Alligator mississippiensis (American alligator): 102566000
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Entry
102566000 CDS
T03087
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM11
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102566000
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102566000
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102566000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-Nse
DUF6504
Sina_RING
U-box
THF_DHG_CYH
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
102566000
NCBI-ProteinID:
XP_006273203
LinkDB
All DBs
Position
Un
AA seq
694 aa
AA seq
DB search
MATRNPVENLQDDTTCFICLEFFKDPVMIMGCGHSFCQACISQCWEGKEKDVSCPQCRLT
FPQRNLCPNRLLANFVSIAKQLKAPAANEAEEQWMCKKHGEALKLFCDEDQILLCVVCER
SQAHQAHTVVPIKEAAREHKEKIQAHLKTLREEREKLLAFRMTGEERSKEYLKWTKAERQ
KILSGFQHLHQFLKEQEQLLLAQLEELEREIETIQKENITKMSKEISILNNLIKEMEGKC
LQPADAFLQDVRSTSSRCDRQMFQLPVEISPELEPKVRDVSCKTVAIMEILRTIKGTLTA
EMGKGWAILSSYTKVKVTLDPATAHPHLILAEDRSSMTRGDKLQKLPDNAERFDTHHCVL
GYDGFSAGRHYWEVEVEDGGFYAVGVARASVRRKGWSRLDPEAGIWAIWHLSGSYWTLTR
PPTHVMLNQVPRKIRVFLDYEEGQVAFFDAANGAPIFIFPKVSFAGERIHPWLWVWEREA
KLRLSGPGGLQSCSKTCPLNTGVLGAQPVDTLQSYLEKDSYSKVKVTLDPDSANPQLILS
EDRSCVRWEDTRQLLSKNSERFDMRCCVLGHEGFTSGRHCWEVEVRKGNSWAVGVARESV
KRKGWIHVSPEEGVWALGHWYGQFQVLTSPHPTPLQWLPSRVQVCLDYAEGQVSILNANT
KAPIFTFPPALFAGDRIHPWFYLFGPGAEFRLWN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaggaaccctgtagaaaatctccaggatgatacaacctgtttcatctgcctg
gagttcttcaaggacccagtgatgatcatgggctgtgggcacagcttctgccaagcctgc
atcagccagtgctgggagggaaaggaaaaagatgtctcctgccctcagtgcagactgacc
tttccacaaaggaacctgtgcccgaacaggctactggcaaattttgtcagtatagccaag
cagctgaaggcaccggcagccaatgaagcagaagagcagtggatgtgtaagaaacatggg
gaggccttgaaattgttttgtgatgaagatcaaatcctcctctgtgtagtgtgtgagaga
tcccaggctcatcaagctcacactgtggttcccataaaggaggctgcccgggaacacaag
gagaaaattcaggctcatttgaagactcttagggaagagagagaaaagctcttggcattc
agaatgactggagaggagagaagcaaggaatatctgaaatggacaaaagctgagaggcag
aaaattctgtctggatttcagcatttgcaccagtttctgaaggaacaggaacagctcctg
ctggcccagctggaagagttggagagggagatcgagacgatacagaaggaaaacatcact
aaaatgtccaaggagatttccattcttaataacctaatcaaggagatggaggggaagtgc
ttgcagccagcagatgcattcctgcaggatgtcaggagcacttcgagcaggtgtgataga
cagatgtttcagctgccagtggagatttctcctgagctggaaccaaaagtcagggatgtc
tcctgcaaaaccgttgccataatggagattctgaggacgattaaaggcactctgacagct
gagatggggaaaggatgggctatactgagctcatacacaaaggtgaaggtgactctggat
ccagccacggctcatccccacctcatcctggctgaggatcggagcagcatgacacgggga
gacaaactgcaaaaactgcctgacaatgcagagagatttgatacacaccactgtgtgctg
ggctatgatggattcagtgcaggaagacattactgggaggtggaagtggaggacggggga
ttttatgctgtgggggttgccagagcatctgtgcggaggaagggatggagcagacttgac
cctgaagcagggatctgggctatatggcacttgtcaggtagctactggactctcacccgc
cctccaactcatgtgatgctgaaccaggtccctagaaaaatccgtgtctttctggactat
gaagaagggcaagtggcattttttgatgctgctaatggagccccaattttcattttccca
aaggtttcatttgctggggagaggattcacccttggctttgggtctgggaaagggaagcc
aaacttagactctctgggcccggaggactgcagagctgctctaagacctgcccgttgaat
actggtgtcttaggagcacagcctgtagacactctgcaatcttatctggagaaggactca
tactccaaggtgaaggtgactcttgatccagactcggcaaatccccagctcatcctgtct
gaggatcgaagttgtgtgagatgggaagacacgcggcagcttctgtccaagaattctgag
agatttgacatgcgctgctgtgtgctgggccatgaaggattcacctcggggagacactgc
tgggaagttgaagtgcggaaagggaatagctgggccgtgggtgttgccagagagtctgtg
aagaggaagggatggatccacgttagcccggaggagggggtctgggctttgggacactgg
tatggtcagtttcaggtgctcacatcacctcatcccacgcccctgcagtggttgcccagc
agggtccaggtgtgcctggactatgcagaagggcaggtgtcaattctcaatgctaatacc
aaggccccgatcttcaccttcccaccggctttgtttgctggggacagaatccatccctgg
ttctacctgtttggccctggagctgaattcagactgtggaactga
DBGET
integrated database retrieval system
