Alligator mississippiensis (American alligator): 102568102
Help
Entry
102568102 CDS
T03087
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102568102 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102568102 (HDAC5)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102568102 (HDAC5)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102568102 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
102568102
NCBI-ProteinID:
XP_019331215
LinkDB
All DBs
Position
Un
AA seq
1119 aa
AA seq
DB search
MLLVPRALGLPEMLQTIYETESCFSSDGVSGCDQSLELLSRAQIHTLPVAVDVKPALPVA
MPNSSCSSIPVDLRTEARASLPSVDPTVREQQLQQELLALKQQQQLQKQLLFAEFQKQHE
HLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRKREQQRQEELEKQRLEQQLLILRNKEK
SKESAIASTEVKLKLQEFLLSKSKEPIAGSLNHSLPQHPKCWGAHHTSLDQSSPPQTGSP
GTPPSYKLPLLGTYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVIST
FKKRAIEITVSSVCNSAPGSGPSSPNSSNSTIAENGFTGSVPNIHTEQMLPQHRALTVDG
TASQLSLYTSPSLPNISLGLQATVTVTNSHLNASPKLSTQQEAERQAIQSLRQGGALTGK
FMSTSSIPGCLLGVALEGDTNSHGHSSLLQHVLLLEQARQQNTLIAVPLHGQSPLVTGER
ISTNMRTVNKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQQQQIQLGK
IITKTGELPRQPTTHPEETEEELTEQQEGPLEEPVPLGQGSFAVDGSTESESTQDDLEED
DGCVPLKDNAGESGAEEEHTEVQDVAYKQVFPDAQQLQPAQLYQVPLSIITLPHQALSRT
QSSPASSGMKSTGAEPPVKHLFTTGVVYDTFMLKHQCMCGNTNIHPEHAGRIQSIWSRLQ
ETGLLSKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVL
PCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVIRPPGHHAEESTA
MGFCFFNSVAIAAKLLQQKLNVGKILIVDWDIHHGNGTQQAFYSDPSVLYISLHRYDNGN
FFPGSGAPEEVGSGMGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIANEFSPDVVLV
SAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDASEACV
SALLSLELDPLDPAILQQKPNVNAVTTLEKVIEIQSKHWSSVKRYASVVSCSLLEAQKGE
AEEAETVSAMALLSVDAEQGSTDCNPRQVDEPMEAEPVL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgtgcccagagcactgggactgcctgagatgctgcagaccatttacgagact
gaatcatgtttctcttcagatggggtatccggatgcgatcagtcactggagctcttgtcc
cgggcgcagatccacacgctacctgtggcagtcgacgtgaagccagcgctgcctgtggcc
atgccgaactcctcctgcagtagcatcccagtggacctgcggacggaggcccgtgccagc
ctgcccagcgtggaccccacggtgcgggagcagcagctgcagcaggagctgctggccctg
aagcaacagcaacagctgcagaagcagctgctctttgcagaatttcagaagcagcatgag
cacctgacccggcagcatgaggtccagctgcagaagcacctcaagcagcagcaggagatg
ctggcggcaaaacggcagcaggagctggagcagcagcgcaagcgggagcagcagcggcag
gaggagctggagaagcagcggctggagcagcagctcctcatcctccgcaacaaggagaag
agcaaagagagtgccatcgccagcacagaagtgaagttgaagcttcaggagttcctgctc
agcaagtcaaaagagccgatagcaggcagcctcaaccattccctcccacagcaccccaaa
tgctggggagcccaccacacctcgttggaccagagttcccctccccagacaggaagcccg
ggaacaccgccatcctacaaactccccttgcttggcacctatgacagcagagacgacttc
ccgcttcggaaaacagcctccgaacccaatttaaaagtgcgctcacggttaaaacagaag
gtggcggagaggaggagcagtcccctgctgcgcaggaaagatgggaccgtcatcagcacg
ttcaagaagagagcaatcgagattacagtgtcctcggtgtgtaacagtgccccgggatct
ggccccagctcccccaacagctccaacagcaccatcgctgaaaacggcttcaccggctcc
gtgcccaacatccacactgagcagatgctgccccagcaccgagccctcactgtggatggg
acagcgagccagctcagcctgtacacctccccctcgctccccaacatctccctggggttg
caggccaccgtcaccgtgactaactcccaccttaatgcctccccaaagctctctacacag
caggaggcagagcgccaagccatccagtcactgcgccagggcggcgcgttgacgggaaag
ttcatgagcacctcatccatccctggctgcctgctgggggtggcgctggagggtgacacc
aacagccatgggcactcctccctgctccagcatgtcctgctcctcgaacaggcacggcag
cagaacacgctgattgctgtgccgctccatggccagtccccactggtgacaggtgagcgc
atctccaccaacatgcggacggtgaacaagctgccccggcatcgcccgctgagccgcacc
cagtcctcgccactgccccagagcccccaggccctgcagcagctggtcatgcagcagcag
caccagcagttcctggagaagcagaagcagcagcaacagcagcagattcagcttggcaag
atcatcaccaagacaggggagctgccccgccagcccaccacgcacccagaggagacggag
gaggagctgacagagcagcaagaagggccgctggaggagccggtgcccctggggcagggc
tcctttgctgtggatggctccacagagagcgagagcacgcaggacgacttggaggaggac
gatggttgtgttccactgaaggacaatgcaggcgagagtggggctgaggaggagcacact
gaggttcaggacgtggcctacaagcaggtgttccctgatgcccagcagctgcagcctgcc
cagctgtaccaggtgcccctgagcatcatcaccctgccgcaccaagcactgagccgcacc
cagtcctcgcctgcctcctcaggcatgaagagcactggagccgagcccccagtcaaacac
ctcttcactacaggtgtggtctatgacacattcatgctaaagcaccaatgtatgtgtggg
aacactaacattcaccctgagcatgctgggagaatccagagcatctggtccaggctccag
gagaccggcttgctgagcaagtgtgagcggatccggggcaggaaagccacgctggacgaa
atccagacagtgcattcagagcatcacacgttgttatacggaaccagccctctcaaccgg
cagaaacttgacagcaaaaagctgctgggtcccatcagccagaagatgtatgcggtgttg
ccctgtggaggcattggggtggacagtgacacggtgtggaatgagatgcactcatccagc
gcagtccgcatggctgtgggctgcttggtggagttggctttcaaggtggcctcaggagag
ctcaagaatgggtttgcggtcattcggcctccggggcaccacgctgaggagtcaactgcg
atgggcttctgtttcttcaactctgttgccattgctgccaagctgctccagcaaaagctc
aatgtgggcaaaatcctcattgtggactgggacatccatcatggcaatgggactcagcag
gccttctacagtgaccccagcgtgctctacatctccctacatcgctatgacaatgggaac
ttcttccccggcagtggggcccctgaggaggttggcagtgggatgggcgtggggtacaat
ataaacatagcttggacaggtggtgtggacccccccatcggagacgtggagtacctgact
gcattcaggacggtggtgatgccgatagccaatgagttctccccagatgtggtcctggtc
tctgctggctttgacgcagtcgagggacacctgtctcccctgggtggctattctgttact
gcgaaatgtttcggacacctgaccaagcagctgatgaagctggctggtgggcgtgtggtg
ctagccttggaaggggggcatgacctgacagccatttgtgatgcctcggaggcctgcgtc
tctgctctgctcagcttagagctggaccccctggacccagcgatcctgcagcaaaagcca
aatgtaaatgccgtgaccacgttggagaaggtcattgaaatccagagcaaacactggagc
tctgtgaagcgctatgcctctgtggtcagctgttccttgctggaggcccagaagggcgag
gcggaggaggccgagacagtaagtgccatggcattgctatcagtcgatgcagagcaagga
agcacagactgcaaccccagacaagtggacgagccgatggaggccgagcccgtgctgtga
DBGET
integrated database retrieval system
