KEGG   Alligator mississippiensis (American alligator): 102570656
Entry
102570656         CDS       T03087                                 
Symbol
CDC27
Name
(RefSeq) cell division cycle 27
  KO
K03350  anaphase-promoting complex subunit 3
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04110  Cell cycle
amj04114  Oocyte meiosis
amj04120  Ubiquitin mediated proteolysis
amj04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102570656 (CDC27)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102570656 (CDC27)
   04114 Oocyte meiosis
    102570656 (CDC27)
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    102570656 (CDC27)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amj01009]
    102570656 (CDC27)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amj04121]
    102570656 (CDC27)
   03036 Chromosome and associated proteins [BR:amj03036]
    102570656 (CDC27)
Protein phosphatases and associated proteins [BR:amj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     102570656 (CDC27)
Ubiquitin system [BR:amj04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     102570656 (CDC27)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    102570656 (CDC27)
SSDB
Motif
Pfam: TPR_1 TPR_2 ANAPC3 TPR_8 TPR_12 TPR_17 TPR_11 TPR_19 TPR_16 TPR_14 TPR_6 TPR_9 TPR-S ChAPs PPTA ANAPC8 TPR_10 TPR_20 TPR_MalT TPR_21 Cas_Cas02710
Other DBs
NCBI-GeneID: 102570656
NCBI-ProteinID: XP_006271620
LinkDB
Position
Un
AA seq 839 aa
MTVLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRL
LKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVLNKQKSHEDIVTEFGDSSCFTLSL
LGHIYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKLTSLQNFSSCL
PNTCTTLVSNHNISHRQPDTVLMETPQDTIELNRLNLESSNSKYSSLNTDSSMSYIDSAV
ISPDTVPLGSGTAILSKQAQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSPGDGSYLQ
NYTNSSSVIDVPSTGAPSKKKFCIMQSVTRISQSGTKSVFSQSGNSREVTPILVAQTQSS
GPQTSTTPQVLSPTIAAPPNALPRRSSRLFTSDSSTTKENSKKLKMKFPPKIPNRKTKSK
TNKGGITQPNINDSLEITKLDSSIISEGKISTVTPQIQAFTLQKAAAGLMSLLRDMGKGY
LALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAYFELAEYMQAERIFSEVRRIENYRV
EGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRA
IQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSL
AEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAINIDPKNPLCKFHRASVL
FANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANN
QIKEAIDKRYLPDDEEPITQEEQISECYPYESVGTDESQESSMTDADDTQLHAVESDEF
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgacggtgctgcaggaacccgtccaggccgccatatggcaagcacttaaccactatgct
tatcgagatgcagtgttcctggcagaaaggctatatgcagaagtacattcagaagaggcg
ctgtttttactggcaacatgttactatcgctcaggaaaggcatataaggcatacaggctt
ctgaagggacatagctgtaccaccccacaatgtaaatatttgcttgcaaagtgttgcgtg
gacctcagcaagcttgcagaaggagaacagatcttatctggtggagtgctaaataaacag
aaaagccacgaagacattgttacggagtttggtgattcttcatgctttactctgtcacta
ctgggacatatatactgcaagacagacaggcttgccaaaggatcagaatgttaccaaaag
agccttagtttaaatcctttcctctggtccccctttgaatcactatgtgaaattggtgaa
aaaccagaccctgaccagacatttaaattaacatctttacagaacttcagcagctgcctg
cccaacacttgcacaacattggtgtctaaccacaacatatcccacagacagcctgacact
gtccttatggagacgccacaagacacaattgaattaaacagactcaacctggaatcctcc
aattcaaaatactcctccttgaacacagattcctctatgtcttacattgactcagctgta
atttcaccagataccgtccctcttggatcaggaactgccatattgtctaaacaggctcaa
aataaaccaaaaactggtcggagcttactgggaggaccagcagctttgagccccctgaca
ccaagttttggaattttgccgttagaaactccaagtcctggagatggatcatatttacaa
aactacactaattcatcttctgtaattgatgtgccatctacaggagcaccttcaaaaaag
aaattctgtattatgcagtctgtcaccaggataagccaaagcgggacaaagtctgtgttc
tcacagagtggaaatagccgagaagtcactccaatccttgttgcacaaacgcaaagttct
ggcccacagacaagtacaacacctcaggtattgagcccaactattgctgctccacctaat
gcactgcctagaagaagttctcgcctatttactagtgatagttctacaacaaaggaaaac
agtaaaaaattaaaaatgaagttcccacctaaaattccaaacagaaagacaaaaagtaaa
acaaataagggaggaataactcagccaaacataaatgacagtctagaaattaccaagcta
gactcttctatcatttcggaagggaaaatttccaccgtcacaccacagatccaggctttc
acgctacagaaagcagcggcaggtttgatgagccttcttcgtgatatggggaaaggttat
ttagccttgtgttcatacaactgtaaagaagcgataaatatattaagccatttaccttct
caccactacaacactggctgggtgctgtgccaaatcgggagagcttactttgagcttgcg
gagtatatgcaggccgaaaggatattctcagaagtaaggaggattgaaaactacagagta
gaaggcatggagatttattctacaacgctgtggcatctgcagaaagatgttgctctttct
gtcctttcgaaggatttaacagacatggataaaaattcaccagaggcgtggtgtgctgca
ggaaactgtttcagcttgcaacgagaacatgacattgcaatcaagttcttccaaagagcc
attcaagttgatccaaactatgcttatgcctatactctgctggggcatgagtttgtgtta
acagaagaactagacaaagcattagcttgttttagaaatgcaatcagagtcaatcctaga
cactataatgcatggtatgggctaggaatgatttattacaaacaggaaaaattcagccta
gcagaaatgcatttccagaaagcacttgatatcaatcctcagagctcagtcctactctgt
cacattggagtagtccagcatgcactgaaaaaatctgaaaaggctttggatacactaaat
aaagctattaatattgaccccaagaatccactatgcaaattccatagagcctctgtatta
tttgcaaatgaaaaatataagtctgctttacaagaacttgaagaactgaagcagattgtt
cccaaagaatctcttgtttacttcttaataggaaaggtttataaaaaattgggtcaaact
cacttggccctgatgaatttctcatgggcaatggacttagatcccaaaggagccaacaac
cagatcaaagaggctatcgataaacgctatcttccagatgatgaggaaccaataactcaa
gaagagcagatcagtgaatgctatccatatgagtcagttggcacagatgaatcccaagag
agcagcatgacagatgcagatgatacacaactacatgcagttgaaagtgatgaattttaa

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