Alligator mississippiensis (American alligator): 102563680
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Entry
102563680 CDS
T03087
Symbol
TRPM5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102563680 (TRPM5)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102563680 (TRPM5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
102563680
NCBI-ProteinID:
XP_006271260
LinkDB
All DBs
Position
Un
AA seq
1176 aa
AA seq
DB search
MTLMEDTGAKHCGNDKEDVLRKELPYCTGEIDFIAAGKKRGKFVKVPCTIHPGVIFDVMI
NKWKLSAPNLVVSLVGEEEDFQMKPWLRDTLRKGLVKAAQSTGAWIFTSALRVGITRHIG
QAVRDHALASTSSKVKVIAIGITSLEKIQHREILDSAKNDSPVHYKSDDNSQGPLYSLDN
NHSHFILVDQIDPDEPDGTTKLRLTLEKHISEQRTGYGGTGSIEIPVLCLLVNGGPNTLE
RICRGLENSAPWLILAGSGGTADILAALVNEPQLIVPQVVKKQFKEKFPSENFLWKDIRQ
WTATIQNIISQQHLLTVHDFEQEGSEELDTVILKALVKACKSHSQEAQEYLDELKLAVAW
NRVDIAKSEIFNGDVEWKSCDLEEVMMDALVNDKPEFVKLFIDNGANMYDFLTYSRLQRL
YCSISQKSLLYSLLLKKHEESKLTLAGLSGQQHREVKETCPLFTLNEVSRVLKDFLHDAC
KGFYQEAKQGSKKKYDKTNAKRLLGLLDMNQKSENPWRDLFLWAVLQNRHKMAKFFWATG
QEGVAAALAACKIVKEMSRLETETEVARIMKEAKYEQLAVELFSECYHNSEDRAFALLVR
RNQYWSKTTCLHLATEADAKTFFAHDGVQAFLTKIWWGDMSTSTQILKLICGFWCPLLIY
TNVIAFSEEKQSKNEPEPFRELDSLDTERTLLFSMEGDRGDGILEKQSPSENVAWATFMF
TRWEKFWTAPVTVFMGNVIMYFAFLFLFTYVLLLDFKPPPPEGPSANEIILYFWVFTLVL
EEIRQSFFTDEDTNLMKKFKLYVEDNWNKCDMVTIFLFIIGVTCRMLNSTFQAGRTILAI
DFMVFALRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVTTQALLHPDDS
RVEWIFRRVLYRPYLQIFGQIPLDEIDTSRMRSGNCSFNPLKIMQENSPSCPNSYANWLV
ILLLVIFLLVTNVLLMNLLIAMFSYTFQVVQGNADIFWKFQRYNLIVEYHGRPALAPPFI
IISHMNMILRRIFKKTEHKKEHLERDLPDGLDQKIITWELVQKENYLANLEQMTKESNEE
RLKKTSNKVDSLSNYFSGLKEQEKRFKSLESQINYCTLVISSMADTLTKSNLLSNTLTPS
YTSLTNTDINQIPLLARNEGDEHAEQFESDIMYIDS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatggaggacacaggagcaaaacattgtggtaacgacaaggaagatgtactt
agaaaggaactgccatactgcacaggagaaattgacttcatagcagctggaaagaaacgt
ggaaagtttgtcaaggttccatgtaccatccatcctggagttatattcgatgtcatgatc
aacaagtggaagctatctgctcccaatttagttgtgtctctagttggagaggaagaagac
tttcagatgaaaccttggttgcgggacaccttaagaaaaggactcgtaaaggcagctcaa
agcacaggtgcctggatctttaccagtgctttacgtgttggaataacaagacacataggg
caagcagttagagatcatgcattggctagtacttcatccaaagtaaaagtgattgcaatt
ggaataacctcactggaaaaaattcagcacagagaaattctggacagtgcaaagaatgac
agtcctgtacactataaatcagatgataacagccaaggaccactgtattcccttgacaac
aatcactcccattttattttggtggatcagatagacccagatgagccagatggaacaact
aaactacggctcaccttggagaaacatatttcagaacagcgcactgggtacggaggaaca
ggtagcattgaaatccctgtgctttgtttactagtaaacggaggaccaaatacacttgag
agaatttgcaggggcttggaaaactctgctccctggctcatcttagcaggatctgggggg
acagctgacatcttagctgcattagtgaatgagccgcagcttattgtgccacaagtggtc
aaaaagcagttcaaagaaaaatttccttcagagaactttttatggaaagatattcgccag
tggacagcaacaattcagaacattatttcccagcaacatcttttaacagttcatgacttt
gagcaagaaggttcagaagaattagacacagtcattttgaaagctttggttaaagcctgt
aaaagccacagtcaggaagcccaggaatatctggatgaactgaagctggcggtggcatgg
aatagagtggacatagctaaaagtgaaatattcaatggagatgtggaatggaagtcctgt
gacctggaggaggtgatgatggatgctctggtgaatgataaaccagaatttgtcaagtta
tttatcgacaacggggccaacatgtacgacttcctcacatatagccggcttcagaggctc
tactgctccatttctcagaaaagtctcctctactcacttctgctgaagaagcatgaggaa
agcaaattgactttggcaggactcagtgggcaacaacacagagaagtgaaggagacctgc
ccactctttaccctcaatgaagtttctagagttctcaaagactttcttcatgatgcctgc
aaaggtttctaccaagaagccaagcaaggaagcaagaagaaatatgataaaacaaatgca
aaacgactactggggctcctggatatgaatcagaaaagtgagaatccttggagggattta
tttttatgggcagtacttcaaaaccgccacaagatggcaaagttcttctgggctacggga
caggaaggtgtagctgcagctttggcagcttgtaagattgttaaagagatgtcccgactg
gagacagagaccgaagtagctcgtataatgaaagaggctaagtatgagcagctcgctgtg
gagctattcagcgaatgttatcacaacagcgaagaccgagcttttgctttactggtgaga
agaaaccagtactggagcaaaaccacatgcctccacttagctacagaagcagatgccaag
actttttttgcacatgatggtgtccaggctttcttgacaaaaatatggtggggagacatg
tcaacaagcacacagatcttgaagttaatctgtggattctggtgtcctcttttaatctac
acaaatgtaatagcattcagtgaagaaaaacaatcaaagaatgagccagagccatttaga
gagctggacagcctagacacagaaagaactttgcttttttccatggagggagatagggga
gatggtatattggagaagcagagtccttctgaaaatgtagcgtgggcaacgttcatgttt
acacgatgggaaaaattttggactgcccctgtgacagtatttatggggaatgtgatcatg
tattttgcttttctgtttctatttacttatgtccttttactggacttcaagccacccccc
cctgaggggccatctgccaacgagattatactttacttctgggttttcacattggttctg
gaagaaatccgacagagcttctttacagatgaagataccaatttaatgaagaagttcaag
ctatatgtagaagataattggaacaagtgtgatatggtgaccatctttctgtttataatt
ggagtgacctgcagaatgctgaactcaacgtttcaagctggccgtacaatacttgctatt
gatttcatggtatttgcacttaggcttatacatatttttgctattcacaagcaactgggg
ccaaagatcataattgtggaaagaatgatgaaggatgttttcttctttctctttttcctg
agcgtgtggctcattgcctatggtgtgacaactcaagccttgcttcatcctgatgacagc
cgagtagaatggatattcagaagggtgctctatcgtccttaccttcagatatttgggcag
attccactggatgaaatagacacatctcgtatgcgctctgggaactgttcatttaaccca
ctgaagattatgcaggagaattcaccatcatgtcctaatagctatgccaactggctggtc
atattgctcttggtcattttcttgctagtcaccaatgtgctccttatgaatctactgatt
gctatgttcagttacacttttcaagttgttcaaggcaatgcagacatcttctggaaattt
cagcgttacaacctgattgtcgaataccatggacgacctgccttagccccaccatttatc
atcattagccacatgaatatgattcttagaagaatctttaaaaagacagaacacaagaag
gaacatctggaaagagatctgccagatggcctggatcaaaaaatcataacgtgggaactg
gtacaaaaagaaaactatcttgcaaacttggaacaaatgacaaaagaaagcaatgaagaa
aggctaaagaaaacctctaacaaggtggacagtctgtccaactattttagtggattgaaa
gagcaagagaagcggttcaaatctctggaatcacagattaactactgtacgctcgttatt
tcttcaatggcagacactttaaccaaaagtaacctactgagcaacacgctgactccaagc
tatacaagtttgacgaataccgacattaatcaaatacccctactggcgagaaatgaaggt
gacgagcatgcagaacagtttgaaagtgacataatgtacatcgatagctaa
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