Alligator mississippiensis (American alligator): 102566919
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Entry
102566919 CDS
T03087
Symbol
TRERF1
Name
(RefSeq) transcriptional regulating factor 1
KO
K26583
transcriptional-regulating factor 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102566919 (TRERF1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102566919 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
Myb_DNA-bind_7
zf-met
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
102566919
NCBI-ProteinID:
XP_006266090
LinkDB
All DBs
Position
Un
AA seq
1177 aa
AA seq
DB search
MGDQQLYKTNHTANSNDNLYYQHHQVNSLPALNHSYGTSIMDASQASPLSPQYPQDSRDG
IALTVGSKSLGSLDSSRPTSWTHSGAGNHVSVRNNLNSQNAMWSPLGQGESADGYQYPYS
PANEVRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMTQVLHAPSSVMDNVNDSALRQLL
SQKSSIEQQPATSTVQRYQQVPQQVHQSFASPQQKQQMQVMQHPQQLYYDYQQHLSQMQM
HSAVQPGQPHVQQLQSQQLLPQHLQHLQQSQYYLQQQPQQGQQRFSIQEMQQGQQLSRQQ
QQRQCPMQIAQYYQTQPAMQQLQPQQQMDLQLPYHRDPDPKTLHEAHQYSQDQSHPVQLI
QLGAVPQYCYQDPQQQYRHLYSQSLLQQQEQQQEDDTSQDKQYQSDNRSQALMNSHISLS
APEVIEDPTEQEINSVNNTLPHRTLLPPSGGHLNSKGAPQESPTAIWPQMQLSDGRLQPL
SPEQSDQNRGLFPEKANTKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPSFKQEESEK
PLQQQPPKEVDSLAPIVMPVSVPVKLLSPEPSTQPTTNSTTVKDKPANSVSDDEMPVLVK
MTYSPPCSPKVANPCSSSEVNRKPPLSASKLEENIKPLQDKKKYRHRPEPLFIPPPSFNF
PASYSGATLYQSQLRSPRILGDHLLDRAHELPPYTPPPMLSPVRQGSGLFSSVITSSHGA
SHPQLPLTPLTPTPRVFLCRSNSIDGNNVPVTPGPGEQTVDIEPRINIGSRFQADIPDLQ
DESLIEKDMHKATLVWKPWPELENKGFQQKVDTLLNMCCSSVLPGGGTNSEYALHSLFEA
KGDVMATLEMLLLKKQERTKCHPLANYHYAGSDKWTKPERKLFKDALSIYSKDFLFVQKM
VKSKTVAQCVEYYYTWKKIMRLGRKHRTRLEKKRDECLTSGEEEVLEDEEEVEEDRKCVK
EEESEIQKSPEPPPIPLAPIDLPPLQSLSLSAASFICEMPNCGAVFSSRQALNGHARIHG
GTNPMTKTRCTVSVIKQKSGTQSGHGSVKSSPAHSTTSGETDPTTIFPCKECGKVFFKIK
SRNAHMKTHRQQEEQQRQKAQKAAVATEMAATIARTTGPVGHGMIPLDHMDLIKHVEDLD
DDVVQELGNVMEENEVMEADLLLDDEDADLLQDDAEL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaaaactaaccacactgccaacagcaatgataacttgtac
taccaacaccaccaggtaaactctctccctgctttaaaccacagctacggaacatcaatc
atggatgcttctcaggcttcccccctctctccacagtatccccaggattcaagggacggt
atagctttgactgtaggttcaaaaagccttgggtcattggattcatcgcgaccaaccagt
tggacacattctggtgcaggaaaccatgtctcagtaaggaacaatttaaacagtcagaat
gcaatgtggagccctctagggcagggtgaatcagctgatggataccaatatccctactct
ccagctaatgaagttcgatcacagaaaatcacgagtggggttttacataaactagactcc
tttacgcaagtatttgctaaccaaaacttaagaattcaagtcaacaacatgactcaggtc
ttgcatgctccgtcttcagtgatggataatgtcaatgacagcgcattgagacaactgctg
tctcaaaagtctagcattgagcaacagcctgcaacttccactgtgcaaagataccaacaa
gtgccacagcaagtacatcagagttttgcaagcccacagcaaaagcaacaaatgcaagtc
atgcagcacccacagcagttgtattatgattaccagcaacacctctcccaaatgcagatg
cattctgcagttcagccaggccagccgcatgtgcaacaattgcagtcccagcagctgtta
ccacaacatttacagcatttacagcagagccaatattacctgcaacagcagccacagcaa
ggacagcagcggttttcaatacaagaaatgcagcaggggcagcaactaagtcggcagcag
cagcaaaggcagtgtccaatgcaaatagcacagtattatcaaacgcaacctgctatgcag
cagttgcagccacagcaacagatggacttgcagctgccttatcacagggatcctgaccca
aagactctgcatgaagcacaccagtattcccaggatcagtctcatcctgtacagcttata
cagttgggagcagtgcctcagtattgctaccaagatccacagcagcagtataggcatttg
tattcacagagcttactacaacaacaggagcagcaacaagaagacgacacgagtcaggat
aagcagtatcaaagtgacaacaggtctcaagctctgatgaactcccatattagcctctcg
gcaccagaggtaatcgaggatcccacagagcaggaaattaattcagtcaataatactctt
cctcatcgaactctgttaccaccatcaggtggccatctaaatagcaaaggagctccgcaa
gaatctcccactgccatttggcctcagatgcaactgtcagatggcagactgcaaccactg
tcccctgagcaaagtgaccagaacagaggattgtttcctgagaaagccaatacaaagaac
aagctaacatgctcaatatgcttgaaggaatttaagagtttaccagccctaaatggtcac
atgaggtcacatgggggagtaagagcctctccgagctttaaacaggaggaaagcgagaaa
ccactacagcagcaaccgcctaaagaggtggatagcctcgcgcccatcgtcatgcctgtt
tctgtccctgtaaagcttctgtcgcctgagcccagcacgcagcccactaccaacagtacc
acagtcaaagacaagcctgccaactctgtatcagatgatgagatgccagttctcgtgaag
atgacttactctccgccgtgcagtccaaaagtggccaatccctgctcatcttctgaagtc
aacagaaagcctcctctaagtgcttcaaaattggaagaaaacatcaaacccctgcaggac
aagaaaaagtatcgacatagacctgaacctctcttcatacctcctccttctttcaacttc
cctgcatcctactcaggtgctacactctatcaaagtcaactacgctctccccgcatccta
ggagaccatctgctggaccgggcacatgagcttcctccttacactccacctcctatgctt
agcccagtacggcaaggatccggtctcttcagcagtgttatcacctcgtctcatggtgca
tctcacccccaattgccactcacgcctctgacacccactccgcgggtcttcctgtgtcga
tctaatagtattgatggaaacaatgttccagtgactccagggcctggagaacagactgtt
gacatagaaccacgaatcaatattggttcacgattccaggctgatatccctgatctacaa
gatgaatctttaatagagaaagacatgcacaaggcaactttagtttggaagccatggcca
gaactggaaaataaaggcttccaacaaaaagtggacacccttttaaatatgtgttgttca
agtgtgttacctggtggaggaactaattcagagtatgctttgcactccctctttgaggcc
aaaggagatgttatggctactctagagatgctccttttgaagaagcaagaaagaacgaag
tgtcatcctttggcaaattaccactatgctggatctgacaagtggacgaaacccgaaaga
aagctttttaaggatgcactgtccatttacagcaaagattttctttttgtacagaaaatg
gttaagtctaagacagttgcacagtgtgtggaatactactatacttggaagaaaatcatg
cgtctgggacggaaacacagaacacgtttagaaaaaaagagagatgaatgcctgacaagt
ggagaagaggaggttttagaggatgaggaagaggtggaagaagacagaaaatgtgtaaaa
gaagaggaaagtgaaatacagaaatcccctgaaccaccacctatcccacttgcacccata
gacctgccaccccttcaaagtctctcactttctgcagcctcttttatctgtgaaatgcca
aactgtggtgctgtgttcagctccagacaagcactaaatggccatgcccgtattcatgga
ggtaccaatccaatgacaaaaacaaggtgtacagtttcagtcattaagcaaaaatctggg
acacagagtggacacggttcagttaaaagctcacctgcacacagcacaacaagtggtgag
acggacccaacaacaatttttccttgtaaagaatgtggcaaggtgtttttcaaaatcaaa
agtcgcaatgctcatatgaagactcacagacaacaggaagaacaacaaaggcaaaaggct
caaaaagctgctgttgcaacagaaatggctgctactattgcaagaactactgggccagtt
ggacatggtatgatccctctggatcatatggatttgattaaacatgtggaggaccttgat
gacgatgttgttcaggagttaggtaatgtcatggaagagaatgaagtcatggaagctgac
ctcttgttggatgatgaagatgcagacctgctgcaggatgatgccgagctgtaa
DBGET
integrated database retrieval system
