Alligator mississippiensis (American alligator): 102563993
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Entry
102563993 CDS
T03087
Symbol
ZNFX1
Name
(RefSeq) zinc finger NFX1-type containing 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102563993 (ZNFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
SLFN-g3_helicase
ResIII
UvrD-helicase
DEAD
PhoH
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
102563993
NCBI-ProteinID:
XP_014459758
LinkDB
All DBs
Position
Un
AA seq
1800 aa
AA seq
DB search
PAPAPAPARPELRFLLRHEPREQPQPQAQAGLRRIGYKFLESLLHRDASEVVITLVSSSG
LRELLAQVAMKPSFLELLCQVLRKACSSRMDRQSVQQLLGLVKESNFLKVCLPQYAADMM
TEPAPALRQQYAGHVGNIIALLQDLVSIFPASSVQNISVLMSILPASINVLRASGVDIAE
QTERSLEKVQALIQHLQEKKREGTLRTDSYTLLQPQPGGQEDSYRAMTVYPTYNEVHRDE
KPFLRPNIVSGRYESTGVYLDTHFRLLREDFVRPLREGILELLQSFEDKGLRKRRFDDIR
IYFDMRIITPLCSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDHFETFLFATV
SNRDSTDLAKGIVQLCFTGHSQALLAEAQPSDSFLMVETTAYFEAYRHVLEGLQEVQEED
VPFQKYIVECDTLVGEPAYLRMGSTYNLAPLMEEPSPDGERGLASPEGLRRQRVNVLDPS
QWPSMEALKLDESQMQALQLALTKELAIIQGPPGTGKTYVGLKIVQAFLTNEQVWQKSPI
LVVCYTNHALDQFLEGIYKSQKNGIVRVGGRSSSEVLKQFTLRELRKKCDFRRNLPPHLR
RAYVDITNQMKHSEQELREGARHLECTTYGVLHERHLERYISPQHWDSLTNGPEDEWFYC
FGSRHSMILEWLGLGVNTFTQNTAENPGPETTGGQQEGEEEEEGEVQEELLEIEEEADLI
QADRVIEEEEAARPQRRKEEENGAVMELANRLLAMKLEKQGLGAAQPQQEGEWEMQPAQR
KKMKHKMKVELHKLSTMTEKQAEAIQDLWQLDLGSRWQLYRLWLQMYQGDIRRQILQHER
QYQVAAERLAELRLQEDLCILKEAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEA
HTITTLSKACQHLVLIGDHQQLRPSANVYDLAKNFNLEMSLFERLVKVGLPFVRLNYQHR
MRPEIAQLLTPHIYQELENHPSVLTYENIKGVASNLFFVEHDFPEEEIQEGKSHQNPHEA
KFVVELCKYFLCQDYLPSQITILTTYTGQLFCLRRLMPAKTFAGVKVHVVDKYQGEENDI
ILLSLVRSNREERAGFLQISNRICVALSRAKKGLYCIGNMGMLGKVPLWSKIIHTLREKG
RIGRSLILCCQNHPDTRTLVSKAADFCQVPEGGCSRPCEFRLSCGHVCTRACHPYDIQHK
EFQCLKPCQKVLCKDGHRCPHLCSEPCEECMVKVPKTIPKCGHPQMVPCSTPASEFCCQE
PCQKYLTCGHKCNKLCGQECTAQCPELVMVTLKCGHDQQVKCWITEEMENGMPVKCKTKC
VTTLDCGHVCPGSCNTCYEGRFHEQCKNPCKRFLVCSHKCQQPCTGECPPCQQACQNHCV
HSQCKKKCGEMCIPCMEPCEWRCQHYQCTQLCSEPCNRPRCDVRCSKKLRCGHPCIGLCG
EPCPKKCLVCDHDEVTQIFFGFEEDPEACFVQLEDCGHIFESQGLDYYMDEDESAVKLKV
CPICQTPIRKNLRYGTIVKKRLEEIEKVKEKIQGPAREIETSRHRLQATLEGKAVLRRVL
PTKYDRLEDRLKQPNLSTKSVGLLENLINFYERVADLTGSLSKLDPSEREVLRKRLAEVQ
EWLSKQRLSFSSQELSDLQSEMQRVTYLANLLTRCSAAGTRLSAALAQDVAALRTLLQRT
GRFTAEDEAAVRVKMEELKAALPTSGLGISEEERVQIVSAIGCPRGHWFKCRNGHVYVIG
ECGGAMEQGVCPECQAVIGGHNHALDDSNRLAPEMDGAAHAAWSDTANNLLNFEELGRLL
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
ccggccccggccccggctccggcccgcccggagctccgcttcctcctgcgccacgagccc
cgcgagcagccgcagccgcaggcgcaggccgggctgcggcgcatcggctacaagttcctg
gagagcctcctgcacagagacgcgtcggaggtggtcatcacgctggtgtccagctcgggg
ctgcgggagctgctggcgcaggtggccatgaagcccagcttcctggagctgctgtgccag
gtgctgcgcaaggcgtgcagctcccgcatggaccggcagagcgtgcagcagctgctgggg
ctggtcaaggagtccaacttcctcaaggtctgcctgccgcagtacgcggccgacatgatg
acggagccggcgcccgccctgcggcagcagtacgcggggcacgtcggcaacatcatcgcg
ctcctccaggacctggtgagcatcttcccggccagctccgtgcagaacatctccgtgctg
atgtccatcctgccggcctccatcaacgtgctgagagcctccggcgtggacatcgcggag
cagacggagaggagcttggagaaggtccaggccctgatccagcacctgcaggagaagaag
cgcgagggcaccctgcggaccgacagctacacgctgctgcagccccagcctggcgggcag
gaggactcctaccgcgccatgaccgtctaccccacctacaacgaggtgcaccgggacgag
aagccctttcttcgccccaacatcgtgtctgggaggtacgagagcaccggcgtttacctg
gacacgcatttccggctcctgagagaggacttcgtcaggcctctgagggaaggcatcctg
gagcttctgcagagcttcgaagacaaaggcttgaggaagaggaggtttgatgacatcagg
atctacttcgacatgcggatcatcactccgctctgctcctcctccggcatcgtctacaag
gtccagtttgacaccaagccgctgaagttcgtgcggtggcagaactccaagcgcctgctc
tacggctccctggtctgcatgtccaaagaccacttcgaaaccttcctctttgccacggtg
tcgaaccgtgacagcaccgacctggccaagggcatcgtgcagctgtgcttcaccgggcac
agccaggcgctgctggcagaggcccagccctcggactcctttctcatggtggagacgaca
gcctacttcgaagcctaccggcacgtgctggaggggctgcaggaggtccaggaagaagac
gtcccttttcagaagtacatcgtggagtgcgacaccctcgtgggagagccggcgtacctg
agaatgggcagcacctacaacctcgcacctctgatggaggagccctccccagatggagag
aggggcctggccagccccgagggcttgaggagacagagggtgaacgttctcgaccccagc
cagtggccttccatggaagccttgaagctggacgagtcgcagatgcaggccttgcagctg
gcactcaccaaggagctggccattatccaggggcctcctggaactgggaagacctatgtg
ggtttgaagatcgtccaggctttcctgaccaacgagcaggtgtggcagaagtctcccatc
ctcgtggtctgctacaccaaccatgccctggaccagttcctggaagggatctacaagtcc
cagaagaacgggatcgtgcgcgtggggggcagaagcagcagcgaggtcctgaagcagttc
acgctgcgggagctgaggaaaaagtgtgacttccgccgcaatctaccgccgcacctgcgc
agggcctacgtggacatcacgaaccagatgaagcattcggagcaggagctgcgcgaggga
gccaggcacctggagtgcacaacgtacggcgtgctgcacgaacgccacctggagagatac
atctccccgcagcactgggacagcctgaccaacgggccggaggacgagtggttttactgc
ttcggttcaaggcactcgatgattttggaatggctgggccttggtgtcaataccttcacc
cagaatactgcagagaacccagggcctgaaaccacaggtggccagcaggagggggaagag
gaggaggagggagaggtacaagaggagctgctggagattgaagaggaagctgacctgatc
caggcagaccgagtgatcgaggaagaggaggcagcccggccccagcggaggaaggaagaa
gaaaatggggcagtcatggaactggccaatcgcctgctggccatgaagctggagaaacag
ggcctgggagcagcccagccacagcaggaaggagagtgggagatgcagccagctcagagg
aagaaaatgaaacataagatgaaggttgaacttcataagctgagcacgatgacggagaag
caggctgaggctatccaggatctgtggcagctggaccttggctcccgctggcagctctac
aggctctggctgcagatgtaccagggtgatatccggcggcaaatcctgcagcacgagcgg
cagtaccaggtggcagcggagcggctggcagagctgcggctgcaggaggacctgtgcatc
ctcaaggaggcccaggttgtgggcatgacaaccacaggtgctgccaagtaccgccagatt
ttgcagaaagtggaacctcgaattgtcatagtggaagaggcggcagaggtgctggaggct
catacaatcaccacgctgagcaaagcctgccagcaccttgtcctcatcggagaccaccag
cagctgcggccgagcgccaatgtgtacgacttggccaagaacttcaatctggagatgtcc
ctcttcgagcggctggtgaaggttggcctcccctttgttcgcctgaattaccagcaccgc
atgcgccctgagattgcccagctccttactcctcacatataccaggagctggagaaccac
ccctcggtcctcacctatgagaacatcaagggggttgcatctaacctcttctttgtggag
catgacttccctgaagaggaaatccaggaagggaaaagccatcagaacccacacgaggcc
aaattcgtggtggagctatgcaagtacttcctgtgccaggactacctgccctctcagatc
accatcctcaccacctacactgggcagcttttctgtttgcgcaggctcatgcctgccaaa
acctttgcaggtgtgaaagttcacgtggtggataagtaccagggtgaggagaacgacatt
atcttgctttcacttgtgcgaagtaacagggaagagagagctggattcctgcagatttcc
aaccggatctgcgtggcattatccagagccaagaaagggctgtactgcattgggaacatg
gggatgctcggcaaggtccccctctggagcaagatcattcacactctccgagagaaaggt
cggatcggccgctcgctgatactgtgctgccagaaccaccctgacactcggaccctggtg
tccaaagcagcagacttctgccaagttccagaagggggttgcagccgcccctgtgagttc
aggctgagttgcggacacgtctgcactcgggcatgtcacccctatgacatccagcacaag
gagtttcagtgtctgaagccctgccagaaggtgctctgcaaagatgggcaccgttgcccc
catttgtgctctgaaccctgtgaagaatgcatggtgaaagtgccgaaaactatccccaaa
tgcggccacccacagatggttccttgctccacccctgcaagtgagttttgttgtcaagag
ccttgtcagaagtatctgacatgtgggcacaaatgtaacaagctctgtgggcaggaatgc
actgcgcagtgtcctgagctggtgatggtcacattaaaatgtggccacgaccagcaggtg
aaatgctggatcacggaagagatggaaaatgggatgcctgtgaagtgtaaaacgaaatgt
gtgaccacgctggactgtggccatgtctgcccgggctcctgcaacacctgctatgaaggg
cgatttcacgagcagtgcaagaacccctgcaagcgcttcctcgtttgctcccacaagtgt
cagcaaccttgcactggggagtgccctccctgccagcaagcatgtcagaaccactgcgtc
cacagtcagtgtaaaaagaaatgtggggagatgtgtatcccatgcatggagccatgcgag
tggcggtgccagcactaccagtgcacgcagctttgctcagagccatgcaacaggccccgc
tgtgatgtacggtgcagtaagaagctgcgctgtggtcatccctgcatcgggctgtgcggg
gaaccctgccccaaaaagtgccttgtgtgtgaccacgatgaagtcactcagatatttttt
ggctttgaggaggatccggaagcctgctttgtgcagctggaagactgcggccacatcttt
gagtcccaaggtctcgactattacatggacgaagacgaaagtgccgtcaagctgaaggtg
tgtcccatctgccagacgccaattagaaagaacttgagatacggcaccattgtgaaaaag
cggctggaggagatcgagaaggtgaaggagaaaatccaaggcccagcgcgtgaaattgaa
acgagcaggcacaggctgcaggccacgctggaagggaaggccgttctgcggagggtgctg
cctaccaagtacgaccggctggaggacaggctgaagcagcccaacctctccacgaagagc
gtcgggctcctggagaacctgatcaacttctacgagcgcgtggcggacctgaccgggtcc
ctgagcaagctggacccgagcgagcgggaggtgctgaggaagcggctggcggaggtgcag
gagtggctcagcaagcagcggctcagcttcagcagccaggagctgtcggacctgcagagc
gagatgcagcgggtgacgtacctggccaacctcctgacccgctgcagcgccgccggcacg
cggctcagcgccgcgctggcccaggacgtcgccgccctgcgcacgctgctgcagcgcacc
gggaggttcacggcggaggacgaggcggcggtgcgggtgaagatggaggagctgaaggcc
gcgctgcccacgtcggggctgggcatctcggaggaggagcgggtgcagatcgtcagcgcc
atcggctgcccgcgcggccactggttcaagtgcaggaacgggcacgtgtacgtgatcggg
gagtgcggcggggccatggagcagggcgtctgccccgagtgccaggccgtcatcggcggc
cacaaccacgcgctggacgactccaaccgcctggcgcccgagatggacggcgccgcgcac
gccgcctggtccgacacggccaacaacctgctcaacttcgaggagctcggccgcctgctc
tag
DBGET
integrated database retrieval system
