Alligator mississippiensis (American alligator): 102565796
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Entry
102565796 CDS
T03087
Symbol
LUM
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
102565796 (LUM)
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
102565796 (LUM)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
102565796
NCBI-ProteinID:
XP_006258420
LinkDB
All DBs
Position
Un
AA seq
342 aa
AA seq
DB search
MHLNSVPFFLVLISGIFCQYDYNPDDYGYERYVPSSSLCAPECDCPINYPTAMYCDNLKL
KSFPIVPSGIKYLYIRNNMIEGIEENAFENVTDLQWLILDNNHLENSKIKGKVFAKLKNL
KKLHINYNNLTEVVGPLPKTLDELQLSHNKISKVSPNVLEGLMNLTVIHLQNNQLKGDVL
SGAFRGLNSLLYLDLSFNQITKLPTGLPRSLLMLYFDNNLISNVPDEFFQGFKVLQYLRL
SHNKLEDSGIPGNVFNISSLVELDLSFNNLKSIPTVSENLENFYLQVNKINKFPLSSFCK
VVGPATYSKITHLRLDGNNLTRADLPHEMYNCLRVATEISLE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaactccgtgcctttctttctggtattgatcagtggaattttctgtcaatat
gactataatccagatgactatggttatgagcgctatgtgccatcttcatcactctgtgcc
ccagaatgtgactgtcctataaactacccaactgcaatgtactgtgataatcttaaacta
aaaagttttccaattgtaccctctggaataaaatacctatatatccgaaacaatatgatt
gagggcattgaagaaaatgcatttgagaatgtaacagatctacagtggctgatcctagat
aataaccatttggaaaactcaaaaattaagggaaaagtctttgctaaactgaagaattta
aagaaactgcatataaattataacaacttgactgaagttgttggaccacttcccaaaacc
ctggatgaactgcaacttagtcacaacaagatctcaaaagtcagccccaatgtactagaa
ggacttatgaacctgactgtcattcacctacagaacaaccagctgaaaggagatgttctt
tctggggcttttagaggcctgaattctcttctgtatctagacctgagcttcaatcaaatt
acaaagctaccaacaggactgcctcgctccttactcatgctatattttgacaacaacctg
atcagcaatgttcctgatgagttcttccagggttttaaagtcctgcagtatttacgtttg
tctcacaataagttggaagattctggaataccaggcaatgttttcaatatctcctcacta
gtcgaactggatctctcctttaacaacctgaagagtattccaacagtcagtgaaaacctt
gaaaacttctacctccaagtcaacaaaattaacaagtttccactgagcagcttttgtaaa
gttgttggaccagcaacctattccaagataacacatttgcgcttggatggaaataatctc
actcgagctgacctaccacatgaaatgtacaactgtctccgtgtagctacagagatctca
ctggagtga
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