Alligator mississippiensis (American alligator): 102568743
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Entry
102568743 CDS
T03087
Symbol
NUP98
Name
(RefSeq) nucleoporin 98
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102568743 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102568743 (NUP98)
03036 Chromosome and associated proteins [BR:
amj03036
]
102568743 (NUP98)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102568743 (NUP98)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102568743 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102568743
NCBI-ProteinID:
XP_019335694
UniProt:
A0A151M191
LinkDB
All DBs
Position
Un
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGTAGFGTTSTFGQNAGFGTTSGGAFGASAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATASLFGSSAATSSAATG
LFGSTTTNTGFSYGQNKTGFGTSTTGFGTGTTGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGNTSTLGQPNTNTMGLFGATQPTQSGGLFGTTANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPATFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGTNTAGTSL
FGNKPTTGSLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTSGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLSSSNLFSPVSREAEDLASPSEYPENGERFNFLSRSIDENHRQDGEPEEEDDHHE
VTRFYTNPIAKPIPQTPENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASYHEESLQ
DDREDETENMHHLHPAGIVLTKVGYYTIPSMEELAKLTNDRGECILTDFTIGRKGYGSIY
FEGEVNLTNLNLDEIVHIRRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCL
IKSPERLTDMNYEGRLEAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEEH
SAKADTKKLKTAPVPPQGQPVPQQMALNGKPAPPSQSPEVEQLGRVVELDSDMTDITQEP
AQDSMLEDVVTEDQEPVPASTHIASSLGINPHVLQIMKASLLADEEDLDLILDRHFGKQS
TKMDTSQEICSPRLPISALQGQKKRSSVGGLLQSKFASVSLLPSASLQDSRGPRTSSFGK
APPPAPWSVFSPLASVFTIPAAAPEPQMKTVGTRRQQGLVPLEKSITYGKGKLLIDMALF
MGRSFRVGWGPSWTLINCGDQVSEAKHLRNTSMEYGFLPAPVAPKSLSESSFKVHIEKLN
LEQKETEGDKQLYLLPLEIKLKHSTVHLDDYCPFIAPNPGVAAIHDYADWVREVSGDLAE
IENVVKHWGLTWTLCEAIWGNLKELEASLEDPSEYILTLERRKAFSRWLSQTAAGRIEEE
VSLSRHDNHIEAVFSYLTGKRISEACRLAQQSGDYRLALLLSQLVGSQEVRELLTMQLVD
WHRLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRCIAIHLWYLLPPTAS
ISKALGMYEAAFQNTLESEKYACCPLPPYLEGSGCALEEDDSANRPLRDVCFHLLKLYSD
RHYDLHQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSGQCQGVLNASYAAQLESKGL
WEWAIFVLLHTSNAHMREKAVRELLTRHCVLPETPESWTKEAFLTQKLCVPPEWIHEAKA
IRARMEGDKHKEALYLFRAGHWNQCHKLVIRHLASDAIINENYKYLKGFLEDLSPPERST
LIQDWDTAGLVYLDYIRVIEMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSAKDR
LAQSDMAKRIANLLRVVLSLQHSPEPASDSTPDVQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVVTQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccatttggaggcactgctggctttgggactacttca
acctttggacaaaatgccggctttggtactaccagtggaggagcatttggagcatcagcc
tttgggtcaaacaataatacaggaggcctctttgggagcacacagaccaaaccaggggga
ttgtttggttcgacaacatttaatcaaccagccacctcctccacaagcactggttttggg
tttgggacctcaactggaacttcaaacagcttatttgggacaaccagcactggtggaggt
ctcttttcatcccagaataatgcctttgcacagaataaaccagctgggtttggaaacttt
gggacaagtaccagcagtggaggtctctttggaaccactaacactacctccaatcctttt
gggagtacatctggctctctctttggcccaactagctttactgctgctccaactggcaca
actattaaatttaatccaccaactggcacagatactatggtaaaatctggagttagtact
aacatcagcaccaagcaccaatgtattactgctatgaaggagtatgaaagcaaatcctta
gaggaactccgtttggaagattaccaagcaaacaggaaagggccctcgaacccagtggga
gcaggagcaactgcaagtttatttggatcctctgcagccacatcaagtgctgctactgga
ctgtttggctccaccaccaccaacacgggcttttcctacggacagaataaaactggcttt
ggaaccagtacaactggctttggcacgggaacaactgggggtctctttggtcagcagcct
cagacaactagtctgttcaataaaccgtttggccaggccacgacaacacagaacaccggt
ttctcttttgggaacaccagcactcttgggcagccaaacacaaacacaatgggtttattc
ggggcaacccaacccacgcaatcaggaggcctttttggaacaactgccaacacaaatgct
ggtactggatttggaactggaactggtctctttggacaagccaacacaggattcggtgtt
gggggttcgaccctgttcggtaacaagcctgccacgtttggaaccaccacgaccagtgct
ccttcgtttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtacaaacactgctggcactagtctg
tttgggaataagcctacaactgggtctctgggaactggactcggaactggatttgggaca
gctcttggtgcaggtcagacttcattatttgggaacacccagcctaaactaggtgggacc
ctgggaaccggagcatttggagcaccgggattcaacacgtcaacggctactctgggcttt
ggagctcctcagcctgctgtggcactgactgaccccaatgcttcagcggcccagcaagct
gtccttcagcagcacctcaacagcttgacctattcacccttcggagattctcctctcttc
agaaaccccatgtcagacccgaaaaagaaagaagagagattgaaaccaaccaacccagcg
gcacagaaggctttgactacacccactcactacaaactgacccctcgtcctgcaactcga
gtgagacccaaagctctgcagacttcgggctcggccaaatctcacctctttgatggtctg
gatgatgatgagccctccctatccaacggtgctttcatgcccaagaagagcatcaagaag
ctggttttgaaaaacctcagcagcagtaacctgttttctcctgtcagtcgcgaagctgaa
gacttggcctctccatcagagtatccagagaacggagagcggttcaactttctgtcccgc
tctattgatgagaaccacagacaggatggtgagccagaggaagaggacgatcatcacgaa
gtgactaggttttacacaaaccccattgccaaacccatcccacagaccccagagaacgct
gtgcacaaacaccagaacagtgtggatgataccattgtggctctgaatatgcgggttgcc
ttgcgaaatggactggaaggcagcagtgaagatgcctcgtatcatgaagagtctctgcag
gatgaccgtgaagatgagactgagaacatgcatcatctgcacccagcaggaattgttctc
acaaaagtaggctactataccatcccgtctatggaggagctggccaagcttaccaatgac
agaggagagtgcatcttgacagatttcaccataggtcgtaaaggttatggatcaatttac
tttgaaggagaagtgaacctaactaatttaaatctggatgagattgtgcacatccgtcgg
aaagaagttattgtctaccctgatgatgaaaggaaaccacctgttggtgaaggtttaaat
aggcgagcagaggttacgttagatggagtttggccaacagataagacatctcgttgcttg
ataaagagccctgaacggctaacggatatgaattatgaaggcagactggaggccgtatct
cggaaacagggagctcagttcaaggagtaccgtccagagactggttcttgggtgtttaag
gtggctcatttctctaaatatggcctgcaagactctgacgaggaggaagaggaagagcat
tctgcaaaagcggacacaaagaagttaaaaactgctccagtgccaccccaggggcagcca
gtgccccagcagatggccctgaatgggaaaccagccccaccgtctcagagcccagaagtg
gaacagctggggagggtggtcgaactggacagcgatatgaccgacatcacccaggaacct
gcccaggactccatgctagaagatgttgtgaccgaagatcaggaacccgtgcctgcatca
acacacattgcatcctcactgggcataaacccccacgtgttgcagatcatgaaggcttcc
ttgctggctgatgaagaggatttagacttgatcctagatcgtcattttggcaaacagtct
acgaaaatggatacttctcaagaaatctgctctcccagacttccaatttcagctttgcaa
ggacagaagaagcgctcctcagttggtggattgctgcaatcaaaatttgccagtgtctct
ctccttccaagtgcctctttacaagattctcgtggaccaagaacttcctcttttggcaaa
gcccctcctccagcaccttggtctgtgttttccccgcttgcctctgtgttcaccatccct
gctgcagccccagagccacagatgaagacagtgggtacccgcaggcagcaggggctggtg
cctctggagaaatccattacctatggaaaaggaaaactcttgatagacatggcactcttc
atgggacgctcgtttcgggtcggctggggacccagttggactcttatcaattgtggagac
caagtgagcgaggcaaagcatcttcgcaacacatctatggaatacgggttcttgccagct
cctgtcgctcccaaatcgctttcagaatcgtccttcaaggttcacatagagaagctgaac
ttggaacagaaggagacggagggtgacaagcaattatacctcctacctctggagataaaa
ctgaaacacagcactgtccatttggatgattattgtcctttcatcgcccccaacccagga
gtggctgccattcacgactatgctgactgggttagagaggtctctggagaccttgcagaa
attgaaaacgtggtgaagcactggggtctgacgtggactctgtgcgaggcaatctggggc
aacctgaaagagttggaagccagtttggaggatcccagtgagtacatcctgaccctggag
cgcaggaaagccttctcgcgctggctatcgcagaccgcagccgggaggatcgaggaggag
gtctcgctctcgcggcacgataaccacattgaggctgtgtttagctacctcactgggaag
cggatcagcgaggcttgtaggttggcacaacagtcaggtgattacaggctcgctctactc
ctctcccagctggtgggcagccaggaggttcgggagctcctcaccatgcagttagtggac
tggcacaggctccaggcagactgcttcatccaggaagagaggttacgcatctttgctctg
cttgctggaaagccggtgtggcagttatctgagaggaaaagcattaatgtttgctcacag
ctggactggaagcgctgtatagctatccatctctggtacctgcttccacctacagcttcc
atttccaaggcacttggcatgtatgaggcagcgttccagaacacgctggagtccgagaag
tatgcctgctgtccccttcctccctatctagagggctcaggctgcgcgcttgaggaagat
gacagcgcaaacaggccgctgcgagatgtctgctttcatctgttaaagctctacagtgac
agacattacgatctccatcagctgctggaccccaggagtataacgtctgaccccttggac
taccgtctcagttggcacctgtgggaagtgctcagagccctgaattacacacatttatcg
ggacagtgtcagggagtgctgaatgccagctatgctgcccagctggaaagcaaagggctc
tgggaatgggccatctttgtgctgttgcatacctctaatgcacacatgcgtgaaaaggca
gtgcgtgagctcttaacccgccactgcgtgctgcccgagacgccagaatcctggacaaaa
gaagccttcctgacgcaaaagctctgtgttcccccagagtggattcacgaggcaaaggcc
attcgggcaaggatggagggagataagcataaagaggctctctacttattcagagctggg
cactggaaccagtgccacaagctggtcatcaggcacttagcctcagatgccattatcaac
gagaactacaagtacctgaaaggcttcctggaagatttgtcccccccagaacggagtacg
ctcatccaggactgggacacggcagggctggtttatttggactatatccgggtcattgag
atgctcgacaggattcagcagctggattgttccacgtatgagttggagagattacatacc
aaagtgacgtcgctatgcaataggatagaacagatacaatgccacagcgccaaggaccgg
ttggctcagtcagacatggccaagcgcatcgctaacctgctgcgggtggtgctgagcctg
cagcactctccagagcctgcctccgactccacgcccgacgtgcagcgagtccccctccgc
ctgctcgcgccccacattggccggctccccatgccggaggactatgccctggaggagctg
cgcggcctcacccagtcctacctacgggaactgacggtggtgacgcagtga
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integrated database retrieval system
