Alligator mississippiensis (American alligator): 102565587
Help
Entry
102565587 CDS
T03087
Symbol
KHSRP
Name
(RefSeq) KH-type splicing regulatory protein
KO
K13210
far upstream element-binding protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102565587 (KHSRP)
03041 Spliceosome [BR:
amj03041
]
102565587 (KHSRP)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102565587 (KHSRP)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102565587 (KHSRP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
DUF1897
KhpA-B_KH
Motif
Other DBs
NCBI-GeneID:
102565587
NCBI-ProteinID:
XP_019341706
LinkDB
All DBs
Position
Un
AA seq
648 aa
AA seq
DB search
PPGGIRKDAFADAVQRARQIAAKIGGDTATTVNNNTPDFGFGGQKRQLEDGDQPESKKLA
AQTDSLSTQLGPIHPPPRSTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS
GGLPERSVSLTGSPEAVQKAKMMLDDIVSRGRGGPPGQFHDNANGQNGTVQEIMIPAGKA
GLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE
RDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTG
PEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGPGMPPGGRGRGRGQGNWGPPGGE
MTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDH
AKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYP
PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGQPPAPAAPPV
QGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVATGG
GPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPAPPPTQQGQQAQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ccgcccggcggcatccgcaaggacgccttcgccgacgccgtgcagcgggcccggcagatt
gcagcaaaaatcgggggagatacagctacaacggtgaacaacaacactccagactttggg
tttgggggtcagaagagacaactggaagatggagaccagccggagagcaagaagctggct
gcccagacggactcactatccacgcagctgggaccgatccatcctcctcccaggtcgact
gttactgaagagtacagagtgcctgatggcatggtgggactcatcattggcagaggagga
gaacaaatcaacaaaatccagcaggactctggctgcaaagtacagatctcgccagacagc
ggtggtctgccggagcggagcgtctccctgaccgggtctccagaagctgttcagaaggcg
aagatgatgctggatgacatcgtgtcgcggggccgtggtgggcccccgggccagttccac
gacaacgccaatgggcagaacggcacagtgcaggagattatgatcccggctgggaaggca
gggctggttattggcaagggtggggagaccattaagcaattgcaggaaagagctggagta
aaaatgattctgattcaagacggttcccagaacaccaacgtggacaaacccttgaggata
attggggatccttacaaagtgcagcaagcctgtgagatggtgatggacatcttacgggag
cgtgaccagggtggctttggtgaccgaaatgaatacggttccaggattgggggaggaata
gatgttccagtgcccagacactctgtgggtgtggttattggccgcagtggggagatgatc
aagaaaatacaaaatgatgctggagttcggatacaatttaagcaagatgacgggactgga
cctgagaagattgcccatatcatgggtcccccagaccggtgtgagcatgctgcccgcatc
atcaatgatcttctccagagtctccggagcggcccaccaggcccccctggcccagggatg
ccccctgggggcagaggacgaggacgagggcagggcaactggggccccccaggtggggag
atgaccttctccatcccaacgcacaagtgtgggctggtcattggcagaggtggggagaat
gtcaaagccataaaccagcagacgggggcatttgtggagatctcacggcagctgcctccc
aatggtgaccccaacttcaagctgttcatcatccgagggtccccacagcagattgatcac
gccaagcagctcatcgaggagaagatagagggtcctttgtgcccagttggaccaggacca
gggcctggggggccaccaggacctgctggccccatggggcctttcaacccaggaccgttc
aatcagggccctccaggagcccctcctcaccctggcggtcctcctcctcaccagtaccca
ccccagggctgggggaacacctacccgcagtggcagccacctgcacctcatgacccaagc
aaagcagcagcggctgcagcggatcccaatgcggcctgggcagcctactactcgcactat
taccagcagcccccgggccccgtgcctgggcagccaccggcgcctgcagccccgcctgtg
cagggagaacccccacagccgcccccaactggccagtcagactacactaaagcctgggag
gagtattacaaaaaaataggccaacagccccagcagccgggggcacccccacaacaggat
tacacaaaagcctgggaggaatattacaagaagcaagcagctcaagtggctactggagga
ggtcctggagccccacccggcccccagccggactacagtgcggcctgggcagagtactac
agacagcaagcagcctactacggacagacgccaggggccgcgggcccagccccaccgccc
acacagcagggacagcaggcccagtga
DBGET
integrated database retrieval system
