Alligator mississippiensis (American alligator): 102567063
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Entry
102567063 CDS
T03087
Symbol
COL14A1
Name
(RefSeq) collagen type XIV alpha 1 chain
KO
K08133
collagen type XIV alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
102567063 (COL14A1)
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Others
102567063 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
DUF4959
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
102567063
NCBI-ProteinID:
XP_019351250
LinkDB
All DBs
Position
Un
AA seq
1889 aa
AA seq
DB search
MKRMVCQYKRESWVLLAFLTVAAHFISCAQSQVAPPTRLRYNVVTPDSVQISWKAPKGQF
IGYKLLVTPTSGGKTNQLTLQNSATKAIIQGLIPDQTYSLQIIAFSKDQESKPAQGQFRI
KDIEKKKETSSKSKVKDKENLNGSKPSPAESQFTCKTPAIADIVILVDGSWSIGRFNFRL
VRLFLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNTYRTKEAVLDAVRNLPYKGGNTL
TGLALTYILENSFKPEAGARSGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKN
ADVNELREIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKALGTSVTTLG
APTELVTSELTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGNVSTAVLKNLMS
LTEYQIAVFAIYSNAASEGLRGTETTLALPMASDLQLYDVSHSSIKAKWNGVAGATGYMI
LYAPLTEGLAADEKEIKLGEALTDIELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLP
LSPPRNLRFSDIGHSTARITWDPASKHVNGYRIMYVKTDGAETNEVEVDRVSAHTLQSLT
SLTEYTVAIFSLYDEGQSEPLTGSFTTKKVPTPRYLEVNEVTTDSFRVSWKPTSSDVALY
RLAWIPLDGGESEEVVINGDKDTHLIEGLLPNTEYEVSLLAVFSDESESDVVAVLGTTLA
IATTVPTTITTASTTASKPTTAVFRTGIRNLIIDDETTSSLRVNWDISDYNVRQFRVTYL
AANSDRAEEAVMVPGRQNHILLQPLLSDTEYKVTVTPVYSDGEGVSVSTPGKTLPLSAPR
NLRVSDEWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGT
EYSVKVFASYSTGFSDALSGIAKTLPLSVTNLDAYQVRMTSLCAQWQLHRHATAYRIIIE
SLVDGKKREVTLGGGTPRHCFFELTPDTEYKISIYTQLHELEGPGISIMETTLPLPTQPP
TSPSTTPPPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIISFLYSTVGALDKIGP
DGTQVAIAQFSDDPRTEFKLNAYKAKETLLEAIQQIAYKGGNTKTGKAIKHAREALFTLD
SGIRRGIPKVLVVITDGRSQDDVNKISRDMQLDGFSIFAIGVADADYSELVNIGSKPSER
HVFFVDDFDAFKKIEDELITFVCETASATCPLVYKDGSSFSGFKMMEMFGLVEKEFSTVD
GVSMEPGTFNAYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRVLPDTPQEPFALWE
ILNEEYEPLVGVILDNGGKTLTFFNYDYKGDFQTGTFEGPEIRKIFYGSFHKLHVVISKT
TAKIIIDCKLVSEKTINASGNITSDGVEVLGRMVRSRGPRDNSAPFQLQMFDIACTTSWA
NRDKCCEIPALRDEENCPALPHACSCSEVSKGPLGPPGPPGGPGVRGPKGQRGDPGPKGP
DGPRGETGTPGPQGPPGPQGPSGLSIQGIPGPSGEKGEKGDLGPPGLQGVPGASGSPGRD
GTQGQRGLPGKDGPMGSQGPPGPVGIPGAPGAPGITGSPGPQGDVGPPGVPGTKGERGER
GDVQSHAMVRAVARQVCEQLIQGHMARYNSILNQVPSHTLSTRTVPGPPGEPGRPGSPGP
PGEQGSPGRPGFPGNPGQPGRPGERGLPGERGEKGSTGVGTQGPRGPPGPAGPSGESRTG
SPGPPGSPGPRGPAGHTGSPGPQGSSGPPGYCDPSSCAGYGVGGGYSDPTDQDIPVVQLP
HNSYQIYDPEDLYNGEQQPYVVHGSYPVPAPYSQAYPEPHLAQPEFTPVREEMEAVELRS
PGISRFPRKISKRSMNFPARKREIGKKNS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatggtttgtcaatacaagagagagagctgggtgctcttggcatttttaaca
gttgccgctcatttcatcagctgtgcccagagtcaagtggctccaccaacaagactaaga
tataatgtagttactcctgacagtgtacagatttcatggaaagcccctaaggggcaattt
atcggatataaacttcttgtcactccaacttcaggtggaaaaaccaatcagttaactctt
caaaacagtgctaccaaagcaattattcaaggtcttattccagatcaaacatactcactt
cagattattgcattcagtaaagaccaggagagcaagccagcccaaggccaatttcgaatt
aaagatatagagaaaaagaaggaaacatcaagtaaatccaaggtcaaggataaagaaaac
ttaaacgggagtaaaccatcaccagcagagagtcagtttacctgtaaaactccagcaatt
gcagacattgtgatccttgtcgatggttcgtggagtattggcagattcaatttcagactt
gttcggctgttcctggaaaacctggttactgctttcaacgtgggctctgagaaaacaaga
ataggtcttgcgcaatacagtggtgacccccgaattgaatggcatctgaatacataccgg
acaaaggaggctgttttggatgcagtccgtaatctgccctataaaggaggcaatacatta
acaggtcttgccttaacttacattttggagaacagctttaagcctgaggcaggtgcaagg
tcaggggtgtccaaaattggtatattgatcacagatggaaagtctcaagatgatgttatt
ccacctgctaaaaatctacgtgatgctggtattgaactatttgctattggtgtgaagaat
gcagatgtaaatgaactcagagagattgcctctgaacctgacagtactcatgtctacaac
gttgctgattttaacttcatgcataccattgtagaaggtcttacaagaactgtgtgttca
agagtggaggaacaggagaaggaaatcaaagctctaggaacatctgttaccacacttgga
gctccaacagagttggtcacatctgagctaacagccagaggatttcgtgttagctggacc
catgcaccaggcaaagtggagaaatacagagttgtgtattatcccacaagaggaggacag
ccagaagaggtggtggtagatggaaatgtatcaacagcagttctgaaaaacctgatgtct
ttaacagagtatcagatagctgtgtttgctatatattcaaatgctgcaagtgaaggactc
cgtggcacggaaactacacttgctttgccaatggcatctgatctacagctgtatgatgtg
tctcacagcagcataaaggcaaaatggaatggagttgcaggtgctacgggttacatgatc
ctatatgctcctctcacagaagggctggcagcagatgaaaaggagattaaattgggagag
gccttgacggatattgagctggatggattattgcctaacacagaatatacagtcacagtt
tatgccatgtttggagaagaagctagtgacccccttacagggcaagaaacaacattgccc
ttaagtccaccaaggaacttgagattttcagacattggacacagcactgcaaggataacg
tgggatcctgcttctaaacacgtaaatggttatcgtattatgtatgttaaaacagatgga
gcagaaaccaatgaggtggaagttgatcgcgtttcagcacacactctgcaaagtctgacg
tctcttacagaatatactgttgccattttctccctgtatgatgaaggacagtctgagcca
ctcactggcagctttactacaaaaaaagttccaacccctcggtacttggaagtaaatgaa
gtaacaacagatagtttccgagtcagctggaagcccacctcctctgatgtagcactgtac
agattggcctggattccccttgatggaggtgaatctgaagaggttgtcataaatggagac
aaggacacacaccttattgagggtttgttacccaatacagagtatgaagtttctttgctg
gcagttttcagtgatgaaagtgaaagtgatgttgttgctgttcttggaacgacacttgca
attgctactacagtacctactaccattactactgccagtactacagcatccaagcccaca
acagcagtgtttcgaactggaatcagaaacctcattatagatgatgaaactacctccagc
ctgagggtgaattgggatatttctgactataatgttcgccagttccgagtgacttacctt
gctgccaacagtgatcgagcagaggaagcggtaatggtacctggaagacaaaaccatatt
cttcttcagcctttgctctcagatactgaatataaagttactgttactcctgtatattct
gatggggaaggagtcagtgtctccactcctggcaagaccctgcctctctctgcccccaga
aatttaagagtctcagatgaatggtacaaccgattacgcattagctgggatgcccctccc
tccccaacaatgggttacaggattgtctacaaacctatcaacatccctggaccagcattg
gagacctttgtaggagatgatatcaacaccattctgattttaaatctattcagtggaaca
gagtacagtgttaaagtatttgcttcatattcaacaggcttcagtgatgccctgtcaggc
atagccaaaaccttgcccttgagtgtgaccaatctggatgcttatcaggtccgcatgact
agtctttgtgcccagtggcagcttcacagacatgccacggcatacaggatcattatagag
tctcttgtggatgggaaaaagagagaagtaacccttggtggagggacccctcgacactgc
ttctttgagctcacacctgacacagagtataaaatcagcatctatacacagcttcacgag
ctagaggggcctggcataagcataatggaaacaacattgccattgccaactcaaccacca
acttctccttcaacaacacctcccccacctacaattcctcctgcaaaagaagtgtgtaaa
gctgccaaagctgacctggtgttcttggtggatgggtcatggagcattggggatgacaat
ttcaacaaaataatcagctttctgtatagcactgttggagctttggacaagattggtcct
gatggaactcaggttgcaatagcacagttcagtgatgatcccaggacagaatttaaactg
aatgcctacaaagcaaaagaaactcttcttgaggccattcagcagatagcatataaggga
ggaaataccaaaacaggcaaagcaattaagcatgcacgggaagctttgtttacccttgat
tcaggcataagaaggggcatcccaaaggttctggtggttattactgatggacgatcacaa
gatgatgtgaacaaaatttccagagatatgcagctagatggtttcagcatttttgctatt
ggtgtggcagatgctgactattcagagttagttaatattggcagcaagcccagtgaaaga
catgtcttctttgtggatgattttgatgcctttaagaagattgaagatgagttgatcact
tttgtttgtgaaactgcatcagcaacttgcccgttggtgtataaggatggcagtagtttt
tcaggatttaaaatgatggaaatgtttggtttggttgaaaaggaattttcaacagtggac
ggggtttccatggaacctggtacatttaatgcttacccgtgttacagactgcataaagat
gcattggtttcccagcctaccaaatacctgcatccggaggggcttccttcagactatact
attacttttctattccgagtactccctgacacaccccaggaaccatttgctctttgggaa
attttaaatgaagaatatgagccactggtgggagttattttagacaatggtggcaaaact
ctgacattctttaactatgactataaaggggattttcaaactggtacttttgaagggcca
gaaataaggaaaatattttatggaagtttccataagttgcatgttgttattagcaagaca
acagccaaaataattattgactgcaagctagtgagtgagaagacaattaatgcatcaggg
aatattacttctgatggggtagaagttctggggagaatggtcagatccaggggcccaaga
gacaattctgcaccattccagttacagatgtttgacattgcttgtactacctcatgggcc
aatagagacaaatgctgtgaaattcctgccttgagagatgaggaaaattgcccagctctt
cctcatgcctgttcctgttctgaagtcagcaaaggaccacttggacctcctggacccccg
ggtggtccaggggttcgaggaccaaagggccaacgtggtgatccaggtccaaagggccca
gatggcccacgtggtgaaactggtactccaggacctcaagggcctccaggacctcaagga
ccaagtggactttctattcaggggattccaggaccatcaggagaaaaaggagagaaggga
gatcttggcccccctggcttacagggcgtcccaggagcgtcaggatcacctggacgggat
ggaactcaaggtcaaaggggcctgcctggcaaagatggacccatgggatcacaaggtcct
cctgggccagtgggaatacctggtgctccaggtgctccaggtattactggaagccccggg
cctcaaggtgatgttggacctcctggtgttccaggtacaaagggtgagaggggtgaacgg
ggcgatgttcaatcccatgccatggtgcgtgcagttgctcgtcaagtatgtgaacagctt
atccaaggtcacatggccaggtataattcaatcctgaaccaggttccaagtcacactctg
tcaacaagaactgttccaggacctcctggtgagccaggccgcccaggatctcctgggcca
ccgggagaacaaggatcaccaggaagaccaggatttccaggaaatcctggccagccagga
agaccaggagaaagaggtttgccaggcgagaggggagagaaaggcagtacaggggttgga
acacaaggacccagaggcccgccagggcctgcaggaccctcaggtgaaagccgaaccgga
agcccaggcccaccaggctccccaggtccacgaggaccagctgggcatacaggttcccct
gggccacagggttcttcaggtccacctggatactgtgatccttcttcctgtgctggttac
ggtgtgggaggtggatacagtgatccaactgatcaagacatacctgtagtgcaattgcca
cataactcctaccaaatctatgaccctgaggatctttacaatggtgagcaacagccgtat
gtagttcatgggtcctaccctgtaccagcaccatactcccaggcctatccagaacctcat
cttgctcaaccagaatttactccggttcgggaagagatggaagctgttgaattgagatcc
ccaggaattagccgcttccccaggaaaatatctaaaagaagtatgaactttccagcacgc
aagagggaaattggaaaaaagaactcttaa
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integrated database retrieval system
