccccctcggaaga
aagatatacgagttctataatgcacccattgttaagttttggttctacacactggcatat
atcgggtatctgatgctgttcaactacattgtgttagtgaagatggatcgctggccttct
acacaggaatggatagtgatctcttatattttcacactgggaatagagaaaatgagagag
atattgatgtcagagcctgggaagctgttacagaaggtaaaggtgtggctccaggagtac
tggaatgtcacggatctcatagccattctcctgttctctgtggggatggtgcttcgcctg
caggatcaaccattccggagtgacgggagagtcatatactgcgtgaacatcatttactgg
tacatacgtttgttagacatcttcggagtgaacaagtatttgggaccatatgtgatgatg
attgggaaaatgatgatagacatgatgtattttgtcatcattatgttggtggttctgatg
agcttcggtgttgcaagacaggcaattctcttccccaatgaagagccttcatggaagctg
gcaaagaacatattttacatgccttattggatgatctatggggaagtgtttgcagaccag
atagaccctccttgtggccaaaatgaaaccagagaggatggcaaaataattcagctgcct
ccctgcaagacaggagcatggatcgttcctgccatcatggcatgttacctcttggttgca
aacatccttctggtgaaccttcttattgctgtctttaacaacacattttttgaggttaag
tctatatctaaccaagtctggaagtttcagaggtatcagctaatcatgacatttcatgaa
aggccggttcttccacctcctttgatcattttcagccacatgactatgatattccaacac
ctctgctgtagatggcgaaaacatgaaagtgaccaagatgagagagactatggactaaaa
cttttcataacggaagatgaattgaaaaaagttcatgattttgaagagcagtgcatagaa
gaatattttagagaaaaggatgatagatttaattcttccaatgatgaaagaatccgtgtc
acttctgaaagggtagagaatatggccatgaggttggaggaagtaaatgagcgagaacac
tgtatgaaagcttcacttcagactgtagacatcagacttgctcagttggaggatatgata
ggacgaatggctacagccctggagaagttgactggtgtggaaaaaggggagactaccaaa
gtacgatctagaacttcctcagactgtacagatgctgcttacattgtgagacagagcagc
ttcaatagccaggaagggaacacttacaagcttccggaaagtatagaccctgcaggagag
gagtcaatgtctccaacctctcctactactgttccccgcatgcgaagccactctttctat
gcggtgaatctgaaagacaaatgtgggttagacagattggaaagtatgtttaaagaaagg
tctgtgagcctgcatcgagctagtagctcgcagtctgtatcaaaagaaacaaagatacct
ttgatccctacaagcactttgtctattgccccagactccagaaggccttcatcttgcata
gacatttatgtttctgccatggatgaactgcagtctggtatggaacctcttgacagttca
gtaaatattcttggtactggagacccagctctgcaggctcaaatagcttcctccattcta
gcaaacagtgcgtatgttagcagtacacctggtgacagaatttctggcagaagtattgat
tatgaggaaacctctacaatggaaacaagagcattttctgcagattactcacacatcaca
gatagccaaaacccctgggactctgaccctcctttatatcataccttagagcgatctaaa
agcagtcgttacctggctacaaccccatttattctagaggaaaccccaattgtgaaatca
catagttttatgttctctccttctcggagctatttcagcagccttggggtgccagtcaaa
acagcagagtatacaagtattacagactgcatagacaccagatgtgtcagcgctccccag
gccatagcagaaaggtccagtttccctggaactcatggaggcaaagtggacgacttagga
tgctgccacccagagagagaagcagagctaagtcatccaagttcagataatgaggagact
gaggtcaaagacaagaaggggagtgccttatctcctcaggatagcaacactgcaagaact
ctaaccaacagcataccacttccaaaaatagagcgagccaacagctactctgcagatgag
tccaacatgctgtatgcacacacaaggaagagctactccatcagcgataaactcgatagg
cagcgtaacacaacagccttgagaaatccattccagaggagtaaatcatccaggccagaa
agtagaggggacaccctgtctatgagaagactgtccagaacaggcgctttccgtagtttt
gagactaagcacagctaa
DBGET
integrated database retrieval system
